| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2442529 | 57 (0.720) | 6 (0.080) | 6/280 | 6.5 | 10.7% | coding (766/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | NC_000913 | = 2442614 | 47 (0.630) | coding (851/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2442371‑2442529‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAGCATTTCCCGTTTGCG < NC_000913/2442614‑2442466 CGGGCGGCACGCTGGGGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTC < 1:696662/151‑1CGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTC < 2:997870/151‑1CGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTC < 1:890036/151‑1CGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTC < 1:920553/151‑1CGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTC < 2:1162231/151‑1CGGGAGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTC < 2:1236864/151‑1 GGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:160711/107‑1 GGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 2:160680/1‑107 ACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACCCTCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGCTTGCTGCTcc > 2:324654/1‑148 CGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGGTTGCTGCTGCCCGTTCGGTTAAACCACGGCGCG > 1:643439/1‑151 GCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGG > 1:984555/1‑151 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCG > 1:992605/1‑151 CCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAG > 2:211516/1‑151 GCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAGCATTT > 2:266704/1‑151 cCCGCGCCGTAATAGCCCCGGAGACAACAGCGCGCGGGCAACACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAGCATTTCC < 2:1128650/150‑1 cCCGCGCCGAAATGGCGCCGCAGACCACAGCGCGCTGTGACTACCTCCGCCGATAATCGCCGCTTCCCGTTTGATGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCGCCCCGCAAAGCATTTC < 2:652648/149‑1 ccgacCCGTAAAAGCGCCAGCGAAAACACCCGGCTGCAAGCACAGCCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCAATCACCCCGAAAAGCATTTCCC < 2:665017/146‑1 CGCGCCGAAAGAGCGCCGGCGACAACACCGCGCGGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAGCATTTCCCG < 1:1037318/151‑1 CGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTCCGGTTAAACCACGGCCCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAGCATTTCCCGTT > 1:427182/1‑151 ccaTAAAAGCCCCGGCAACAACACCCCGCGGGAAATCCCCCCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAGCATTTCCCGTTTG < 1:1098416/148‑1 GTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAGCATTTCCCGTTTGCG > 2:484863/1‑151 CGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2442371‑2442529‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGAGCAGGGGAGCGGTAATGTCTGTTCCATCACCCCGCAAAGCATTTCCCGTTTGCG < NC_000913/2442614‑2442466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |