| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,332,823 | 0 | A | G | 56.7% | 54.3 / 107.6 | 93 | pseudogene (1580/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (12/27); new base G (51/0); total (66/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.68e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.27e-10 | |||||||||||
CTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCATTTTTTACC > NC_000913/2332676‑2332969 | cTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGAt > 2:1763116/1‑151 (MQ=255) aTTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGttt > 1:584296/1‑151 (MQ=255) aTTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATTGGCGGG‑GGGGGGGttt > 1:428001/1‑151 (MQ=255) ttACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCTGCGGC‑GGGGCGAtttt > 1:1039601/1‑150 (MQ=255) ttACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGtttt > 2:1516695/1‑150 (MQ=255) ttACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGtttt > 1:1558325/1‑150 (MQ=255) ttACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTa > 2:1340567/1‑151 (MQ=255) ttACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTa > 1:868766/1‑151 (MQ=255) ttACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGGGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGC‑GGGGGGAGTTa > 2:1451057/1‑151 (MQ=255) aCTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGC‑GGGGGGAtttta > 2:887130/1‑148 (MQ=255) gTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGttttaagc > 1:331578/1‑145 (MQ=255) gTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGGTTTAACGc > 2:1250206/1‑150 (MQ=255) gTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGc < 2:331686/150‑1 (MQ=255) tATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGcc < 1:1112637/150‑1 (MQ=255) aTTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGCGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTTAAGCca > 1:882521/1‑150 (MQ=255) aTTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGAGTTTAAGCca > 1:1062006/1‑150 (MQ=255) gtgCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTTAAGCCACAtt > 1:1306779/1‑150 (MQ=255) gtgCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGC‑GGGGGGGTTTTACGCcacaag > 1:1298904/1‑149 (MQ=255) tgCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATg < 2:197657/150‑1 (MQ=255) cGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGAc < 2:491334/150‑1 (MQ=255) cGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGAc < 2:1559425/150‑1 (MQ=255) gCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTNNNNNNGGCGGGGGNNATTTACCGCCCNAtacct > 1:594743/1‑146 (MQ=255) gCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACAAGAccc > 2:160962/1‑149 (MQ=255) gTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTTACGCCACATGACCCCTgg > 2:885530/1‑151 (MQ=255) tACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCCCCTGaaccccgg > 2:273283/1‑143 (MQ=255) aCTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTTTCGGCGGC‑GGGGGGATTTAACGCCACATGACCGCTgggg > 2:592729/1‑149 (MQ=255) ttAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTAAAGCCACATGACCGCTggggg > 2:1372256/1‑147 (MQ=255) gAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCCCATGACCCCTGGCGTCGGgca > 2:945136/1‑151 (MQ=255) gTAATGCGCCAGCCCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTGTATCGCCACCAGAACGCTGGCGGCGGgcac > 1:1611480/1‑150 (MQ=255) gTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACATGACCCCTGGCGGCGGacac > 2:1632823/1‑150 (MQ=255) gTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATAACCGCTGGCGCCGGgcaa > 2:1117586/1‑149 (MQ=255) gTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGC‑GGGGGGATTTAACGCCACATGACCCCTGGcggcgggaac > 2:653093/1‑146 (MQ=255) tAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTTACACCACATGACCGCCTGCGTCGGGCACCg > 1:36928/1‑151 (MQ=255) tAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGacac < 1:1294602/149‑1 (MQ=255) aTGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGC‑GGGGGGGTTTTAAGCCACAAGACCGCCGGGGTCGGGCAccc > 1:961306/1‑148 (MQ=255) gcgcCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTAAAGCCAAAAGACCGCTTGGGGCGGGCACCCtttt > 2:584371/1‑150 (MQ=255) gcgcCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGGTTAACGCCCCATGACCGCTGGCGGCGGGCACCCtttt > 2:382964/1‑150 (MQ=255) gcgcCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACATGACCCCCGGGGGCGGGCAcccgtt > 2:736908/1‑146 (MQ=255) gcgcCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAAAGCCACATGACCGCCGGCGTCGGACAcccgttt > 2:918600/1‑146 (MQ=255) cgcCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTTACGCCACCTGACCGCTGGGGTCGGGCAcccgttc > 1:812992/1‑145 (MQ=255) gcgTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTTACGCCACAATACCGCCGGCGGCGGGCAACGGTTTGCTGccctt > 1:1034570/1‑147 (MQ=255) cggtCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTcc < 1:664636/147‑1 (MQ=255) cgTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACATGACCGCCGGCGTCGGGCACCGTTTCGCTTCCtttc > 1:1175795/1‑148 (MQ=255) cgTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTcc < 2:1693207/150‑1 (MQ=255) cgTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTcc < 1:243436/150‑1 (MQ=255) tGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGacac < 1:886643/151‑1 (MQ=255) tGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGacac < 1:1597847/151‑1 (MQ=255) gAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGGGGC‑GGGGGGGTTTTAGGCCACATGACCCCTGGCGGCGGGCACCGCTTCGCTGCCCTCCCACGACACg > 1:20420/1‑151 (MQ=255) gAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGC‑GGGGGGGTTTTACGCCCCATGACCGCTTGCGTCGGGCCACCTTTCGCCTCCCTCCAGCggaacg > 2:1382936/1‑146 (MQ=255) ggATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTTACGCCACATGACCGCCGGCGGCGGGCACCCTTTCGCTGCCTTCCCGCGACACggg > 2:790873/1‑151 (MQ=255) tctcTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTTACGCCCCAAGACCCCCGGCGGCGGGCACCCTTTTGCTGCCCTCCCGCGACACggggga > 2:842580/1‑149 (MQ=255) ctctTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTTAAGCCACATGACCCCCGGGGTCGGGAACCCTTTCGCTGCCTTCCAGCGACACGGGGgaa > 2:431167/1‑151 (MQ=255) ctTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGTTTTACGCCACATGACCCCTGGCGTCGGGCACCCGTTTGCTGCCTTCCCGCGAACCGGGGGAACg > 2:574561/1‑151 (MQ=255) ctTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTTACGCCCCAAGACCGCCGGCGTCGGGCACCCTTTTGCCGCCCTCCCGCGACACGGGGgaaag > 2:1441194/1‑149 (MQ=255) ctTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACATTAACCCCGGCGGCGGGAACCCGTTCGCTGCCTTCCCGCGACACGGGGgaaag > 2:873167/1‑149 (MQ=255) ctTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACAAGACCGCTGGCGGCGGACACCCGTTCGCCGCCTTCCAGCGACACGGGGgaaag > 2:1550884/1‑149 (MQ=255) ctTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGC‑GGGGAGATTTAAAGCCACATGACCGCTGGCGTCGGACACCGGTTCGCTGCCTTCCAGCGACACGGGGgaaag > 2:824817/1‑149 (MQ=255) ctTTGGGGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCCGCCGC‑GGGGGGATTTTAGCCCACGTAATCCCCGGCGTTTGTGACCGTTTGGCTTGCTTTCCGCCGCACGGGGGAAca > 2:801983/1‑150 (MQ=255) ttGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGATCGGTTTATCGGCGGC‑GGGGGGATTTTACGCCCCATGACCGCCGGGCTCGGGCACCCTTTTGCTGCCTTCCCGCGAACCGGGGGAACGt > 2:1339285/1‑150 (MQ=255) tggtggtggTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTcc < 2:821642/151‑1 (MQ=255) gtggtgACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGGGTTAACGCCACATGACCGCTGGCGTCGGGCACCGGTTCGCTGCCTTTCAGCGACACCGGGGAACGGCCGGCaa > 1:66987/1‑150 (MQ=255) aCGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACATGACCGCTGGGGTCGGGCACCGTTTTGCTGCCTTCCCGCGACACGGGGGAACGGCCGGCCTAACCCa > 2:982354/1‑151 (MQ=255) aCGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGc < 2:1391430/150‑1 (MQ=255) aCGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGc < 1:104063/150‑1 (MQ=255) aTACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTTACGCCCCATGACCGCTGGGGTCGGGCACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGGCCGGCATAAccccaaacg > 2:226168/1‑143 (MQ=255) ccgcgccgTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTAc < 1:157552/150‑1 (MQ=255) ccgcgccgTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTAc < 1:1643656/150‑1 (MQ=255) cgcgccgTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCg < 1:1737063/151‑1 (MQ=255) cgccgTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGAc < 1:247921/151‑1 (MQ=255) aCTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGAt < 2:945666/151‑1 (MQ=255) aCTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGAt < 2:458283/151‑1 (MQ=255) aCTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGAt < 2:1527691/151‑1 (MQ=255) cTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATa < 2:1043375/151‑1 (MQ=255) cTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATa < 2:1393426/151‑1 (MQ=255) ggCGGTGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACATGACCGCTGGCGGCGGACCCCGTTTCGCTGCCTTTCAGCGAAACGGGGAAACGGCCGGCATAAAGCAAAACGCTACCGAACCT‑TGTTAAt > 2:843398/1‑151 (MQ=255) gagaCGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGc < 2:753707/150‑1 (MQ=255) gagaCGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGc < 1:1440543/150‑1 (MQ=255) gaCGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGAACGCTGGCGTCGGACACCGGTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCCGCATAACGCAAATCGTTACCGACCCT‑TTATAATTGCTGa > 1:1093701/1‑151 (MQ=255) cGGTTAACAAATAGCGGCTCGGTTTATCGGCGGG‑GGGGGGAATTAAAGCCAAATCAACGCCGCGGGCGGAAACCCGTTTGCTGGATTCCCGCGGCAACGGGTAACCTCCGGCATAACGCAAATCGGTACTGACCATATGA‑AAATGCTGAg > 1:1423584/1‑150 (MQ=255) cGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCCACCAT‑TGATAATTGCTGAgg > 2:1454250/1‑150 (MQ=255) gTTAACAAATAGCGGCTCGGTTTATCGGCGGG‑GGGGAGATTTTACGCCACAAGACCGCGGGCGTCGGACACCGTTTCGCTTGCTTTCAGCGGCAAGGGGGAAAATCCGGCATAAAGGCAATAGGTACCGACCCT‑TGATTATTGCTGAgcc > 2:1062972/1‑149 (MQ=255) gTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACATGGCCGCTGGCGTCCGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAAAGCAAATCGTTACCGACCCT‑TGATAATTGCTGAgcg > 2:203618/1‑150 (MQ=255) gTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGGCAAGGGGAAACGTCCCGCATAAAGCAAATCCTTACCGACCCT‑TGGTAATTTCCGAggg > 2:251025/1‑148 (MQ=255) gTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGGTTTGCTGCCTTTCAGCGACACGGGGAAAAGGCCGGCATAACGCAAATCGTTACCGACCAT‑TTATAATTTCTGAgcg > 1:1599420/1‑150 (MQ=255) cAAATAGCGGCTCGGTTTATCGGCGGT‑GGGGCGATTTAACCCCACATTCCCGGTCGGGGCCGACACCGTTTTGCCGCCTTCCAGCGGCACGGGGACACGGTCCGCATAACGCAAAATCTTACCGCCCAA‑TTATAATTGCTCAGCGCCCaaa > 1:1764624/1‑151 (MQ=255) cAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGGGATTTTACGCCACATGACCGCTGGCCGCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAAAGTCCGGCATAACGCAAATCGTTACCGACCCT‑TGATAATTGGTGAGGGCGCcaa > 2:351071/1‑151 (MQ=255) gCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAACTTAACTg < 2:1096099/150‑1 (MQ=255) gTTTATCGGCGGC‑GGGGCGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGGAACGTCCGGCATAACGCAAATCGTTACCCACCAT‑TTATAATTGCTGAGCGCGCAAACTTAACTGCAcgcg > 1:1348247/1‑151 (MQ=255) gTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACCCGGGGAAAAGTCCGACATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAAATTAACTGCAcgcg > 2:1746054/1‑151 (MQ=255) gTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAACTTAACTGCAcgcg > 1:1704896/1‑151 (MQ=255) gTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAACTTAACTGCAcgcg > 1:1445733/1‑151 (MQ=255) gcggc‑ggGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCAtttt > 1:700375/1‑151 (MQ=255) ggc‑ggGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCAtttttt > 1:896926/1‑151 (MQ=255) gggAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCATTTTTTAcc < 2:67013/150‑1 (MQ=255) | CTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGC‑GGGGAGATTTAACGCCACATGACCGCTGGCGTCGGACACCGTTTCGCTGCCTTCCAGCGACACGGGGAAACGTCCGGCATAACGCAAATCGTTACCGACCAT‑TGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCATTTTTTACC > NC_000913/2332676‑2332969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |