| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1519016 | 56 (2.530) | 6 (0.300) | 4/138 | 2.3 | 11.5% | coding (850/957 nt) | yddK | hypothetical protein |
| ? | REL606 | = 1519475 | 41 (2.020) | coding (391/957 nt) | yddK | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTAATACTTACATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGATGTGAAGTTTTGCAG > REL606/1519401‑1519547 | tgtAATACTTACATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGt < 1:576013‑M2/76‑2 (MQ=255)tgtAATACTTACATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGt < 1:296774‑M2/76‑2 (MQ=255) tAATACTTACATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGtct > 2:200590‑M2/1‑73 (MQ=255) ttACATTTCTGCCTTGAGGCAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTa > 1:255120/1‑76 (MQ=255) tACATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAg > 1:610549/1‑76 (MQ=255) tACATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAg > 2:260831/1‑76 (MQ=255) aCATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAgt > 1:256445/1‑76 (MQ=255) aCATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAgt > 1:235754/1‑76 (MQ=255) ctgtCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTCCTATCCAGACTTAGCTTTACGAGTCTATCGTAgttg < 2:403860/73‑1 (MQ=255) aTTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAgttg < 1:677944/76‑1 (MQ=255) tCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAgttggtt < 2:419792/76‑1 (MQ=255) cTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAgttggttg < 2:370003/76‑1 (MQ=255) tGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGc > 2:695191/1‑76 (MQ=255) tGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGc < 2:44470/76‑1 (MQ=255) gCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCa > 2:197495/1‑76 (MQ=255) ccTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGtctatcaaaagtttaagact > 2:247218‑M2/1‑56 (MQ=255) ccTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGtctatcaaaagtttaagact > 2:247213‑M2/1‑56 (MQ=255) ttGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCa > 1:280374/1‑76 (MQ=255) tGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCaa < 1:144588/76‑1 (MQ=255) gAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCaaa < 2:30105/76‑1 (MQ=255) aGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCaaaa < 1:134608/76‑1 (MQ=255) ggAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAAt < 2:661404/76‑1 (MQ=255) aTTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAAtgtgtg < 2:558438/76‑1 (MQ=255) tATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGt > 1:683430/1‑76 (MQ=255) ttGACTGAATAGCATTACTATTCAGACTTAGCTTTACGAGtctatcaaaagtttaagactggacaataataaaata > 2:387281‑M2/1‑40 (MQ=255) ttGACTCAAGAGCATTACTATTCAGATTTAGCTTTACGAGtctatcaaaagtttaagactggacaataataaaata > 2:387294‑M2/1‑40 (MQ=255) gACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGtctatcaaaagtttaagactggacaataataaaataac > 2:50845‑M2/1‑38 (MQ=255) gACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGt > 2:703734/1‑76 (MQ=255) aCTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGtt < 2:232366/76‑1 (MQ=255) cgcAAGAGCGTTACTATTCAGGCTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGtta < 1:711086/74‑1 (MQ=255) cAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGttatt > 1:489332/1‑76 (MQ=255) agCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCa > 1:554944/1‑76 (MQ=255) agCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCa < 2:288307/76‑1 (MQ=255) gCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCaa > 1:391662/1‑76 (MQ=255) cATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAg > 2:667561/1‑76 (MQ=255) tATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTtat > 1:209629/1‑76 (MQ=255) caTTCCGGCTTAGCGTTTTCAGTCTATCCTAGTTGGTTGCATCGAAATGTGTGAATTGGTTATTATCGATATTtag < 2:33536/75‑2 (MQ=255) aTTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTtata < 1:703734/76‑1 (MQ=255) aTTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTtata < 2:256445/76‑1 (MQ=255) cAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGAt > 1:317543/1‑76 (MQ=255) aGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGAtg > 2:447970/1‑76 (MQ=255) ctttagTTTTAGGAGtctatcaaaattttaagcctggacaataataaaataacccacattgatactaataatacat > 2:271243‑M2/3‑15 (MQ=255) aCTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGAtgtg > 1:71633/1‑76 (MQ=255) ttAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGATGTGaa > 2:441400/1‑76 (MQ=255) aGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGATGTGAAGt > 1:662142/1‑76 (MQ=255) gCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGATGTGATGtt < 1:607218/76‑1 (MQ=255) tttACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGATGTGAAGtttt < 1:356191/76‑1 (MQ=255) tttACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTA‑TATCAAGATTTATAGATGTGAAGTTTTg > 2:199997/1‑76 (MQ=255) tACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGATGTGAAGTTTTGc < 1:494425/76‑1 (MQ=255) cGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGATGTGAAGTTTTGCAg > 1:602122/1‑76 (MQ=255) | TGTAATACTTACATTTCTGCCTTGAGGAAAATTTATTGACTCAAGAGCATTACTATTCAGACTTAGCTTTACGAGTCTATCGTAGTTGGTTGCATCAAAATGTGTGAGTTGGTTATTATCAAGATTTATAGATGTGAAGTTTTGCAG > REL606/1519401‑1519547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |