Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,582,206 Δ1,222 bp IS1‑mediated [yhhZ]yrhA [yhhZ], yrhA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3582206 3584118–3583427 1222–1913 79 [1] [28] 29 [yhhZ]–[insB1] [yhhZ], yrhA, insA, [insB1]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 35822051 (0.010)77 (0.970) 43/298 0.5 98.7% coding (343/1179 nt) yhhZ putative Hcp1 family polymorphic toxin protein; putative colicin‑like DNase/tRNase activity
?NC_000913 3583428 = NA (NA)noncoding (1/768 nt) IS1 repeat region

TTAATTGATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCTATTTGGCACTCCCTGAAAATTATAACCGTTTGTTTTTACCAAATTC  >  NC_000913/3582055‑3582350
                                                                                                                                                      |                                                                                                                                                 
ttaattGATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATtc                                                                                                                                                   <  2:907662/151‑1 (MQ=255)
  aaTTGATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCgg                                                                                                                                                 <  2:469264‑M1/151‑3 (MQ=255)
      gATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgat                                                                                                                                             >  1:72826‑M1/1‑145 (MQ=255)
      gATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgat                                                                                                                                             >  2:1145846‑M1/1‑145 (MQ=255)
      gATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgat                                                                                                                                             >  2:769976‑M1/1‑145 (MQ=255)
                cTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaa                                                                                                                                     >  1:236714‑M1/1‑135 (MQ=255)
                  ccATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaactta                                                                                                                                 >  1:1229792‑M1/1‑133 (MQ=255)
                  ccATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaactta                                                                                                                                 >  1:175089‑M1/1‑133 (MQ=255)
                          tattaATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgattta                                                                                                                         >  2:415268‑M1/1‑125 (MQ=255)
                               aTTCCATTAACAATAATGCACAATTTTTTATGGGATTTGACTCCTCTCGCATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggggattgtgccaacttactgatttcgtgta                                                                                                                    >  2:167262‑M1/1‑120 (MQ=255)
                                   cATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgat                                                                                                                <  1:157080‑M1/151‑36 (MQ=255)
                                         cAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                                          >  1:461911‑M1/1‑110 (MQ=255)
                                         cAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                                          >  1:440656‑M1/1‑110 (MQ=255)
                                          aataatGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgttt                                                                                                         <  2:113933‑M1/151‑43 (MQ=255)
                                           ataatGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                        >  2:1153240‑M1/1‑108 (MQ=255)
                                           ataatGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                        >  2:514788‑M1/1‑108 (MQ=255)
                                                gAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                                                                   >  2:498486‑M1/1‑103 (MQ=255)
                                                   cAATTGTTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaactttctgatttagtgtatgatggggtttttgaggtg                                                                                                 >  1:510902‑M1/1‑100 (MQ=255)
                                                   cAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg                                                                                                 >  1:250142‑M1/1‑100 (MQ=255)
                                                   cAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg                                                                                                 >  2:514479‑M1/1‑100 (MQ=255)
                                                     attattTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                               >  1:869984‑M1/1‑98 (MQ=255)
                                                             tGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATACACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                                                                      <  1:365694‑M1/151‑62 (MQ=255)
                                                               ggATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                     >  1:221847‑M1/1‑88 (MQ=255)
                                                               ggATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                     >  2:687630‑M1/1‑88 (MQ=255)
                                                               ggATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                     >  2:1054413‑M1/1‑88 (MQ=255)
                                                                     gACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                                                               >  1:1109516‑M1/1‑82 (MQ=255)
                                                                       cTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttcta                                                                            <  2:443659‑M1/151‑72 (MQ=255)
                                                                       cTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttcta                                                                            <  1:852828‑M1/151‑72 (MQ=255)
                                                                         tCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                          <  2:202042‑M1/151‑74 (MQ=255)
                                                                         tCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                          <  1:1251944‑M1/151‑74 (MQ=255)
                                                                         tCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                          <  2:1153104‑M1/151‑74 (MQ=255)
                                                                            aTCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc                                                                       <  1:1027237‑M1/151‑77 (MQ=255)
                                                                              cGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag                                                                        >  1:108061‑M1/1‑73 (MQ=255)
                                                                                aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag                                                                        >  1:278790‑M1/1‑71 (MQ=255)
                                                                                aataaataGATTTGGAAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag                                                                        >  1:966497‑M1/1‑71 (MQ=255)
                                                                                   aaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc                                                                  >  1:67653‑M1/1‑68 (MQ=255)
                                                                                     ataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                                                              <  1:514677‑M1/151‑86 (MQ=255)
                                                                                        gATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc                                                               >  2:176352‑M1/1‑63 (MQ=255)
                                                                                          tttGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                         <  1:467134‑M1/151‑91 (MQ=255)
                                                                                             ggTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg                                                                                         >  2:575847‑M1/1‑58 (MQ=255)
                                                                                             ggTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg                                                                                         <  1:576086‑M1/116‑59 (MQ=255)
                                                                                              gTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaactttctgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc                                                      <  1:113808‑M1/150‑94 (MQ=255)
                                                                                              gTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag                                                       >  1:567333‑M1/1‑57 (MQ=255)
                                                                                                    tGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgac                                               <  2:117379‑M1/151‑101 (MQ=255)
                                                                                                      gAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCTAt                                              <  1:436029/150‑1 (MQ=255)
                                                                                                           gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgg                                        >  2:467888‑M1/1‑44 (MQ=255)
                                                                                                           gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgg                                        >  2:1069900‑M1/1‑44 (MQ=255)
                                                                                                           gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgg                                        >  1:1184226‑M1/1‑44 (MQ=255)
                                                                                                           gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgg                                        >  1:1117531‑M1/1‑44 (MQ=255)
                                                                                                           gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggggg                                        >  1:189021‑M1/1‑44 (MQ=255)
                                                                                                           gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtga                                                                                                                                              >  2:948352‑M1/1‑44 (MQ=255)
                                                                                                           gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtga                                                                                                                                              <  1:948701‑M1/49‑6 (MQ=255)
                                                                                                            tattattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgg                                        <  2:140940‑M1/150‑108 (MQ=255)
                                                                                                            tattattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgg                                        <  1:498665‑M1/150‑108 (MQ=255)
                                                                                                                attatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgt                                   >  1:525799‑M1/1‑39 (MQ=255)
                                                                                                                attatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgt                                   >  1:98864‑M1/1‑39 (MQ=255)
                                                                                                                attatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgt                                   >  1:762383‑M1/1‑39 (MQ=255)
                                                                                                                attatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                                                              >  2:260317‑M1/1‑39 (MQ=255)
                                                                                                                attatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                                                              <  1:260377‑M1/124‑86 (MQ=255)
                                                                                                                  tatataCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa                                 <  1:754853‑M1/151‑115 (MQ=255)
                                                                                                                   atataCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa                                 >  1:1159471‑M1/1‑36 (MQ=255)
                                                                                                                   atataCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa                                 >  1:288285‑M1/1‑36 (MQ=255)
                                                                                                                   atataCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa                                 >  1:798751‑M1/1‑36 (MQ=255)
                                                                                                                   atataCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa                                 >  1:791948‑M1/1‑36 (MQ=255)
                                                                                                                        cAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaa                           >  2:661306‑M1/1‑31 (MQ=255)
                                                                                                                        cAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggggcgtaacggcaa                           >  1:1045116‑M1/1‑31 (MQ=255)
                                                                                                                          aCTAAGAGGCGCTTTTTTATCGGCTATTCggtgctgctgccaacttactgatttagtgtatgatggtgttttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaca                         >  2:639687‑M1/1‑29 (MQ=255)
                                                                                                                          aCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaa                         >  2:925198‑M1/1‑29 (MQ=255)
                                                                                                                          aCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaa                         >  2:60536‑M1/1‑29 (MQ=255)
                                                                                                                          aCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                                                                      <  1:562574‑M1/90‑62 (MQ=255)
                                                                                                                          aCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                                                                      >  2:562343‑M1/1‑29 (MQ=255)
                                                                                                                            tAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                       <  2:982068‑M1/151‑125 (MQ=255)
                                                                                                                            tAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                       <  2:424349‑M1/151‑125 (MQ=255)
                                                                                                                                     cTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga              >  2:529419‑M1/1‑18 (MQ=255)
                                                                                                                                     cTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga              >  1:837493‑M1/1‑18 (MQ=255)
                                                                                                                                              cGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgc     <  2:869650‑M1/151‑143 (MQ=255)
                                                                                                                                              cGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgc     <  2:288220‑M1/151‑143 (MQ=255)
                                                                                                                                                gCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcaacgcta   >  2:112109‑M1/1‑7 (MQ=255)
                                                                                                                                                   aTTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctat  >  1:694224‑M1/1‑4 (MQ=255)
                                                                                                                                                      |                                                                                                                                                 
TTAATTGATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCTATTTGGCACTCCCTGAAAATTATAACCGTTTGTTTTTACCAAATTC  >  NC_000913/3582055‑3582350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: