BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,604,350	0	C	T	50.0%	65.5 / 73.9	116	S64F (TCT→TTT)	bglJ	bgl operon transcriptional activator
Reads supporting (aligned to +/- strand): ref base C (17/40); new base T (57/0); total (76/40)
Fisher's exact test for biased strand distribution p-value = 2.96e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 122 total aligned reads displayed.

CGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGT  >  NC_000913/4604210‑4604497

cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATgaga                                                                                                                                           <  2:1172389/151‑1 (MQ=255)

 gTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGTCATGAGaa                                                                                                                                          >  2:491131/1‑151 (MQ=255)

  tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAg                                                                                                                                         <  1:1057433/151‑1 (MQ=255)

  tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAg                                                                                                                                         <  1:1220274/151‑1 (MQ=255)

  tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAg                                                                                                                                         <  1:1407240/151‑1 (MQ=255)

    aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTg                                                                                                                                       <  2:591119/151‑1 (MQ=255)

    aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTg                                                                                                                                       <  1:1461358/151‑1 (MQ=255)

      gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGTGAg                                                                                                                                     >  1:801561/1‑151 (MQ=255)

      gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTCTTTTTTTCCATggatagtggg                                                                                                                                     >  2:869950/1‑142 (MQ=255)

        gtagtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAgcg                                                                                                                                   >  2:559971/1‑151 (MQ=255)

           gtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTCTTCCCTGAGAAGGGAgcgccg                                                                                                                                >  1:592464/1‑149 (MQ=255)

           gtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCCGTTTTTTTTTTTTTTTGCATGTGTAGTGGGTGCag                                                                                                                                >  2:1619856/1‑151 (MQ=255)

            taTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCag                                                                                                                                <  2:1488623/150‑1 (MQ=255)

              tCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagaga                                                                                                                             <  2:1059727/151‑1 (MQ=255)

               cGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagagag                                                                                                                            <  2:1422945/151‑1 (MQ=255)

                ggTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTCTTTTTCTGCCTTGAGAAGTGAGCGCAGAGAgg                                                                                                                           >  2:912937/1‑151 (MQ=255)

                 gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCAGAGgggg                                                                                                                          >  1:30005/1‑151 (MQ=255)

                 gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAgggggagccggggggg                                                                                                                          >  1:1089806/1‑136 (MQ=255)

                  tATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAggg                                                                                                                          <  2:824776/150‑1 (MQ=255)

                   aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATGCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGAt                                                                                                                        <  2:1127943/151‑1 (MQ=255)

                   aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGAt                                                                                                                        <  1:1603316/151‑1 (MQ=255)

                   aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGAt                                                                                                                        <  2:20755/151‑1 (MQ=255)

                     tGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTa                                                                                                                      <  1:441046/151‑1 (MQ=255)

                           tttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTg                                                                                                                 <  2:1562150/150‑1 (MQ=255)

                            ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGcc                                                                                                               <  2:1191331/151‑1 (MQ=255)

                              aTTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCCTTTGAAGGGGGCGCCGGGAGGGGttttttttcccg                                                                                                             >  1:575261/1‑141 (MQ=255)

                               ttCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTGCCATGAGAAGTGAGCGCAGGGAGGGGTTATTTTGCctga                                                                                                            >  2:107693/1‑151 (MQ=255)

                                tCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCctgac                                                                                                           <  1:1514572/151‑1 (MQ=255)

                                   gAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTTTCCTGAGAAGTGGGGGCCGAGGGGGGTTTTCTTGCctgactga                                                                                                        >  2:654617/1‑151 (MQ=255)

                                       gTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTGTCTGACTGAACtt                                                                                                    >  2:231551/1‑150 (MQ=255)

                                             gggTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGGGAGGGCAGGGGGGGGTTTTCTTTTCTGGCTTAAATGGCGGtt                                                                                              >  1:295842/1‑151 (MQ=255)

                                                tAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAg                                                                                           <  1:381623/151‑1 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCTTTTTTTCTTTTTTTTCCCTGTGAAGTGAGCGCCGAGAGGGGGTTTCTTTCCTTTCTGAACCGGGGATTAAGttt                                                                                        >  1:40983/1‑151 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTCTTTTTTTGCCATGAGCAGTGAGCGCGGAGAGGGGTTATCTTTCCTGACTGTACTGGCGCGTACGttt                                                                                        >  2:1137071/1‑151 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATCAGAAGGGGGGGCCGGGAGGGGTTTTCTTTCCTTACTTGACCGGGGGTTAAAttt                                                                                        >  1:702594/1‑151 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGTGAGGGCCGGGAGGGGTTTTTTTTCCTGACTGAACTTGCGATTAAGttt                                                                                        >  1:220082/1‑151 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGGGCAGAGAGGGGTTATCTTGCCTTACTGAACTGGCGATTAAGttt                                                                                        >  1:1552868/1‑151 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAAATGGCGATTAAGgtt                                                                                        >  1:1152425/1‑151 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTCCCCTGGGAAGTGAGCGCCGAGAGGGATTATCTTGCCTTGATGAACTGGGGGTTAAGttt                                                                                        >  1:356909/1‑151 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGGGAAGGGGGGGCCGGGAGGGGTTATTTTGCCCGACTGAACCGGGGGTTAAAttt                                                                                        >  1:6020/1‑151 (MQ=255)

                                                   cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTTTTTTTCTGCCCTGAGAAGTGAGCGCCGAGGGGGGTTATTTTGTCTGACTGAACTGGCGGTTAAGttt                                                                                        >  2:657293/1‑151 (MQ=255)

                                                     cTTATAAGCTTCATACCTATACTAGCCAGGAGTCATTTCAGGCTGCCATGTCGCGGGTCTCGTTTGCGGCGGTCATTTTTTCTTTTTTTCCCCTGGGAAACGAAGCCAGAGCGGGGTTTTCTCGCCTGACCGAACCGGCGGCTCAGTTTc                                                                                       >  2:488691/1‑150 (MQ=255)

                                                     cTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTCTGCCATGAGAAGTGAGCCGAGAGAGGGATTATTTTTTCCTACTTAAATGGGGATTTAGtttt                                                                                       >  1:921811/1‑149 (MQ=255)

                                                     cTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCGGTTAAGtttt                                                                                       >  2:74556/1‑149 (MQ=255)

                                                     cTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGGGCGCCGAGAGGGGTTATCTTTCCTTGCTTCACTTGGGATTAAGGTTc                                                                                       >  1:750019/1‑150 (MQ=255)

                                                            gCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAGGGCAGAGAGGGGTTATTTTGCCTGACTGAACCGGCGGTTTAGTTTCCGCGTAc                                                                                >  1:1229907/1‑150 (MQ=255)

                                                            gCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTTTCTGACTGAACTGGCGATTTAGTTTTCGCGTAc                                                                                >  2:1447393/1‑150 (MQ=255)

                                                             cTCCATACCTATACCAGTCAGGAGTCATTTCAGGGTGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCATTAGAAGTGCGCGCAGAGGGGGGTTTTCTTGCCTGACTGAACTGGCGGTTTAGGTTCCGCGtgac                                                                               >  2:1440289/1‑147 (MQ=255)

                                                             cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTCTTCCATGAGAAGAGAGGGCGGAGAGGGATTTTCTTTCCTGGCTTTACTTGTGATTAAGATTTCCCGGAcc                                                                               >  2:1169416/1‑150 (MQ=255)

                                                             cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGAGAAGTGAGGGCAGAGAGGGGTTATTTTTCCTTACTGAACTTGCGATTAAGTTTCcgcggtcc                                                                               >  2:711436/1‑146 (MQ=255)

                                                             cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGAt                                                                                                                        <  2:794579/109‑1 (MQ=255)

                                                             cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCCTTTTTTTTTTTTTTGCCCTGAGAAGGGGGGGCAGAGGGGGGTTATCTTGCCTGACTGAAATGGCGAATTAGTTTTCCCGTAcc                                                                               >  1:1066328/1‑150 (MQ=255)

                                                                 aTACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGGAGGGAGCGCAGAGAGGGGTTATTTTTGCCGGCTGTAACGGCGATTAAGTTTTCGCGGACCCGGCg                                                                          >  2:1278121/1‑151 (MQ=255)

                                                                 aTACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCg                                                                          <  1:925974/151‑1 (MQ=255)

                                                                  tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGTTCTGTTTTTTATTTTATCCCATTAGAAGGGAGCGCAGAGAGGGATTATTTTTTCTTACTGTAATGGGCGTTAAATTTTCGCCGACCCCGCGt                                                                         >  1:257452/1‑151 (MQ=255)

                                                                  tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTCTTCCCTGAGAAATGAGCGCAGAGAGGGGTTATTTTGTCCGACTGAACTGGCGGCTAAGGTTTCGCGTACCCGGCGt                                                                         >  2:1158345/1‑151 (MQ=255)

                                                                  tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGGGCCGAGAGGGGTTATTTTGCCTGACTGAACTGGCGATTTAGTTTCCGCGGACCCGGCGt                                                                         >  2:430134/1‑151 (MQ=255)

                                                                   aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTTCCTTAGAAGTGAGCGCCGCGAGGGGGTTTCTTGGCTTACTTAACTAGCGATTAAATTTTCGCGGACACGGCggt                                                                        >  2:1085894/1‑149 (MQ=255)

                                                                   aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGGGAAGGGAGCGCCGAGAGGGGTTTTCTTGCCTGACTTAAATGGCGATTAAGTTTTCCCGGACCCCGCGtt                                                                        >  1:661086/1‑151 (MQ=255)

                                                                   aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCCTGAGAAGGGAGCGCAGGGAGGGGTTATCTTTCCTGACTGAACTGGCGGATAAGGTTTCGCGGAACCGGCGtt                                                                        >  2:1186066/1‑151 (MQ=255)

                                                                   aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTTCCATGGGAAGGGAGCGCCGGGAGGGGGTTTCTTTCCTGACTGAACTGGCGGTTAAGTTTCCGCGGACCCGGCggt                                                                        >  1:308687/1‑149 (MQ=255)

                                                                   aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGGGCAGAGAGGGAGTATCTTGCCTGACTGAACTGGCGATTTAGGTTTCGCGGAACCGGCGtt                                                                        >  2:1127551/1‑151 (MQ=255)

                                                                   aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGTTTTTTTTTTTTTTTTTCCATGAGAAGAGAGGGCAGTGAGGGATTTTTTTGCCTGATTGAATATGCGATTAAGTTTTcgcggcgcccgcggt                                                                        >  2:542560/1‑140 (MQ=255)

                                                                   aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTTTTTTTTTTCCCTGAGAAGGGAGGGCAGGGGGGGGTTATCTTTCCTGTCTGAACTGGCGGTTAAGTTTTCGCGGGCCCGGCggt                                                                        >  2:1143640/1‑149 (MQ=255)

                                                                   aCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTCTGCGGCGGCCCCTTTTTCTTTTTCTTCCACGAGGAAGGAGCGCCGGGAGGGGTTATCTTGCCTCACTGAAATGGCGACTAAGTTTCCCCGTACCCCGNGnt                                                                        >  1:333180/1‑151 (MQ=255)

                                                                    ccTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTTGACTGGCGATTAAGTTTTCGCGTACCCGGCGgtt                                                                       >  2:1056105/1‑151 (MQ=255)

                                                                     cTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAATGAGCGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCGATTAAGTTTTCGCGTACCCGGCGgttt                                                                      >  2:157131/1‑150 (MQ=255)

                                                                     cTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTAATTTTTTTTTTTTTTTCCATGAGAAGAGGGCGCGGAGGGGGATTATTTTGCCCGACTGAACTGGGGACTAAGTTTTCCCGCACCCgggggttg                                                                      >  1:546622/1‑145 (MQ=255)

                                                                       ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCTTTTTTTTTTTTTTTTCCATGAGAAGGGAGGGCAGAGAGGGGTTTTCTTTTCCGTCCGTACTGGCGATTAAGTTTCcgcgccccccccgctttgt                                                                    >  1:1318844/1‑136 (MQ=255)

                                                                       ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCATTTTTTTTTTTTCTGCCCTGAGAAGTGAGCGCCGAGGGGGGTTATCTTGCCTGACTGAACTGGCGATTAAGGTTCCGCGTACCCCGCGGTTTGt                                                                    >  2:890065/1‑151 (MQ=255)

                                                                        taCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGtt                                                                   <  1:658063/151‑1 (MQ=255)

                                                                            aGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGGGCCGAGAGGGGTTTTCTTGCCTGACTGAACTGGCGATTAAGTTTTCGCGTACCCGGCGCTTTGTttttt                                                               >  2:553541/1‑150 (MQ=255)

                                                                            aGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGGGAGGGGTTTTCTTGCCTGACTGGACTGGCGATTAAGTTTTCGCGGACCCGGCGGTTAGTTATTg                                                               >  2:586133/1‑151 (MQ=255)

                                                                              tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTg                                                               <  1:174610/149‑1 (MQ=255)

                                                                                   aGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTTCCCTGAGAAGTGAGGGCAGAGGGGGGTTTTTTTTCCTGACTGAAATGGCGGTTTAATTTTCCCGTACCCCGCGGTTTGTTTTTTCGggtgg                                                        >  1:1375183/1‑150 (MQ=255)

                                                                                      cATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTGCCATGAGAAGGGAGGGCCGAGGGGGGTTTTCTTTCCTGACTGAACTGGGGATTAAGTTTTCGCGGACCCGGCGGTTTGTTTTTGCggggggtga                                                     >  1:1284911/1‑144 (MQ=255)

                                                                                      cATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCCGAGAGGGGTTTTCTTTCCTGACTGAACTGGGGATTAAGTTTTCCCGGAACCGGCGGTTTGTTATTTGGgatggtgg                                                     >  2:1389689/1‑150 (MQ=255)

                                                                                      cATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgatga                                                     <  2:389582/151‑1 (MQ=255)

                                                                                       aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgatgat                                                    <  2:1052434/151‑1 (MQ=255)

                                                                                        tttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTCTTCCCTGAGAAGGGGGCGCAGGGGGGGGTTTTCTTTCCTGACTTAACTGGCGGTTAAGTTTTCCCGTACCCCGCGTTTTTTTTTTTCGGGTGATGata                                                   >  1:128630/1‑151 (MQ=255)

                                                                                        tttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGAGGGATTATTTTTCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCCGCGTTTAGTTATTGCGGATGATGata                                                   >  2:228208/1‑151 (MQ=255)

                                                                                          tCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGTCCTGAGAAGTGAGGGCAGGGAGGGATTTTCTTGCCTGACTGTACTGGCGGTTTAGTTTTCGCCTACCCCGCGCTTCGTTATTTCGGGTGGTGGTAtt                                                 >  2:1581498/1‑151 (MQ=255)

                                                                                             ggATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTTTTTTTTTGGCCCGAGAAGTGAGCGCAGGGAGGGGTTATCTTTCCTGACTGGACTGGCGGTTAAGTTTTCGCGGACGCGGCGTTTTGGTATTGCGGATTATGGTAATGaa                                              >  2:355093/1‑151 (MQ=255)

                                                                                               aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTGCCCGGCGTTTAGTTATTGCGGATGATGATATTGAAg                                             <  1:1137600/150‑1 (MQ=255)

                                                                                               aTGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGc                                            <  2:546717/151‑1 (MQ=255)

                                                                                                    aTGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGc                                       <  1:890539/151‑1 (MQ=255)

                                                                                                      gTCGCGGATCTCGTTTGCGGCGGTCCTTTTTTTTTTTTTTGCCCTGGGAAGGGGGCGCAGAGAGGGGGTATCTTGCCTGACTAAACTGGCGGTTAAGGTTTCGCGTACCCCGCGTTTAGTTATTGCGGTGGTTGTTATTGTAGCTCgg                                        >  2:1333378/1‑148 (MQ=255)

                                                                                                          cgGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTg                                 <  1:528826/151‑1 (MQ=255)

                                                                                                            gATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTgg                                <  2:271878/150‑1 (MQ=255)

                                                                                                              tctcGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTc                             <  2:372934/151‑1 (MQ=255)

                                                                                                                   tttGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTg                         <  1:1241563/150‑1 (MQ=255)

                                                                                                                   tttGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGt                        <  1:43006/151‑1 (MQ=255)

                                                                                                                               aTTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGc            <  1:114190/151‑1 (MQ=255)

                                                                                                                               aTTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGc            <  1:660588/151‑1 (MQ=255)

                                                                                                                                    ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTTGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGAc       <  2:89049/151‑1 (MQ=255)

                                                                                                                                    ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGAc       <  1:842416/151‑1 (MQ=255)

                                                                                                                                    ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGAGGATATTGAAGCTCGGGTGATTGGTTCATTGTCGCCATCACCGCTGGAc       <  2:1584868/151‑1 (MQ=255)

                                                                                                                                       tttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGgt    >  2:226493/1‑151 (MQ=255)

                                                                                                                                         tttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGgtgt  >  1:1230446/1‑151 (MQ=255)

                                                                                                                                         tttctGCCATGAGAAGCGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGgtgt  >  1:1592213/1‑151 (MQ=255)

CGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGT  >  NC_000913/4604210‑4604497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`