New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2038432 =23 (1.040)9 (0.460) 4/134 2.2 24.2% coding (517/822 nt) wbbB putative glycosyltransferase WbbB
?REL606 2038941 = 36 (1.820)coding (8/822 nt) wbbB putative glycosyltransferase WbbB

GACTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAA  >  REL606/2038357‑2038506
                                                                           |                                                                          
gACTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACt                                                                            >  2:237900/1‑76 (MQ=255)
  cTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaa                                                                          >  1:148505/1‑76 (MQ=255)
   ccgctctttcaactcattgtatggcttctttgttatcaccttcaatcaattgggatgatttataatggattgTaaa                                                                         >  1:278100‑M1/73‑76 (MQ=255)
    aCGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaaa                                                                        <  1:560627/76‑1 (MQ=255)
     cGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaaaa                                                                       >  1:401972/1‑76 (MQ=255)
      gAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTaaaaaa                                                                      <  1:209961/76‑1 (MQ=255)
                       cTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCAt                                                     >  1:239333/1‑76 (MQ=255)
                           cttCAATCTGCATTCCCCATTTGGGGTCAATAATATCTATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTa                                                 >  2:40840/2‑76 (MQ=255)
                               aaTCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCaa                                             <  2:283307/76‑1 (MQ=255)
                                        tCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACAAACAatt                                    <  1:460848/76‑1 (MQ=255)
                                              tttGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTAttttt                              <  1:164526/76‑1 (MQ=255)
                                               atcaattgggatgatttataatggattgTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTg                             <  2:213200‑M1/48‑1 (MQ=255)
                                                tGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGc                            <  1:628834/76‑1 (MQ=255)
                                                   attgggatgatttataatggattgTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACCATTATTTTTGCAGa                         <  2:421853‑M1/52‑1 (MQ=255)
                                                   attgggatgatttataatggattgTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGa                         <  2:421857‑M1/52‑1 (MQ=255)
                                                      cAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGAttt                      >  1:192888/1‑76 (MQ=255)
                                                        ataataTCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGAttttt                    >  1:295572/1‑76 (MQ=255)
                                                        ataataTCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGAttttt                    >  1:295573/1‑76 (MQ=255)
                                                         atgatttataatggattgTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTCTTTTTGCAGATTTTTc                   <  2:507923‑M1/58‑1 (MQ=255)
                                                         atgatttataatggattgTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTc                   <  2:507917‑M1/58‑1 (MQ=255)
                                                         atgatttataatggattgTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTc                   <  2:507930‑M1/58‑1 (MQ=255)
                                                         atgatttataatggattgTAAAAAAATATTTTGGAAGATCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTc                   <  2:382259‑M1/58‑1 (MQ=255)
                                                                aatatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATttatt            >  2:47372/1‑76 (MQ=255)
                                                                 atatcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATttatta           >  1:182040/1‑76 (MQ=255)
                                                                    tcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCa        >  1:23536/1‑76 (MQ=255)
                                                                    tcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCa        >  1:23531/1‑76 (MQ=255)
                                                                    tcaTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCa        <  1:115862/76‑1 (MQ=255)
                                                                     caTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCAt       <  1:27403/76‑1 (MQ=255)
                                                                     caTTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTNCATTTATTAGCAt       <  1:485174/76‑1 (MQ=255)
                                                                        ttgTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACa    <  2:345220‑M1/73‑1 (MQ=255)
                                                                        ttgTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACa    <  2:345221‑M1/73‑1 (MQ=255)
                                                                          cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa  <  2:337887/76‑1 (MQ=255)
                                                                          cTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACaaa  <  1:279527/76‑1 (MQ=255)
                                                                           |                                                                          
GACTACGAATAAATTCTCTCAGTCTTGATTCAATCTGCATTCCCCATTTGGGGTCAATAATATCAATATCATTACTAAAAAAATATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAA  >  REL606/2038357‑2038506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.