| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039335 = | 20 (0.900) | 3 (0.150) | 3/138 | 2.6 | 13.2% | coding (360/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039563 = | 21 (1.030) | coding (132/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTATCAATTTTTCCAACTCGACGATCTTCATCTACTAG > REL606/2039260‑2039409 | cggcctgagtggtttagtcatgaaaattgttttataaatcttataaatacaataaaagaatctaaatataaagacc > 2:539064‑M1/76‑76 (MQ=255) gccagagtggtttagtcatcaaaaatgttttataaatcttataaatacaataaaagaatctaaatataaagaccac > 2:655857‑M1/74‑75 (MQ=255) cctgagtggtttagtcatggaaattgttttataaatcttataaatacaataaaagaatctaaatataaagacCaaa < 1:435767‑M1/4‑1 (MQ=255) cctgagtggtttagtcatgaaaattgttttataaatcttataaatacaataaaagaatctaaatataaagacCaaa < 1:435769‑M1/4‑1 (MQ=255) aaGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCaaa < 2:84462/76‑1 (MQ=255) gTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAaataat > 1:180837/1‑76 (MQ=255) gCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCAt < 1:218596/76‑1 (MQ=255) gCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCAt < 1:218605/76‑1 (MQ=255) tatCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTc > 1:697298/1‑76 (MQ=255) ccATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTaaa < 1:25174/76‑1 (MQ=255) tCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTaaaaaa < 1:218786/76‑1 (MQ=255) cTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAat > 1:187542/1‑76 (MQ=255) cTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAat > 1:230757/1‑76 (MQ=255) cTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAat > 1:230747/1‑76 (MQ=255) ttgatttgaCCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTaa < 1:23771/76‑1 (MQ=255) gatttgaCCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAAt < 1:331793/76‑1 (MQ=255) tgaCCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCAtt < 1:694275/76‑1 (MQ=255) tgaCCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCAtt > 2:372637/1‑76 (MQ=255) aaatcttataaatacaataaaagaatctaaatataaagacCAAATAATCATTTTCTAAAAAATATATTAAATCAtt < 2:460494‑M1/36‑1 (MQ=255) aCCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCAtttt < 1:361375/76‑1 (MQ=255) aaGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTAt < 1:543262/76‑1 (MQ=255) aaGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTAt < 2:537607/76‑1 (MQ=255) tacaataaaagaatctaaatataaagacCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTATCAAtttt < 2:355284‑M1/48‑1 (MQ=255) aataaaagaatctaaatataaagacCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTATCAATTTTTcc < 2:356797‑M1/51‑1 (MQ=255) ctcATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTATCAATTTTTCCa > 1:443304/1‑76 (MQ=255) ctcATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTATCAATTTTTCCa > 1:443308/1‑76 (MQ=255) gCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTATCAATTTTTCCAACTCGACGATCTTCATCTACTAg > 1:629204/1‑76 (MQ=255) | ATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAAATATATTAAATCATTTTTATCAATTTTTCCAACTCGACGATCTTCATCTACTAG > REL606/2039260‑2039409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |