| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3592584 = | NA (NA) | 7 (0.070) | 7/268 | 8.4 | 7.3% | noncoding (21/99 nt) | RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | 3592648 = | 89 (0.900) | noncoding (85/99 nt) | RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3592746‑3592584‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggcctgataagCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTAC > NC_000913/3592648‑3592795 GAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGT > 1:1274999/1‑151 GTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGG > 2:1131630/1‑151 GTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGG > 2:1185203/1‑151 GTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGG > 2:523548/1‑151 TGCGTATTTAGGCGGGTAATGACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAG < 2:1317460/149‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGG < 1:1676676/150‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGG < 1:1721673/150‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAG < 2:1291102/149‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAG < 1:636151/149‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAG < 2:1583946/149‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAG < 1:365717/149‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAG < 2:482485/149‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAG < 1:271720/149‑1 TGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAG < 2:72753/149‑1 CGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCC < 1:338423/150‑1 CGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGC > 1:1451654/1‑149 GTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGG < 1:1164917/147‑1 GTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGCGACAAATGTAAAATTGCCTGATGGGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGG > 2:1165487/1‑147 GGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAGCGC > 2:1556183/1‑148 GGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAGCGC < 1:1555436/148‑1 TAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAGCGCAGCG < 2:633926/150‑1 TCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACC < 1:819402/151‑1 CTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGG < 2:663570/151‑1 TGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGAC < 1:281056/150‑1 ACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTT > 2:1129186/1‑150 TAGGCCTAATAAGCGACGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGG < 1:633634/151‑1 GGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAA > 2:541190/1‑151 GCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAA < 1:419223/150‑1 GCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAA < 1:1014896/150‑1 GCCTGATAAGCGCAGCGCATCAGGCAATTTTAAATTTGTCGCCTGTCTCAAAGGAGTCTTTGGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGGTTCATTCGCCAGCAGCGCATCACCAGTATCGGAA < 1:751375/150‑1 CTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAG > 2:1501269/1‑150 GATATGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCA > 1:1315158/1‑150 GATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCA > 1:1309376/1‑150 ATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCAC < 2:19785/150‑1 AAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTAC < 1:93688/151‑1 GAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTACTGGGTGAGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCTGATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3592746‑3592584‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggcctgataagCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTAC > NC_000913/3592648‑3592795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |