Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,665,6980TC46.9% 71.7 / 76.1 97D38G (GAT→GGT) gadXacid resistance regulon transcriptional activator; autoactivator
Reads supporting (aligned to +/- strand):  ref base T (37/14);  new base C (0/45);  total (37/60)
Fisher's exact test for biased strand distribution p-value = 2.58e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTG  >  NC_000913/3665548‑3665842
                                                                                                                                                         |                                                                                                                                                    
ctacAGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCAt                                                                                                                                                      >  1:1052850/1‑151 (MQ=255)
  acAGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATc                                                                                                                                                     >  2:741069/1‑150 (MQ=255)
     gTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCa                                                                                                                                                 >  2:648337/1‑151 (MQ=255)
       gatgaACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCaaa                                                                                                                                               >  1:735160/1‑151 (MQ=255)
          gaACGAGTAATGAATAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACTCACTTATCTACTCGAATTTGGCTTGCATCCGCaaaaa                                                                                                                                             >  2:1048814/1‑150 (MQ=255)
                gTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAACTTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGt                                                                                                                                     >  2:624198/1‑150 (MQ=255)
                           aCTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTaa                                                                                                                       >  1:1229192/1‑151 (MQ=255)
                            cTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTaaa                                                                                                                      >  2:31763/1‑151 (MQ=255)
                            cTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTaaa                                                                                                                      >  2:904098/1‑151 (MQ=255)
                            cTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTaaa                                                                                                                      >  2:584707/1‑151 (MQ=255)
                              tttttATGTGAATGAAGTTTTAATGCCTCCTCCTTGAACACGGGGAAAAAAAATAAAAGCGTGTCCCTTGACACAAATAAAAAATTTTCAACACCCTTATCTCCTCGAATTTGGTTTGCACCCGAAAAAACCAGGTCACCGCCATTAAAAt                                                                                                                    <  1:261233/151‑1 (MQ=255)
                                tttATGTGCATAAAGTTTTAATGCCTCCTCCTTGAGCATGGGAAAAAAAAATGAAAGCGTGTCCCTTGACACAAAAAAAAATTTTTCAACACTTTTATTTCATCAATTTTGGCTTCAACCCGAAAAAACAAGGTCACCGCCATTAAAATAg                                                                                                                  <  2:1162669/151‑1 (MQ=255)
                                ttaaTGTGCTAGAAGATTTAATCCCTCCCCCTTAAGCAGCGGGAAAAAAAATGAAAGCGTGTCCCTTGACACAAATACAAAATTTCCACCCCCCTTATCAACAAGAATTTGGCTTGCACCCGAAAAAACCGGGTCACCGCCATTAAAATAg                                                                                                                  <  2:402790/148‑1 (MQ=255)
                                       gCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATAtt                                                                                                           >  2:710487/1‑151 (MQ=255)
                                          taaaGTTTAAATCCCCCCTCCTTGACAATCGGAAAAAATAATAAAAGCGTGTCCCTTGACCCGAAAACAAAATTTCCACCTCCCTTATCTACCTGATTTTGTCTTCCATCCGAAAAAACCAGTTCACCGCCATTAAAATAGCGATATTCAc                                                                                                        <  2:891422/149‑1 (MQ=255)
                                          tGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCa                                                                                                         >  2:90364/1‑150 (MQ=255)
                                           aaaaaTTTAATGCCCCCCCCTTGAGAATCGGGAAAAAAAATGAAAGCGTGTCCCTTGACACAAATAAAAAATTTTCAACACCCTTATCTACTCAAATTTGGCTTGCACCCGAAAAAACCAGGTCCCCGCCATTAAAATAGCGATATTCAcc                                                                                                       <  1:304610/147‑1 (MQ=255)
                                              gATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGCATACAAAATTTTCAACACACTTATCTACTCGACTTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCAtt                                                                                                    >  2:1023557/1‑151 (MQ=255)
                                               aTTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTa                                                                                                   >  1:462843/1‑151 (MQ=255)
                                               aTTTAATCCCTCCCCCTTGAGCATGGGGAAAAAAAATAAAAGCGTGCCCCTTGACAAGAAAAAAAAATTTTCAACACACTTATCTACTCAAATTGGGCTTGCCCCCGAAAAACCCAGGTCCCCGCCATTAAAATAGCGATATTCACCAt                                                                                                     <  1:36055/149‑1 (MQ=255)
                                                tttAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTaa                                                                                                  >  2:1151091/1‑151 (MQ=255)
                                                tttAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTaa                                                                                                  >  1:481534/1‑151 (MQ=255)
                                                 ttAATGCCTCCTCCTGGAGCATCGGGAAAAATAATGAAAGCGTGTCCTTTGACACGAATAAAAAATTTTCAACACACTTATCTTCAAGAATTGGGCTTGCACCCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAc                                                                                                 <  2:885783/151‑1 (MQ=255)
                                                  tattGCCCCCTCCTTGAGCAGCGGAAAAAATAATGAAGGCGTGTCCGTTAACAAGAATAAAAAATTTTCAACACCCTTATCTCCTCAATTTTGGTTGGCATCCAAAAAACCCGGTGCCCCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  2:170679/148‑1 (MQ=255)
                                                  taagccctccccctTGAGCATCGGGAAAAATAATAAAAGCGTCCCCCTTAACACAAATACAAAATTTTCAACCCATTTATTAACTAAATTTTGCCTTCCACCCGCAAAACCAAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  1:46322/146‑1 (MQ=255)
                                                  tAATGCCTCCTCCGTGAGAATGGGAAAAAAAAAGAAAAGCTTGTCCCTTGAAACGAATAAAAAATTTCCAACACTCTTATATACACGATTTGGGCTTGCACCCAAAAAAACCAGGCCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  2:766753/151‑1 (MQ=255)
                                                  tAATGCCCCCTCCTTGAGCATCGGGAAAAATAATGAAGGCGTGCCCTTGGACAAGAATAAAAAATTTCCAACCCATTTATCTCCTCAATTTGGGCTTGCACCCGAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  2:557069/151‑1 (MQ=255)
                                                  tAATGCCCCCCCCTTGACCATCGGGAAAAATAATGAAAGCGTGTCCCTTAACACAAATAAAAAATTTTCAACACCCTTATCTACTCGATTTTGGCTTGCACCCCAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  1:1257865/151‑1 (MQ=255)
                                                  tAATCCTTCTTCCTTGACCATGGTGAAAAAGAAGGAAGGCTTATCCTTAAACACTAATACAAAATTTTAAACCCACTTATCTATTCGTATTGGGCTTGCCCCCAAAAAACCCTGTCTACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  2:732103/151‑1 (MQ=255)
                                                  tAATCCCTCCTCCTTAACCATCGGAAAAAAAAATGAAGGTTTTTCCCTTACCACAAATAAAAATTTTCCAACACCCTTTTCTACCCAATTTGGGCTTGCACCCAAAAAAACCGGGCCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  2:947743/151‑1 (MQ=255)
                                                  tAATCCCCCCTCTTGGAGCACGGGGAAAAAAAATAAAAGCGTGCCCTTTGACAAAAAAAAAAAATTTCAAACACATTTATCTACTAAATTTTGGCTTCCACCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  1:60255/151‑1 (MQ=255)
                                                  tAATCCCCCCTCCTTGAGCATGGGGAAAAAAAATAAACGCGTCTCCTTTGACACAAAAAAAAAATTTTCAACCCCCTTACCAACTAGAATTGGGTTCCCACCCGAAAAACCCGGTTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  2:589251/151‑1 (MQ=255)
                                                  tAATCCCCCCTCCTGGAGCATGGGGAAAAAAAATAAAAGCGTTCCCCTTGACAAAAATAAAAAATTTTCAACACACTTATCTTCTCGATTTTGGCTTGCACCCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  1:398747/151‑1 (MQ=255)
                                                  tAATCCCCCCCCCTTGAGCATCGGGAAAAATAAAGAAAGCGTGCCCCTTGACAAAAATAAAAAATTTTCAACACATTTATCTCCTCAATTTTGGCTTGCACCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  1:370462/151‑1 (MQ=255)
                                                  aaaTCCCTCCTCTTGGACCATCGGGAAAAAAAATGAAAGCGTTCCCTTTGACACAATTACAAAATTTCCACCCCCCTTATCTTCTCAATTTTGCCTTCCACCCGCAAAACCCAGTTCACCGCCATTAAAATAGCGATATTCACCATTAAcc                                                                                                <  2:96577/150‑1 (MQ=255)
                                                    atccctcctcctTGAGCATGGGGAAAAAAAATGAAGGCGTGCCCCTTGACACAAAAAAAAAATTTTCAACCCACTTATCTACCCAAATTTGGCTTGCATCCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCAt                                                                                              <  1:1070638/148‑1 (MQ=255)
                                                       cctcctcctTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGt                                                                                           >  2:280085/1‑151 (MQ=255)
                                                        cccctcttGGAGCATCGGGAAAAAAAATGAAAGCGTGCCCCTTGACACAAAAAAAAAATTTACAACACTCTTATCTCCGCAAATTTGGCTTGCACCCGAAAAAACCAGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTg                                                                                          <  1:901161/149‑1 (MQ=255)
                                                         tcctcctTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTga                                                                                         >  1:53928/1‑151 (MQ=255)
                                                            tcctTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa                                                                                      >  2:233722/1‑151 (MQ=255)
                                                            tcctTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa                                                                                      >  2:802349/1‑151 (MQ=255)
                                                             cctTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAat                                                                                     >  1:521964/1‑151 (MQ=255)
                                                                  accATGGGGAGAAAAAATAAAGGCGTGCCCCTGGACAAAAATAAAAATTTTTAAACACACTTATCTACTCGATTTTGGTTTGCACCCAAAAAACCAAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                <  2:1013059/149‑1 (MQ=255)
                                                                  accATCGGAAAAAATAAAGAAAGCTTGTCCTTGGCCACAAAAAAAAAATTTAAAACACACTTATCTACGCGAATTTGCTTAGCATCCGAAAAACCCAGGCAACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                <  1:847636/149‑1 (MQ=255)
                                                                   caaaggggAAAAAAAATAAAAGCTTTCCCTTTGACCCAAATACAAAATTTCCACCCCATTTTTCTCCTCAATTTTGGCTTGCACCCAAAAAAACCAGGGCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                <  1:398025/145‑1 (MQ=255)
                                                                   acATCGGAAGAAATAATAAAAGCGTCTCCTTTGACACAAATACAAAATTTACAACACACTTATCTACTAAAATTTGTCTTCCACCCGAAAAAACCAGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                <  2:772007/149‑1 (MQ=255)
                                                                    cctcgagaaaaaagatGAAAGCGTGCCCTTTGACAGAAAAAAAAAATTTACACCCCCCTTATCTACTGGAATTTGTCTTCCACCCAAAAAACCCGGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                <  2:1075075/135‑1 (MQ=255)
                                                                    cATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTa                                                                              >  2:752146/1‑151 (MQ=255)
                                                                    aaTCGGGAAAAATAATGAAAGCGTGCCCTTTGACAAAAAAAAAAATTTTCCACCACCCTTCTCTACTCAATTTTGTTTTGCACCCGAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt                                                                                <  2:1182713/148‑1 (MQ=255)
                                                                    aaTCGGGAAAAATAATAAAAGCGTGTCCTTTGACAAAAATAAAAAATTTACAACACACTTATCTCCTAGATTTTGGTTTGCACCCAAAAAAACCAGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTa                                                                              <  2:948242/150‑1 (MQ=255)
                                                                      tgggaaaaaaTAATAAAAGCTTTCCCTTGAACACAAATACAAAATTTTAACCACACTTTTAACCAGAATTTTTTGTTGCACCAGAAAAAACAAGGTCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATg                                                                            <  2:208921/144‑1 (MQ=255)
                                                                       cGGGAGAAATAATGAAAGCGTGTCCCTTGACACAAATACAAAATTTTCAACACACTTATCTCCTCAATTTTGGTTTGCATCCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                           <  2:31546/151‑1 (MQ=255)
                                                                       cGGAAGAAATAATGAAAGCGTGTCCCTTGACCCAAATACAAAATTTTCAACACACTAATCTACACGAATTTGTTTTGCACCCTAAAAAACCGGAACACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                           <  2:881907/151‑1 (MQ=255)
                                                                        gggAGAAATAATGAAAGCGTGCCCCTTGACAAGAATAAAAAATTTTCAACACCCTTTTCTACCCAATTTTGGTTTGCACCCGAAAAACCCGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                           <  2:539092/150‑1 (MQ=255)
                                                                        ggaaaaaaTAATAAAGGCGTTTCCCTTGACAAAAATAAAAATTTTAAAACACATTTATCTACACAATTTTGTTTTCCACCCAAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                           <  2:757840/145‑1 (MQ=255)
                                                                         ggAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                           >  1:1037809/1‑149 (MQ=255)
                                                                         ggAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTCTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt                                                                           >  1:1019820/1‑149 (MQ=255)
                                                                                taataaAAGCGTGTCCCTTGACACAAATAAAAAATTTCCAACCCCCTTATCTACTCGATTTTGGTTTGCACCCAAAAAAACCAGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATAc                                                                  <  1:323529/151‑1 (MQ=255)
                                                                                taatGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATa                                                                   >  1:232297/1‑150 (MQ=255)
                                                                                  atGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACg                                                                 >  1:438909/1‑150 (MQ=255)
                                                                                  atGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACg                                                                 >  1:793398/1‑150 (MQ=255)
                                                                                  aaaaaaGCGTGTCCCTTGACACAAATAAAAATTTTTCAACACTTTTATCTCCTCGAATTTGGCTTGCACCCGAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGc                                                                <  1:299592/148‑1 (MQ=255)
                                                                                       aGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTa                                                           >  2:445955/1‑151 (MQ=255)
                                                                                       aGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTa                                                           >  2:358548/1‑151 (MQ=255)
                                                                                           tttCCCTGGACACAAAAAAAAAATTTACAACACACTTATCAACACAATTTTGGCTTCCATCCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                        <  2:1114064/148‑1 (MQ=255)
                                                                                           ttccccTTGACACAAATAAAAAATTTTCAACACACTTATCTCCTCGATTTTGGCTTGCACCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                        <  1:90004/147‑1 (MQ=255)
                                                                                           ttccccTTGACACAAATAAAAAATTTCCAACACATTTATCTCCTCGATTTTGGCTTGCACCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                        <  1:935411/147‑1 (MQ=255)
                                                                                           tctCCCTTGACAAGAATAAAAAATTTACAACACTCTTATCTACTCAAATTTGGCTTGAATCCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc                                                        <  2:569717/148‑1 (MQ=255)
                                                                                               ccTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCGATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc                                                   <  2:43779/151‑1 (MQ=255)
                                                                                               ccTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAtt                                                    >  2:1134343/1‑150 (MQ=255)
                                                                                                      cacGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGt                                             >  2:611621/1‑151 (MQ=255)
                                                                                                        caaaTAAAAAATTTTCAACACACTTATCCACTCAATTTTGGCTTGCACCCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAg                                           <  1:976563/149‑1 (MQ=255)
                                                                                                         gaaaaaaaaaTTTTCAAAAAAACTTTTCTTCCCAATTTTGGCTAGCAACCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATg                                              <  1:1230147/142‑1 (MQ=255)
                                                                                                          aaaaaaaaaTTTCCAACCCACTTATCTAATCAATTTGGGCTTGCACCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTg                                         <  2:660524/146‑1 (MQ=255)
                                                                                                           aTACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGa                                        >  2:627323/1‑151 (MQ=255)
                                                                                                             aCAAATTTTTCAACACCCTTATCTACTAAATTTTGGTTTACATCCGAAAAAACAAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGAtt                                      <  1:740331/151‑1 (MQ=255)
                                                                                                                 atttttAAACACTTTTATCTCCTCAAATTTGGCTTCCCCCCAAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCAt                                  <  1:1262325/149‑1 (MQ=255)
                                                                                                                 aatatacAACACTCTTATCTACAAAATTTTGGTTTCCCTCCGCAAAAACCCGGTTACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCAt                                  <  2:165515/145‑1 (MQ=255)
                                                                                                                 aaTTTACAACACCCTTATCTACTCAATTTTGCTTTGCACCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCAt                                  <  2:462694/151‑1 (MQ=255)
                                                                                                                  aTTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATa                                 >  2:378606/1‑151 (MQ=255)
                                                                                                                   tttcCAACACCCTTATCTACTCAATTTTGGCTTGCATCCGAAAAACCAGGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATAGACAATTCCCATGTAGTGATTGCATAGt                               <  1:1137716/151‑1 (MQ=255)
                                                                                                                    tttCAACACCCTAATCTACTCAATTTTGGTTTGCACCCAAAAAAACCGGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt                               <  1:627614/151‑1 (MQ=255)
                                                                                                                    tttCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt                               >  2:757903/1‑151 (MQ=255)
                                                                                                                            ccacTTATCTACTAGAATTTGGCTTGCACCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATGGTTGACTTa                        <  2:580070/150‑1 (MQ=255)
                                                                                                                             cacTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTaa                       >  2:532064/1‑151 (MQ=255)
                                                                                                                             cacTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTaa                       >  1:1030003/1‑151 (MQ=255)
                                                                                                                             cacTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTaa                       >  2:460040/1‑151 (MQ=255)
                                                                                                                                ttttctatccGAATTGGGTTTGAACCCACAAAACCCGGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAatat                    <  2:909675/142‑1 (MQ=255)
                                                                                                                                ttATCTCCTCAAATTTGGCTTGCACCCAAAAAAACCAGCTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAatat                    <  1:90384/151‑1 (MQ=255)
                                                                                                                                   tctcctgaaaTTTGCCTTCCCCCCGAAAAACCCAGTACACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTAc                 <  1:1023929/143‑1 (MQ=255)
                                                                                                                                         nnanTTTGGCTTCCACCCAAAAAACCCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAAc           <  1:512334/149‑1 (MQ=255)
                                                                                                                                          caattttGGTTTCCATCCGAAAAACCCAGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAAc           <  1:92407/147‑1 (MQ=255)
                                                                                                                                           aaTTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACat         >  2:250134/1‑151 (MQ=255)
                                                                                                                                            attttGGCTTGCACCAAAAAAACCCGGGTAACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACat         <  2:481362/149‑1 (MQ=255)
                                                                                                                                                  gtttGCATCCCAAAAACCAGGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTAc    <  1:233771/148‑1 (MQ=255)
                                                                                                                                                  gCTTGAATCCGCAAAACCAAGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTAc    <  1:204938/150‑1 (MQ=255)
                                                                                                                                                  gCTTCCACCCGAAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTAc    <  1:478569/150‑1 (MQ=255)
                                                                                                                                                   cTTACACCCGCAAAAACCTGCTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTg  <  1:625446/151‑1 (MQ=255)
                                                                                                                                                         |                                                                                                                                                    
CTACAGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAACACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTG  >  NC_000913/3665548‑3665842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: