| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,604,344 | 0 | C | T | 48.9% | 39.1 / 63.4 | 88 | S62F (TCT→TTT) | bglJ | bgl operon transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base C (13/32); new base T (43/0); total (56/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.94e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGAC > NC_000913/4604198‑4604492 | cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttttttt > 1:974762/1‑151 (MQ=255)cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttttttt > 2:830097/1‑151 (MQ=255) aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCCGCGGTCTGTTTTTTTTTTTTTACCaag > 2:838107/1‑149 (MQ=255) cGTCATGATTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATgaga < 2:60715/151‑1 (MQ=255) cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATtttttcttttttttccctggga > 2:67501/1‑140 (MQ=255) gTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTTCCCTGAGaa > 1:925501/1‑151 (MQ=255) tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAg < 1:975564/151‑1 (MQ=255) aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTg < 1:510973/151‑1 (MQ=255) gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTGATTTTTTTTTTTTCTGCCCTGCGAAGTgcg > 1:53269/1‑149 (MQ=255) gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAg > 1:676935/1‑151 (MQ=255) gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTTCCATGAGAAGTGAg > 1:172489/1‑151 (MQ=255) gtagtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTCTTTTTTTGCCATGAGAAGTGAgcg > 1:308448/1‑151 (MQ=255) gtagtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGGGAAGTGAgcg > 2:779766/1‑151 (MQ=255) gtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTTCCCTGAGAAGTGGGCGCag > 1:42002/1‑151 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTTCTTTTTTTTTTTTTTGCCATGGGAAATGGGCGGCGGGAggg > 1:605870/1‑151 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAgg < 2:580971/150‑1 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTTTTTTTCTGCCCTGGGAAGGGAgggccggggggg > 2:762171/1‑143 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGTGAggggt > 1:277902/1‑149 (MQ=255) tGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTa < 2:67014/151‑1 (MQ=255) tGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTa < 2:925828/151‑1 (MQ=255) tGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTa < 2:159914/151‑1 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCCTGGGAAGGGAGGGCAGAGAGGGGtttttt > 2:382220/1‑147 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGGGAGGGGtttt > 2:310190/1‑147 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTTCCATGAGAAGTGAGGGCAGAGGGGGATTA‑t > 2:718924/1‑149 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCGTTTTTTTTTTTTTTGCCCCGCTGAAAGTGCGCAGAGAGGGGTTA‑t > 1:842715/1‑149 (MQ=255) agTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTTATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑Tc < 2:903883/149‑1 (MQ=255) gTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGTCATGAGGAGTGAGGGCAGAGAGGGATTA‑TTTTg > 1:245213/1‑151 (MQ=255) tATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCATGGGAAGGGAGGGGAGGGGGGGAGTT‑TCtttc > 2:567654/1‑147 (MQ=255) aaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AAc < 1:718664/151‑1 (MQ=255) cGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTTTTTTTTTGCCATGAGGAGGGAGCGCAGGGGGGGGTTA‑TCTTGCCTGACTG‑AACT‑GGC‑ggt > 2:1002121/1‑149 (MQ=255) gggTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTTCCCTGAGAAGTGAGAGCAGAGAGGGGTTT‑TCTTTCCTGTCTG‑AACT‑GGC‑gggt > 1:21135/1‑148 (MQ=255) cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCCGAGAGGGGTTT‑TTTTTCCTTACTG‑AAAT‑GGC‑GG‑TTAAGgtt > 2:660347/1‑151 (MQ=255) cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTGCCATGGGAAGTGTGCGCTGAGAGGGGTTT‑TCTTGCCTTACTG‑AACT‑TGC‑GG‑TTAAGttt > 2:381787/1‑151 (MQ=255) cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTCTTCCCTGGGGAGGGAGCGCCGGGGGGGGTTT‑TTTTGTCTTATTG‑GACT‑TGG‑GG‑TTAAGgtt > 2:633017/1‑151 (MQ=255) cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGGTTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGttt > 1:1053012/1‑151 (MQ=255) cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGGGAGCGCAGAGAGGGGGTA‑TCTTGCCTTACTT‑AAAT‑GGC‑GG‑TTTAGttt > 2:406893/1‑151 (MQ=255) cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCCTGAGGAGTGGGCGCAGAGAGGGGTTA‑TCTTTCCTGACTG‑AACT‑GGC‑GA‑TTTAGttt > 1:803220/1‑151 (MQ=255) ccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGGTTA‑TCTTGCCTTACTG‑AACT‑GGC‑GA‑TTTAGtttt > 1:269131/1‑150 (MQ=255) cTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGTGAgc > 1:394209/1‑105 (MQ=255) cTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCCTGAGAAGGGAGCGCCGGGAGGGGTTT‑TCTTTCCTGGCTG‑AACT‑GGC‑GG‑TTAAAtttt > 2:127545/1‑149 (MQ=255) cTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAgc < 2:394345/105‑1 (MQ=255) tataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTTAGAAGGGGGGGCAGGGGGGGGTTA‑TTTTTCCTTGCTG‑TACT‑TGG‑GA‑TTTAGGTTTcg > 2:889720/1‑150 (MQ=255) tataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAAGGAGGGCAGAGGGGGATTT‑TCTTGCCTGATTG‑AAAC‑GGG‑GA‑TTAAGTTTTcg > 2:687619/1‑150 (MQ=255) gCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCTATTTTTTTTTTTTCTTCCCTGCGGAGTGAGGGCAGAGGGGGGTTA‑TCTTTGCTCAATT‑AACT‑GGG‑GA‑TTTAGTTTAcgccgac > 1:52552/1‑146 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAGGGCAGAGAGGGATTA‑TTTTGCCTGACTG‑AACT‑GGC‑GA‑TTAATGTTCcgccggcc > 1:558378/1‑145 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGGATA‑TCTTTCCTGCCTG‑AACT‑GGC‑GA‑TTAAGTTTCCCCGT‑A‑cc > 1:368349/1‑150 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGGTTA‑TTTTTCCTTACTT‑AACT‑GGC‑GG‑TTAAGGTTTCGCGG‑A‑cc > 1:801274/1‑150 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGAt < 2:106811/109‑1 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑c < 1:887735/149‑1 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTTTTTTTTTGCCCTGAGAAAGGAGCGCAGAGAggggt > 1:106796/1‑107 (MQ=255) ccATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATTAGAAATGAGGGCAGAGAGGGGTTT‑TTTTTCCTTACTG‑AACT‑GGC‑GG‑TTAAGGTTTCGCGG‑A‑ccccg > 1:994264/1‑149 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCTGTTTTTTTTTTTTTTCCATCAGAAGTGGGGGCAGAGAGGGGTTT‑TTTTGCCTGGCTG‑AAAA‑TGC‑GATTTAATTTTCTTCGT‑‑‑CCCGGCGt > 2:999470/1‑151 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCATGAGAAGGGAGCGCAGAGAGGGGTTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTTCGCGT‑A‑CCCGGCGt > 1:990648/1‑151 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTCTTTTTTTGCCCTGAGAAGGGAGCGCCGAGAGGGATTA‑TCTTGCCTTTCTG‑AACT‑GGC‑GG‑TTTAGGTTTCGCGG‑A‑CCCGGCgg > 2:126908/1‑150 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGGGAGGGCAGAGAGGGGTTA‑TCTTGTCTGACTG‑AACT‑GGC‑GA‑TTAAATTTCCGCGTCA‑CCCgcgg > 1:286285/1‑148 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGGGAAGGGGGGGCAGGGAGGGATTT‑TTTTGCCTGAATT‑AACA‑GGC‑GG‑TTAAGATTCCGCGG‑A‑ACCGGCgg > 2:389529/1‑150 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGGGCAGAGGGGGGTTA‑TTTTGCCTGACTG‑AACT‑GGG‑GG‑TTAAATTTTCGCGG‑A‑CCCGGCgg > 2:119829/1‑150 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGt < 1:278403/151‑1 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGGATTTTTTTTTTTTCTGGCCTTAGAAGTGAGCGCCGGGAGGGGTTA‑TATTTCCTCTATG‑TACA‑TGC‑GA‑CTAAGTTTCCGCGT‑C‑CCCGGCGt > 1:602177/1‑151 (MQ=255) aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGTATTTTTTTTTTTTCTGCCATGAGGAGGGAGCGCCGAGGGGGATTT‑TTTTTTCTTACTG‑TACT‑TGG‑GA‑TTTAGTTTTCGCGG‑A‑CCCCGGGtt > 2:178054/1‑151 (MQ=255) ccTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCTTTTTTTTTTTTTTTGCCATGAGAAGTGGGGGCAGAGAGGGGTTA‑TTTTGCCTGACTGAAACG‑GGG‑GT‑TTAAG‑TTCCGCGTAA‑CCCGGGGtt > 2:472765/1‑151 (MQ=255) ccTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTGGCCTGAGAAGTGAGCGGAGAGAGGGGTTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑GTAAGGTTCCGCGG‑A‑CCCGGCGttt > 1:215174/1‑151 (MQ=255) cTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCCTGAGAAGGGGGGGCCGGGAGGGGTTATTTTTGCCTG‑CTG‑AACTGGGG‑GT‑TTAAGTTT‑CGCGG‑A‑CCCgggggttt > 2:439531/1‑145 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGt < 1:1009451/151‑1 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGt < 1:323617/151‑1 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGt < 1:386632/151‑1 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGt < 1:579561/151‑1 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCCTTTTTTTTTTTTTTTCCCTTTGAAGGGAGGGCAGAGGGGGGGTT‑TTTTGTCTGTCTG‑AACT‑GGC‑GA‑TTAAGTTTTCGCGG‑ACCCCGGGGTTTat > 1:327848/1‑150 (MQ=255) ccAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCGCGTTTGCGGCGGTCTTTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGtctg < 2:189764/151‑4 (MQ=255) aGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGGGAAGGGGGGGCAGGGGGGGGTTT‑TTTTTCCTGACTG‑AACT‑TGC‑GG‑TTAAGGTTTCGCGG‑A‑CCCGGCGTTTTGTTTTTg > 2:1004828/1‑151 (MQ=255) tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTg < 2:542221/149‑1 (MQ=255) tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCg < 2:796289/151‑1 (MQ=255) ggAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCAAGGGAAGTGGGCGGCGAGGGGGTTTT‑TCTTTTCCTACTT‑AACT‑TGC‑GG‑GTAAGTTTCCGCGT‑A‑CCCGGCGTTTTGTTTTTGCgggt > 2:391675/1‑149 (MQ=255) tttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGGGAGCGCAGAGAGGGGTTA‑TTTTGTCTGTCTG‑AACC‑GGCGGT‑TTAGGTTTCCG‑GT‑A‑CCCCGCGTTTTTGTATTTCGGGTGATGata > 1:907148/1‑151 (MQ=255) ttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGatat < 2:327947/151‑1 (MQ=255) ttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGatat < 1:524077/151‑1 (MQ=255) ggtGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑ACTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTg < 2:143996/146‑1 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCATGAGGAGTGAGCGCCGAGAGGGGTTA‑TCTTTCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCCCGG‑A‑CCCGGCGTTTTGTTATTTCGGATGATGGTATTGAAg > 1:729742/1‑150 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGGGCAGAGGGGGGTTT‑TTTTGCCTGTCTG‑AAAT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCCGCGGTTTGTTTTTGCGGGTGGTGATATTGAAg > 2:795473/1‑150 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAg < 1:732073/150‑1 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAg < 2:505336/150‑1 (MQ=255) tGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCt < 1:112581/151‑1 (MQ=255) aTGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCgga < 2:392116/151‑2 (MQ=255) aTGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCCTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGc < 1:112804/151‑1 (MQ=255) gTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGGGCAGAGAGGGGTTA‑TCTTTCCTGACTG‑AAAT‑GGC‑GA‑TTAAGTTTTCTCGG‑A‑ACCCGCGGTTTGTTTTTTCGGATGATGATATTGAAGc > 1:524215/1‑144 (MQ=255) gTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGc < 2:524446/144‑1 (MQ=255) gATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCAAGAGAAGGGAGCGCAGAGGGGGGTTT‑TCTTGGCTTTCTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑ACCCGCGCTTAGTTATTTTCGGTGATGTAATTGAAACGCGGCCGATTTGt > 1:286289/1‑151 (MQ=255) tttGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGt < 1:472576/151‑1 (MQ=255) tttGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGt < 2:573818/151‑1 (MQ=255) cggcggTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGcc < 2:893905/151‑1 (MQ=255) cATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGGGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTTTTCATCACCg > 2:458516/1‑151 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGAc < 1:779496/151‑1 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGAc < 1:761906/151‑1 (MQ=255) | CATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTA‑TCTTGCCTGACTG‑AACT‑GGC‑GA‑TTAAGTTTCCGCGT‑A‑CCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGAC > NC_000913/4604198‑4604492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |