New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39839245 (1.100)4 (0.110) 4/270 3.9 8.7% coding (521/1095 nt) yaiW microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein
?NC_000913 = 398378 43 (1.160)coding (507/1095 nt) yaiW microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

ATCAAATCGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAAT  >  NC_000913/398247‑398528
                                                                                                                                   |                                                                                                                                                      
atcaaatcGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGc                                                                                                                                     <  2:536756/151‑1 (MQ=255)
           aaaCGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTc                                                                                                                          <  2:501051/151‑1 (MQ=255)
              cGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAg                                                                                                                        >  2:489440/1‑150 (MQ=255)
                 cAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCAt                                                                                                                     <  1:265039/150‑1 (MQ=255)
                    aaGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTg                                                                                                                   >  2:303485/1‑149 (MQ=255)
                       ttATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCtt                                                                                                                <  1:361445/149‑1 (MQ=255)
                         ataGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTg                                                                                                             >  1:250415/1‑150 (MQ=255)
                                aCGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAg                                                                                                     <  1:386970/151‑1 (MQ=255)
                                 cGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAg                                                                                                     >  1:248265/1‑150 (MQ=255)
                                  ggTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCa                                                                                                   >  2:35152/1‑151 (MQ=255)
                                     tAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATAc                                                                                                <  1:524182/151‑1 (MQ=255)
                                       gATTAGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGGGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCa                                                                                              >  2:128115/1‑151 (MQ=255)
                                        aTTCGGTGCGTACAGAAAAGCAATTGGGCGCGATTTTGGCGGATCTGATCAACAGGGGGCCAATGGGGCAGACGCTGTTGGGTTCGCTCAATCCGGTGGGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATAcc                                                                                               <  2:166320/149‑1 (MQ=255)
                                        aTTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCaa                                                                                             <  1:305716/151‑1 (MQ=255)
                                             gTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAGCATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAGCAGCATACCAAAggg                                                                                         <  1:454403/150‑1 (MQ=255)
                                                  tACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCg                                                                                   <  1:109514/151‑1 (MQ=255)
                                                      gAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGAGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGa                                                                               >  1:549740/1‑151 (MQ=255)
                                                            cAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAAt                                                                           <  2:438802/149‑1 (MQ=255)
                                                            cAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAAt                                                                           <  1:258101/149‑1 (MQ=255)
                                                                        aTTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGCTGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGGATCCGTGGAAAATGGACGGTACAGTc                                                              >  2:495839/1‑150 (MQ=255)
                                                                        aTTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTcc                                                             <  1:391353/151‑1 (MQ=255)
                                                                        aTTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTc                                                              <  2:379241/150‑1 (MQ=255)
                                                                             tGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAg                                                        <  2:220195/151‑1 (MQ=255)
                                                                               aCGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAgg                                                       <  2:293744/150‑1 (MQ=255)
                                                                                 gATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAg                                                    >  2:353459/1‑151 (MQ=255)
                                                                                    cTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGt                                                   >  2:322933/1‑149 (MQ=255)
                                                                                    cTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCt                                                 <  1:291497/151‑1 (MQ=255)
                                                                                    cTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGATCGCTCAATCCGGTGCGCTCCGGAGGGCCGATGCAGGTCAGTATTGCTTTTGCCGAACAGCATACCCAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGt                                                   >  2:548562/1‑149 (MQ=255)
                                                                                      gctCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCtt                                                >  1:495996/3‑150 (MQ=255)
                                                                                      gATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCtt                                                >  1:402761/1‑150 (MQ=255)
                                                                                      gATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCa                                              >  1:215740/1‑151 (MQ=255)
                                                                                       aTCAACATGGGGCCAATGGGGAAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCGGATGCAGGTCAGCATTGGTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTc                                               <  2:277087/150‑1 (MQ=255)
                                                                                               ggggCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTcgccg                                       >  2:489644/4‑150 (MQ=255)
                                                                                                gTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCcgcg                                     >  1:647501/1‑151 (MQ=255)
                                                                                                          ggCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTtgtg                           >  1:341004/1‑151 (MQ=255)
                                                                                                               aCGCTGTTTGGTTCGCTCAATCCGGTGCGCCCCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGtt                        <  2:379367/149‑1 (MQ=255)
                                                                                                                    gTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTggga                   >  2:472046/1‑147 (MQ=255)
                                                                                                                         gTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTAcc             <  1:128090/150‑1 (MQ=255)
                                                                                                                               tCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACt      <  2:105036/151‑1 (MQ=255)
                                                                                                                                  aTCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGGTGTGGTTTGGGACTTACCATTTACTGaa   >  2:543620/1‑151 (MQ=255)
                                                                                                                                  aTCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGGGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGaa   >  2:237524/1‑151 (MQ=255)
                                                                                                                                   tCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAAt  <  1:81937/151‑1 (MQ=255)
                                                                                                                                   tCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAAt  <  2:647708/151‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                                      
ATCAAATCGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAAT  >  NC_000913/398247‑398528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.