| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | REL606 | 2,058,079 | C→A | P291P (CCG→CCT) | wcaI ← | predicted glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 2,058,079 | 0 | C | A | 100.0% | 59.3 / NA | 17 | P291P (CCG→CCT) | wcaI | predicted glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (8/9); total (8/9) | |||||||||||
GCCGCGTTTTTGCACCACCAGATGGCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGCGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGCCGCGCTTTGCCGCCGCCCT > REL606/2058007‑2058149 | gccgcgTTTTTGCACCACCAGATGGCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAggg < 2:598602/76‑1 (MQ=255)gccgcgTTTTTGCACCACCAGATGGCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAggg > 2:150395/1‑76 (MQ=255) gTTTTTGCACCACCAGATGGCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAGGGaaaaa < 1:240425/76‑1 (MQ=255) tGCACCACCAGATGGCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCa > 1:49925/1‑76 (MQ=255) caccaGATGGCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCATGTTg > 1:6981/1‑76 (MQ=255) accaGATGGCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCATGTTgc < 2:17093/76‑1 (MQ=255) gCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCa < 1:97129/76‑1 (MQ=255) taaTCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCAc > 1:396620/2‑76 (MQ=255) cAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCAc < 2:500825/76‑1 (MQ=255) tGCGGGTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTcc < 1:60097/76‑1 (MQ=255) tGCGGGTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCATCTTGCGCAGTCCACGCTGCTGCGCCATTCTTTcc > 2:542153/1‑76 (MQ=255) gggTAAAGCGTCATACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGc < 1:623827/76‑1 (MQ=255) gTCATACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGCCGCGCTTTg < 2:181895/76‑1 (MQ=255) gTCATACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGCCGCGCTTTg < 2:567818/76‑1 (MQ=255) cATACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGCCGCGCTTTgcg > 1:195027/1‑75 (MQ=255) tACGATTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGCCGCGCTTTgccgc > 2:656453/1‑76 (MQ=255) aTTGCAGAGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGCCGCGCTTTgccgccgcc > 1:65866/1‑76 (MQ=255) tGCAGAGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGCCGCGCTTTGCCGCCGCCCt > 1:543511/1‑76 (MQ=255) | GCCGCGTTTTTGCACCACCAGATGGCAATCGCCCATCTTCAGCAGTGCGGGTAAAGCGTCATACGATTGCAGCGGGAAAAATTGCATGTTGCGCAGTCCACGCTGCTGCGCCATTTTTTCCAGCCGCGCTTTGCCGCCGCCCT > REL606/2058007‑2058149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |