| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,065,598 | 0 | G | A | 48.1% | 49.8 / 46.7 | 81 | L57L (CTG→TTG) | yihO | putative sulphoquinovose importer |
| Reads supporting (aligned to +/- strand): ref base G (24/18); new base A (0/39); total (24/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAG > NC_000913/4065448‑4065748 | cGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAg > 2:1044637/1‑151 (MQ=255) aTAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGaa < 1:1165547/151‑1 (MQ=255) aaaCTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAg > 1:223300/1‑151 (MQ=255) aaCTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑a < 2:110947/151‑1 (MQ=255) aaCTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGGGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑a > 1:1422773/1‑151 (MQ=255) cTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGGCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCCGTAAACG‑CGGAAAAAAA‑CTTCTCCACCAGAAAG‑ATa > 2:262020/1‑151 (MQ=255) cTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATa > 1:60218/1‑151 (MQ=255) tGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATaa < 1:778904/151‑1 (MQ=255) ggAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAAt > 2:1071162/1‑151 (MQ=255) gTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCg > 2:818387/1‑150 (MQ=255) gCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCAt > 2:706364/1‑151 (MQ=255) gCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGGGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCAt > 1:1237035/1‑151 (MQ=255) cccgggAACCGCTAAATATAAAAAAAAGGGAA‑AAATTTGGCTTTTAGCCCC‑AA‑TTTTTTC‑CC‑GCGAGGCGAAAAAAACTCCGGGGAGCATTTCGGTAAACG‑CGAAAAAAAC‑CTCCCCCACAAAAAAA‑ATAATC‑CCGCCATAGTAAGCAGGc < 2:931398/147‑1 (MQ=255) gacccGCTGCATATAAAAAAAAGGAAC‑GAAATTGGCCTTTAGACCA‑AA‑TATTTTT‑CC‑GAGAGTCGAGTAAAAACCCGGTGAGCATATCGGAAAACG‑GGAAAAAAAA‑CTCCGCCCCCAAAAAA‑AAAACC‑CCGCCATAGTAAGCAGGCATcc < 2:1564753/147‑1 (MQ=255) gAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATcc > 2:63448/1‑150 (MQ=255) accctcTGAATAAAAAAAAAAGGAAA‑AAAATTGGCTTTTAGCCCA‑AA‑TTTTTTC‑CC‑GGGAGGCGAAAAAAAACCCGGTGACCATATCGGAAACCG‑CGAAAAAAAC‑CTCCCCCACCAAAAAA‑ATAACC‑CCGCCATAGTAAGCAGGCATccc < 2:92539/145‑1 (MQ=255) gCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAAtt > 1:50376/1‑151 (MQ=255) cttgaataaAAAAAAAAGGGAC‑AAATTTTGCTTTTA‑GCCC‑AA‑TTTTTTTCCC‑GCGAGTCGAGTAAAAACCCGGGGAGCATATGGGTAAACG‑GGGAAAAAAC‑CTCCGCCACAAGAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAAtt < 1:435045/146‑1 (MQ=255) ttGCATAAAAAAAAAAGGGAA‑AAAATTTGCCTTTAGGCCA‑AA‑TATTTTC‑CC‑GCGAGTCGAGAAAAAATCCGGTGAGCATATCGGAAAACG‑CGGCAAAAAC‑CTCCGCCACCAGAAAG‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTc < 2:605177/150‑1 (MQ=255) ctgaaaaaaaaataaaGGGAC‑GAATTTTTCCTTGGGCCCA‑AA‑TTTTTTT‑CC‑GCGAGTCGAGAAAAAATCCGGTGAGCTTTTCGGTAAACG‑CGGAAAAAAA‑CTTCGCCCCCAAAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTc < 1:93564/143‑1 (MQ=255) ctacaaaaaaaataaaGGGAA‑GAAATTTGCTTTTAGGCCA‑AA‑TATTTTC‑CC‑GCGAGTGGAGAAAAAACCCGGGGAGAATATCGGAAAACG‑CGGAAAAAAA‑CTCCGCCACAAAAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTc < 2:76233/143‑1 (MQ=255) cTGAATAAAAAAAAAAGGGAC‑AAATTTTCCTTTTAGGCCA‑AA‑TTTTTTC‑CC‑GGGAGTCGAGAAAAAACCCGGTGAGCATATGGAAAAACG‑CGGAAAAAAA‑CTTCGCCACCAAAAAA‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAAtt < 1:129831/150‑1 (MQ=255) tGCATAAAAAAAAAAGGGAC‑AAATTTTGCCTTTAGGCCA‑AA‑TTTTTTC‑CC‑GCGAGTCGAGAAAAAACCGGGTAAAAATACCGAAAAACG‑CGGAAAAAAC‑CTCCGCCCCAAAAAAG‑AAAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCa < 2:386948/151‑1 (MQ=255) ctaaaaaaaaaaaaaAGGACAGAAATTAGCTTTAAGACCA‑AA‑TATTTTC‑CC‑GCGGATAGAGTAAAAACCCGGGGCGCATTTGAATAACCG‑GGGAAAAAAC‑CTTCACAACAAAAAAA‑AAACTC‑CCGCCATAGTAAGCAGGCATCCCTAATTc < 2:168590/144‑1 (MQ=255) atatAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCg > 2:262882/1‑151 (MQ=255) aataaaGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATaa > 2:871944/1‑151 (MQ=255) aaaGGGCC‑AAATTTGGCCTTTAGCCCC‑AA‑TATTTTT‑CC‑GCGAGTGGAGAAAAAACCCGGTGAGCATATGGGTAAACG‑GGGAAAAAAA‑CTTCGCCCCCAGAAAA‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAAt < 1:555997/151‑1 (MQ=255) aaaGGGAC‑GAAATTTG‑CTTTAGGCCCAAA‑TTTTTTC‑CC‑GGGAGTCGAGAAAAAACCCGGTGACCATATCGGAAACCG‑CGGAAAAAAC‑CTCCCCCACAAAAAAA‑AAAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAAt < 2:1473726/151‑1 (MQ=255) aaaGGGAC‑AAAATTTCCCTTTAGGCCA‑AT‑TTTTTTC‑CC‑GGGAGGCGAGAAAAAATCCGGTGAGCATATGGGTAAACG‑CGGTAAAAAC‑CTTCCCCACAAAAAAA‑ATAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAAt < 1:1212558/151‑1 (MQ=255) gggAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTg > 2:1239053/1‑151 (MQ=255) ggAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTga > 2:106233/1‑151 (MQ=255) tttccttttAGG‑CC‑AA‑TTTTTTT‑CCGGGGTGTGGAAAAAAAACCCGGGGAGAATATGGAAAACCG‑GGAAAAAAAA‑TTTCGCCACAAGAAAG‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATAc < 1:1580694/145‑1 (MQ=255) tttGCTTTTAGGCCA‑AA‑TATTTTT‑CC‑GCGAGTTGATTAAAACTCCGGTGAGCATTTCGATAAACG‑CGGTAAAAAA‑CTTCCCCCCCAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATAc < 1:819293/151‑1 (MQ=255) tGCTTTGAGGCCC‑AT‑TTTTTTC‑GA‑GGGAGGCAAGAAAAAGCCCGGGGAGAATTTCGAAAAACG‑CGGTAAAAAC‑CTCCACCACAAGAAAA‑AAAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACag < 2:212016/151‑1 (MQ=255) tGCGTTTAGGCCA‑AA‑TTTTTTC‑CC‑GCGAGTCGAGTAAAAACCGGGGGAGAATGCCGGAAAACG‑CGGAAAAAAC‑CTCCCCCACCAGAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACag < 2:1486295/151‑1 (MQ=255) tGCCTTTAGGCCA‑AT‑TTTTTTT‑CC‑GCGAGTGGAATAAAAATCGGGTGGGCATACCGGTAAACG‑CGGAAAAAAA‑CTCCGCCCCAAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACag < 2:400412/151‑1 (MQ=255) cttttGGGCCA‑AA‑TTTTTTT‑CC‑GCGAGTCGAGAAAAACCCGGGTGAGAATTTCGGAAAACG‑CGAAAAAAAC‑CTCCCCCCCAAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACagag < 2:171939/149‑1 (MQ=255) cttttAGCCCA‑AT‑TATTTTT‑CC‑GAGAGTCGAGAAAAAACCCGGTGAGATTATCGGAAAACG‑CGGAAAAAAA‑CTCCGCCACAAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACagag < 2:224815/149‑1 (MQ=255) ccttggggcaaaa‑TATTTTG‑CC‑GCGGGTTAAGAAAAAACCGGGGGACAATTTGGCAAAGCG‑GGATAAAAAA‑TTTCGCCACGAAAAAA‑AAAATC‑CCGCCATAGTGAGCAGGCATACCTAATTCATCGGTATAAAATTTGAGGAGATACagag < 1:1250069/140‑1 (MQ=255) cTTTTGGCCCAAA‑TTTTTTC‑CC‑GGGATTCGAGAAAAACCCCGGTGAGCATATCGGAAACCG‑CGGAAAAAAA‑CTCCCCCCCAAAAAAA‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACagag < 1:344447/151‑1 (MQ=255) cTTTAGGCCA‑AA‑TTTTTTT‑CC‑GGGAGGGGAGAAAAAATCGGGGGAGCATATGGGAAACCG‑GGGAAAAAAA‑CTCCCCCCCAAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGt < 1:924456/151‑1 (MQ=255) ttAGGCCA‑AA‑TATTTTT‑CC‑GCGAGTCGAGAAAAAACCCGGGGAGCATTTCGGTAAACG‑CGGTAAAAAA‑CTTCCCCCCCAAAAAG‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTAc < 1:127178/151‑1 (MQ=255) tAGCCCA‑AA‑TATTTTT‑CC‑GCGAGTCAAGAAAAAACCGGGTGAGCATATCGGAAAGCG‑CGAAAAAAAC‑CTCCCCCACCAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTAcc < 2:905326/151‑1 (MQ=255) gCCA‑AA‑TTTTTTC‑CC‑GGGAGGCGAGAAAAAACCGGGTGAGAATTGCGGAAAACG‑GGGAAAAAAA‑CCCCCCCACAAAAAAA‑AAAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGa < 1:262949/150‑1 (MQ=255) gCCA‑AA‑TTTTTTC‑CC‑GGGAGCCGAATAAAAACCCGGTGAGCATATGGGAAAACG‑GGAAAAAAAA‑CTCCCCCCCCAAAAAG‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGa < 1:706735/150‑1 (MQ=255) ccc‑AATTATTTTC‑CC‑GCGAGTAGAGAAAAAACCCGGTGAGCATATCGGTAAACG‑CGAAAAAAAA‑CTCCCCCACCAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGa < 2:76378/150‑1 (MQ=255) ccc‑AA‑TTTTTTC‑CC‑GGGAGTGGAGAAAAAACCCGGTGAGAATATCGGAAACCG‑CGGAAAAAAA‑CTTCGCCCCCAAAAAG‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATg < 1:955718/151‑1 (MQ=255) ccaaa‑TTTTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATACCGGTAAACG‑CGGTAAAAAA‑CTCCGCCACAAGAAAA‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATg < 2:144485/148‑1 (MQ=255) caaa‑TATTTTC‑CC‑GCGAGTCGAGTAAAAAGCCGGTGAGCATATCGGTAAACG‑CGTAAAAAAA‑CTTCGCCACCAAAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGc < 2:892487/149‑1 (MQ=255) c‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCa > 2:1307964/1‑151 (MQ=255) a‑tatTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCaga > 1:131102/1‑151 (MQ=255) a‑tatTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCaga > 2:1622433/1‑151 (MQ=255) tttttc‑CC‑GGGGGTCGAGAAAAAACCCGGTGGACATATCGGAAAACG‑CGGAAAAAAC‑CTCCCCCACAAAAAAG‑AAAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGc < 2:1286100/150‑1 (MQ=255) cgggattcgagaAAAAATCGGGTGATCATATCGGTAAACG‑GGGAAAAAAC‑CTCCGCCACAAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAAt < 2:248825/145‑1 (MQ=255) cgcgatccaagaaaaaaCCCGGTGACCTTATCGTAAACCG‑CGGTAAAAAC‑CTCCCCCCCCAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAAt < 2:282236/139‑1 (MQ=255) cgagaggcggaaaaaaaCCCGGAAAACATATCGGTAAACG‑GGAAAAAAAA‑CTCCGCC‑CCAAAAAGAATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAAt < 1:812168/139‑1 (MQ=255) cacaagtcgagtAAAACACCGGTGAAAATATCGG‑AAACGTCGGTAAAAAC‑CTCCCCCCCCAAAAAT‑A‑AATCTCCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAAt < 1:642668/147‑1 (MQ=255) cgtgtaaagaaaaaaCCCGGGGAGATTCCCGGTAAACG‑TGGAAAAAAA‑CCTCCCCACCAAAAAA‑ATAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAAtt < 1:427091/140‑1 (MQ=255) cgagtcgagaAAAAACCGGGTGAGCATATCGGAAAACG‑CGGAAAAAAC‑CTCCGCCACCAGAAGG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAAtt < 2:187778/150‑1 (MQ=255) gagtAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCg > 1:101627/1‑151 (MQ=255) acccGGTGAGCATATCGGTAAACG‑CGATAAAAAA‑CTCCGCCCCCAAAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGcc < 1:1054775/149‑1 (MQ=255) ccggggnngCANACCNNNNNNNG‑CNAAAANNNN‑NNNCCCCTCAAGAAAA‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGccc < 2:1151088/143‑1 (MQ=255) cccGGTGATCATAGCGTAAAACG‑CGAAAAAAAA‑CTACCCCACAAAAAAA‑AAAACC‑CCGCCATAGTAAGCAGGCATCCCTAATCCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGccc < 2:1552445/150‑1 (MQ=255) tagacATACCGGAAAACG‑GGGTAAAAAA‑CTTCCCCACAAGAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacc < 2:1543798/147‑1 (MQ=255) tGAGCATATCGGTAAACG‑CGGAAAAAAC‑CTTCCCCCCCAAAAAA‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacc < 1:201800/151‑1 (MQ=255) tGAGCATATCGGTAAACG‑CGGAAAAAAA‑CTCCGCCACAAAAAAG‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatac < 2:1127708/150‑1 (MQ=255) tGAGCATATCGGAAAACG‑GGGAAAAAAC‑CTTCGCCACAAAAAAA‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatac < 1:117664/150‑1 (MQ=255) tGAGCATATCGGAAAACG‑GGGAAAAAAC‑CTCCGCCCCAAAAAAG‑ATAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacc < 1:825974/151‑1 (MQ=255) tGAGAATAGCGTAAAACA‑CGAAAAAACA‑CTTGGCCACAAAAAAA‑ATAGTC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatac < 2:687336/150‑1 (MQ=255) gagaATATCGGTAACCG‑CGGAAAAAAA‑CTCCGCCACAAGAAAA‑ATAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacc < 2:1456018/150‑1 (MQ=255) gAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacca > 2:760657/1‑151 (MQ=255) gAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacca > 2:1291900/1‑151 (MQ=255) agaatatCGGAAAACG‑CGGAAAAAAA‑CTCCGCCACAAGAAAG‑ATAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacca < 1:241117/147‑1 (MQ=255) aGCATATCGGAAAACG‑CGATAAAAAC‑CTTCCCCCCAAGAAAA‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacca < 2:223244/150‑1 (MQ=255) gCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccataccata > 1:210029/1‑151 (MQ=255) gCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccataccata > 1:113544/1‑151 (MQ=255) acaatatgggaaaCG‑GGGGAAAAAACCTTCCCCACAAAAAAG‑AAAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCccatacca < 1:1239631/140‑1 (MQ=255) tCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGa > 1:158269/1‑151 (MQ=255) cggggaaaaaac‑CTGCCCCACCAAAAAA‑AAACCC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTcc < 1:1315647/145‑1 (MQ=255) aattttCGCAACAAAAAAG‑ATAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTc < 1:534847/147‑1 (MQ=255) cccaGAAAA‑AAAACC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATg < 2:1172857/150‑1 (MQ=255) catggAAAA‑ATAAAC‑CCGCCATGGTAAGCAGGCATCCCTAATGCATCAGTATAAAATTTGAGGAGATACAGAGTGCCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTGAATg < 2:1073837/147‑1 (MQ=255) ccaGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGt > 2:1026927/1‑151 (MQ=255) gAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAg > 2:1003206/1‑151 (MQ=255) | CGATAAACTGGAGCGTTGCAATTAACGCCGCCGGAACCGCTGCATATAAAATAAAGGGAC‑GAAATTTGCCTTTAGGCCC‑AA‑TATTTTT‑CC‑GCGAGTCGAGTAAAAATCCGGTGAGCATATCGGTAAACG‑CGGTAAAAAA‑CTTCGCCACCAGAAAG‑ATAATC‑CCGCCATAGTAAGCAGGCATCCCTAATTCATCGGTATAAAATTTGAGGAGATACAGAGTACCGATGCAGAGCATTAAATTCGAACCGACGTCGCCCATACCATAGGCGATTTTTTCCCGCAGATTCAGTTTTAATGTCAG > NC_000913/4065448‑4065748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |