| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,640,981 | 0 | C | T | 52.9% | 14.3 / 102.0 | 85 | F40F (TTC→TTT) | dtpB | dipeptide and tripeptide permease B |
| Reads supporting (aligned to +/- strand): ref base C (4/36); new base T (45/0); total (49/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.34e-20 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.85e-06 | |||||||||||
GGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTG > NC_000913/3640841‑3641131 | ggTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTTGTTtaaa > 1:1204990/1‑150 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGGTTTTTTTGGTTaaca > 2:1307563/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTTTTTAACa > 1:582995/1‑151 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTtaaaa > 2:1126606/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTtaaaa > 1:1405197/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTTAACa > 2:708896/1‑151 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAAc < 1:323419/150‑1 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGttttttttttttaaa > 2:343093/1‑142 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTttcttttcttgaca > 2:832906/1‑142 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTTGTTtaaaa > 1:485497/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTTGTTtaaaa > 1:1442412/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTTGGTaaaaa > 1:1479498/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTCTTTGTTtaaaa > 2:1616074/1‑149 (MQ=255) aTTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGGTTTTTTTTTTTAAACa > 2:179721/1‑150 (MQ=255) aaGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGa < 2:841512/151‑1 (MQ=255) gTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGGTTTTTTTTTTTAAAAACCTTGGttt > 1:1236205/1‑151 (MQ=255) gTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTTAAAAGCTTGGGttt > 1:278190/1‑150 (MQ=255) gTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCTTTtaaaacccttggttt > 1:675858/1‑139 (MQ=255) gTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTtaaaacactgggttt > 1:1397689/1‑139 (MQ=255) gTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTTAACAACTTGGCttt > 2:486691/1‑150 (MQ=255) gTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTTAACAGATTgggatt > 2:855136/1‑147 (MQ=255) aataaataTGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTTGTTTAAAAACtttggttttc > 1:1538244/1‑142 (MQ=255) aataTGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAag < 1:1258594/151‑1 (MQ=255) tatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTTTTTAACAGCTTGGGTTTTCGCCagag > 1:1521349/1‑151 (MQ=255) tatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTTAACAGCTTTGGTTTTCGCAagag > 2:791391/1‑151 (MQ=255) atGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGc < 2:1306058/151‑1 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGGTTTTTTTGTTTAAAACACTTGG‑TTTTCGCCAGAGCAg > 2:614664/1‑151 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGGTTAAAAACTTGGGTTTTCGccaaaggag > 1:1395364/1‑143 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCTTTTAACAACTTGGGTTTTCCCCAAAGCAg > 1:839430/1‑151 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTTAACAACCTGGATTTTCGCCagagacg > 2:1499907/1‑148 (MQ=255) tACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCt < 1:99498/151‑1 (MQ=255) tACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCt < 1:315529/151‑1 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTTAACAGCCTTGGTTTTCGccaaaggcgggttt > 2:669481/1‑138 (MQ=255) acaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTg < 1:1180911/151‑1 (MQ=255) acaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGCTTTTTTTGTTTAACAGCTTGGGTTCTCGCCAGAGCAGGCgtttt > 2:921621/1‑150 (MQ=255) aacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTc < 2:1131153/151‑1 (MQ=255) aacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTc < 2:111230/151‑1 (MQ=255) cacCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTTTTTAACAGCTTTGGTTCTTGCCAGAGGAGGGtttttttc > 1:958908/1‑146 (MQ=255) cacCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTTAAAAACCTGGGTTTTCGCAAAAGCAGGGTTTTTTcc > 1:1192356/1‑149 (MQ=255) cacCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTTGTTAAACAGCTTGGGTTTTCTCCCAAGCAGGGTTTTTTcc > 2:28096/1‑149 (MQ=255) acCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTTGTTTAAAAACTTGGGTTTTCGCCAAAGCAGGCCTTTTTct > 1:1421603/1‑148 (MQ=255) cccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTCCTGGC‑GGGTTTTTTGGTTATAAATCTTTGGTTCTCGCCAAAGCCGGCCTTTTTCGCtt > 2:530896/1‑151 (MQ=255) cccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTTAACAACTTGGGTTTTCGCCAAAGCAGGGTTTTTTCACtt > 1:145409/1‑151 (MQ=255) cccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTTAAAAGCTTTGGTTTTCGCAAAAGGCGGGtttttttcctt > 1:953889/1‑144 (MQ=255) cccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTCTTAAAAAGCTTGGATTCTCGCAAAAGCAGGGTTTTTTCACtt > 1:704062/1‑151 (MQ=255) tGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTTGTTTAACAGCTTGGGTTCTCGCCAGAGCAGGCTTTTTTTACcttttg > 2:1457987/1‑149 (MQ=255) gggATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTAAAAAGATTGGGTTTTTGCAAAAGGAGGGTTTTTTTACtttttggg > 1:736257/1‑147 (MQ=255) tgctgcAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTAAAAAACTTGGGTTTTCGCAAAAGGAGGGGTTTTTCCCTTTTTGTGGttt > 1:664380/1‑151 (MQ=255) tgcAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTtgc < 1:119914/151‑1 (MQ=255) gcagcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTTAACAGCTTGGGTTTTCGCAAAAAGAGGCCTTTTTCACTTTTTGTGCttttt > 1:245374/1‑148 (MQ=255) cagcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTTAAAAACTTGGGTTTTCGCCAGAGGAGGGTTTTTTCTCCTTTTGGGCttttt > 1:1203418/1‑147 (MQ=255) aaCCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTTAAAAACTTGGGTTTTCGCCAGAGGAGGCTTTTTTTCCTTTTTGGGCgtttttttcg > 2:1454828/1‑143 (MQ=255) ccTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTCTTTTAACAGCCTTGGTTCTCGCCAGAGCCGGGTTTTTTTTCTTTTTTTGCTTTTGCTGCGCTgg > 2:268227/1‑151 (MQ=255) tCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTc < 2:1529109/151‑1 (MQ=255) tCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTc < 1:476793/151‑1 (MQ=255) tCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTc < 1:298963/151‑1 (MQ=255) tCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTc < 1:827695/151‑1 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATgg < 1:570102/151‑1 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATgg < 1:1518357/151‑1 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATgg < 2:842081/151‑1 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATgg < 1:1103062/151‑1 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATgg < 1:866064/151‑1 (MQ=255) atgtttCATGATGTCTGTTGTCCAGTAAGGGGAGCGATTCGGCTACTACGTCGTGCAGGGCGGACAGGC‑GGTTTTCTTCGTAAAACAGCTTGGATTCTCGCAAGGGCAGGCTTTTGTCCCTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑c < 2:833263/148‑1 (MQ=255) aTTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑c < 1:1392364/151‑1 (MQ=255) tttttCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCCCTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑cc < 1:1212519/151‑1 (MQ=255) aTGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CAttt < 1:448891/151‑1 (MQ=255) aTGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CAttt < 1:374722/151‑1 (MQ=255) tCTTTTTTGTCGAGTTATGGGTGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCCCTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCAt < 2:880957/151‑1 (MQ=255) tCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGGTTAACAACTTGGATTCTCTCCAGAGCCGGGCTTTTTCCCTTTTTGTGCTTTTTCCTCGCCGGTCTATTG‑CCT‑CAttttctt > 2:1383804/1‑147 (MQ=255) gAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTCGTTTAAAAGCTTGGATTTTCGCCAAAGCAGGCTTTTTTTACTTTTTGTGCTTTTTTTTCGCTGGGCTATGG‑CCTCCTTTTCCTTTGGGGGCttt > 1:82242/1‑149 (MQ=255) aGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTTAACAGCTTGGATTTTCGCAAGAGCAGGGTTTTTTCACTTTTTGTGGTTTTTCTGCGCTGGGCTATGGCCCC‑CTTTTCCTTTgggggcattt > 1:88361/1‑147 (MQ=255) aGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTTGTTTAAAAGCTTGGGTTTTCGCAAGAACAGGGTTTTTTTCCTTTTTGTGCTTTTTCTTCGCTGGGCTTTGG‑CCT‑CCTTTTCATTGGGGGGTATGt > 2:872271/1‑151 (MQ=255) gAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTTAAAAGCCTGGGTTTTCGCCAAAGAAGGCTTTTTTCACTTTTTGTGGTTTTTCTGCGCTGGGCTATGG‑GCC‑CCTTTCCCTTtgcggccctttttgcggc > 1:1063052/1‑138 (MQ=255) gAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGac < 2:740018/150‑1 (MQ=255) cGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGgccac < 2:170000/150‑1 (MQ=255) ttCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACctgc < 2:333017/151‑1 (MQ=255) cGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACctgc‑tg < 1:1095356/151‑1 (MQ=255) actacGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGAc < 2:1488927/151‑1 (MQ=255) gTGCAGGGCGTACTGGC‑GGTTTTTTTTGTTTAACAGCTTGGGTTTCCGCAAGAGCAGGGTTTTTTTACTTTTTGTGCTTTTTCTGCGCTGGGCTATGG‑CCT‑CATTTTCATTTGCGGGTCTTTTGGCGCCCCCCCCCTTGGGGCCCAAAcc > 1:1283524/1‑149 (MQ=255) gTGCAGGGCGTACTGGC‑GGTTTTTTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTTTTACTTTTTGTGGTTTTGCTGTGCTGGGCTTTTG‑CCT‑CCTTTTCATTTGCGGCTTTTTCTGCGGCCCCCCGCTTGGGGGCCaaccc > 2:550593/1‑147 (MQ=255) tGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCAc < 1:1418720/151‑1 (MQ=255) tACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTc < 2:958425/150‑1 (MQ=255) tACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTc < 2:308558/150‑1 (MQ=255) c‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTCTTGGAg < 1:57357/150‑1 (MQ=255) c‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTCTTGGAg < 2:664063/150‑1 (MQ=255) ggTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTCTTGGAGCa > 1:880472/1‑151 (MQ=255) gTTTTCTTCGTTAACCAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTCTTGGAGCa < 1:359941/150‑1 (MQ=255) ttcttcGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTCTTGGAGCACTtg < 2:1495555/151‑1 (MQ=255) cttcGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTCTTGGAGCACTtgtg < 1:207540/151‑1 (MQ=255) | GGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGG‑CCT‑CATTTCCATTGGCGGCTATGTCGGCGACCACCTGC‑TGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTG > NC_000913/3640841‑3641131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |