Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 147,727 Δ12 bp coding (760‑771/903 nt) yadD → transposase_31 family protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 147727 147738 12 108 [0] [0] 108 yadD transposase_31 family protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1477260 (0.000)104 (0.990) 66/284 0.1 100% coding (759/903 nt) yadD transposase_31 family protein
?NC_000913 147739 = 0 (0.000)coding (772/903 nt) yadD transposase_31 family protein

Only 100 of 108 total aligned reads displayed.

CGGAAGTCAGTTAGTTGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAC  >  NC_000913/147579‑147875
                                                                                                                                                   |                                                                                                                                                     
cGGAATTCAGTTAGTTGCCATGCAAAACTATATGCTGCATCGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTTTATGATGACGCTGGCGCAGTGTTTTGAAGAGAAAGGGATTc                                                                                                                                                      <  2:443344‑M1/149‑2 (MQ=255)
    aGTCAGTTAGTTGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagg                                                                                                                                                >  1:154263‑M1/1‑144 (MQ=255)
      tCAGTTAGTTGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcaggga                                                                                                                                              <  2:182563‑M1/151‑10 (MQ=255)
         gttagttGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaaga                                                                                                                                           >  2:953296‑M1/1‑139 (MQ=255)
          ttagttGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaag                                                                                                                                            <  1:948777‑M1/149‑12 (MQ=255)
              ttGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacagg                                                                                                                                       <  1:488599‑M1/150‑17 (MQ=255)
              ttGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacag                                                                                                                                        <  2:522499‑M1/149‑16 (MQ=255)
                  cATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagta                                                                                                                                  <  2:1611338‑M1/151‑22 (MQ=255)
                   aTGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaa                                                                                                                                 >  1:1360412‑M1/1‑129 (MQ=255)
                     gCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagt                                                                                                                               >  2:241899‑M1/1‑127 (MQ=255)
                     gCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagt                                                                                                                               >  1:1695434‑M1/1‑127 (MQ=255)
                     gCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagt                                                                                                                               >  2:237482‑M1/1‑127 (MQ=255)
                      cAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtc                                                                                                                              <  2:738154‑M1/151‑26 (MQ=255)
                        aaaCTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGATACAGGGTCTCGGGAGGGGCGTCTATGATGACGCTGGCGCTGTGGTTTGAGGAGTAAGGGATTcagcagggaaggcaagaagtaagtcag                                                                                                                            >  1:1213291‑M1/1‑124 (MQ=255)
                        aaaCTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcgg                                                                                                                            >  1:1390975‑M1/1‑124 (MQ=255)
                        aaaCTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcag                                                                                                                            >  1:358157‑M1/1‑124 (MQ=255)
                          aCTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcagga                                                                                                                          >  2:1719068‑M1/1‑122 (MQ=255)
                          aCTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcagga                                                                                                                          >  1:1360740‑M1/1‑122 (MQ=255)
                           cTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaa                                                                                                                         >  1:1578923‑M1/1‑121 (MQ=255)
                           cTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaa                                                                                                                         <  2:322127‑M1/151‑31 (MQ=255)
                           cTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaa                                                                                                                         >  2:1656141‑M1/1‑121 (MQ=255)
                            tataTGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaat                                                                                                                        <  2:89507‑M1/151‑32 (MQ=255)
                             atatGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaatt                                                                                                                       >  1:1349335‑M1/1‑119 (MQ=255)
                               atGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcg                                                                                                                     >  2:649614‑M1/1‑117 (MQ=255)
                                 gctgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgc                                                                                                                    >  2:390694‑M1/1‑115 (MQ=255)
                                 gctgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgc                                                                                                                    >  1:1118900‑M1/1‑115 (MQ=255)
                                  ctgcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgccc                                                                                                                  <  1:79209‑M1/151‑38 (MQ=255)
                                    gcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccag                                                                                                                >  1:1149246‑M1/1‑112 (MQ=255)
                                    gcAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagaaagtcaggaattcgcccag                                                                                                                >  2:764973‑M1/1‑112 (MQ=255)
                                         gcgGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgt                                                                                                             >  1:155239‑M1/1‑107 (MQ=255)
                                           ggTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtctt                                                                                                          >  2:1570987‑M1/1‑105 (MQ=255)
                                            gTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtctt                                                                                                          >  2:1324399‑M1/1‑104 (MQ=255)
                                             tCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctg                                                                                                       <  2:735598‑M1/151‑49 (MQ=255)
                                             tCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttct                                                                                                        <  2:1718978‑M1/150‑48 (MQ=255)
                                               aTACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgag                                                                                                     >  2:352031‑M1/1‑101 (MQ=255)
                                               aTACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgag                                                                                                     >  2:1429535‑M1/1‑101 (MQ=255)
                                               aTACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgag                                                                                                     >  1:407406‑M1/1‑101 (MQ=255)
                                                tACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagt                                                                                                    <  1:963856‑M1/151‑52 (MQ=255)
                                                tACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagt                                                                                                    >  1:1539860‑M1/1‑100 (MQ=255)
                                                tACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagt                                                                                                    >  1:303712‑M1/1‑100 (MQ=255)
                                                    gAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaag                                                                                                >  1:1133241‑M1/1‑96 (MQ=255)
                                                     aaCAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaagg                                                                                               <  1:469555‑M1/151‑57 (MQ=255)
                                                     aaCAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaagg                                                                                               <  2:220482‑M1/151‑57 (MQ=255)
                                                                  gTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGCTGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaa                                                                                  >  1:809881‑M1/1‑82 (MQ=255)
                                                                  gTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaa                                                                                  >  1:316497‑M1/1‑82 (MQ=255)
                                                                  gTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaa                                                                                  >  1:1042094‑M1/1‑82 (MQ=255)
                                                                     ttACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagac                                                                               <  1:61154‑M1/151‑73 (MQ=255)
                                                                     ttACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagac                                                                               <  1:126370‑M1/151‑73 (MQ=255)
                                                                       aCGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgt                                                                             <  1:1054727‑M1/151‑75 (MQ=255)
                                                                       aCGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgt                                                                             >  1:1362938‑M1/1‑77 (MQ=255)
                                                                          gtgtgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttg                                                                           >  1:54325‑M1/1‑74 (MQ=255)
                                                                          gtgtgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttg                                                                           >  2:1239290‑M1/1‑74 (MQ=255)
                                                                            gtgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcaa                                                                        >  2:1077151‑M1/1‑72 (MQ=255)
                                                                            gcgttgAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcag                                                                        >  2:60432‑M1/3‑72 (MQ=255)
                                                                             tgtTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcag                                                                        <  2:1349970‑M1/150‑80 (MQ=255)
                                                                               ttGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggatgacgttgcagag                                                                      <  1:356400‑M1/150‑82 (MQ=255)
                                                                                             aaCGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacct                                                       <  1:351915‑M1/151‑97 (MQ=255)
                                                                                              aCGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctc                                                      <  2:666598‑M1/151‑98 (MQ=255)
                                                                                              aCGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctc                                                      <  2:871075‑M1/151‑98 (MQ=255)
                                                                                              aCGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctc                                                      <  1:188874‑M1/151‑98 (MQ=255)
                                                                                               cGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacct                                                       >  2:544620‑M1/1‑53 (MQ=255)
                                                                                                     gggagTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctg                                                <  2:192271‑M1/150‑104 (MQ=255)
                                                                                                         gTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagatt                                           >  2:269830‑M1/1‑43 (MQ=255)
                                                                                                         gTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagatt                                           >  1:668712‑M1/1‑43 (MQ=255)
                                                                                                          tCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagat                                            <  1:102124‑M1/149‑108 (MQ=255)
                                                                                                          tCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagat                                            <  2:251734‑M1/149‑108 (MQ=255)
                                                                                                          tCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagat                                            <  1:719331‑M1/149‑108 (MQ=255)
                                                                                                           cTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattga                                         >  2:231041‑M1/1‑41 (MQ=255)
                                                                                                            tATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgat                                        <  1:102854‑M1/151‑112 (MQ=255)
                                                                                                             atgatgACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgggtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgata                                       >  2:886174‑M1/1‑39 (MQ=255)
                                                                                                             atgatgACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagaga                                                                     >  2:1081548‑M1/1‑39 (MQ=255)
                                                                                                             atgatgACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagaga                                                                     <  1:1080992‑M1/121‑83 (MQ=255)
                                                                                                              tgatgaCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataa                                      <  1:1469313‑M1/151‑114 (MQ=255)
                                                                                                              tgatgaCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataa                                      <  2:561831‑M1/151‑114 (MQ=255)
                                                                                                                atgaCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataagg                                    <  2:154312‑M1/151‑116 (MQ=255)
                                                                                                                 tgaCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggt                                   <  1:885992‑M1/151‑117 (MQ=255)
                                                                                                                   aCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaa                                 <  2:65314‑M1/151‑119 (MQ=255)
                                                                                                                   aCGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaa                                 >  2:946947‑M1/1‑33 (MQ=255)
                                                                                                                    cGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaat                                >  1:1713605‑M1/1‑32 (MQ=255)
                                                                                                                         gcgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaac                            <  2:808637‑M1/150‑124 (MQ=255)
                                                                                                                         gcgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaac                            <  2:1018120‑M1/150‑124 (MQ=255)
                                                                                                                         gcgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaac                            <  1:1561678‑M1/150‑124 (MQ=255)
                                                                                                                         gcgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaac                            <  1:1428865‑M1/150‑124 (MQ=255)
                                                                                                                         gcgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaac                            <  1:1172999‑M1/150‑124 (MQ=255)
                                                                                                                         gcgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaac                            >  2:1259929‑M1/1‑27 (MQ=255)
                                                                                                                          cgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagggatggcaaatttacctcttgctgagattgataaggtaattaacc                           <  1:85709‑M1/150‑125 (MQ=255)
                                                                                                                          cgcAGTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaacc                           <  1:987052‑M1/150‑125 (MQ=255)
                                                                                                                              gTGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatt                      >  2:1646703‑M1/1‑22 (MQ=255)
                                                                                                                               tGGTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcggagatggcaaatttacctcttgctgagattgataaggtaattaaccttattt                     <  1:360641‑M1/151‑131 (MQ=255)
                                                                                                                                ggTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttattta                    >  2:1213612‑M1/1‑20 (MQ=255)
                                                                                                                                ggTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttattta                    >  1:785795‑M1/1‑20 (MQ=255)
                                                                                                                                ggTTTGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttattta                    >  1:491647‑M1/1‑20 (MQ=255)
                                                                                                                                   ttGAAGAGAAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatttaagt                 <  2:432742‑M1/151‑135 (MQ=255)
                                                                                                                                        gagaAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatttaagttac              >  2:443641‑M1/1‑12 (MQ=255)
                                                                                                                                        gagaAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatttaagttac              >  1:281187‑M1/1‑12 (MQ=255)
                                                                                                                                          gaAAGGGATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatttaagttac              >  1:1219110‑M1/1‑10 (MQ=255)
                                                                                                                                               ggATTcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatttaagttacctgtgttat     >  1:1065967‑M1/1‑5 (MQ=255)
                                                                                                                                                  ttcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatttaagttacctgtgttatgac  <  2:54348‑M1/151‑150 (MQ=255)
                                                                                                                                                  ttcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatttaagttacctgtgttatgac  <  1:1052288‑M1/151‑150 (MQ=255)
                                                                                                                                                  ttcagcagggaagacaggaagtaagtcaggaattcgcccagcgtcttctgagtaaaggaatgtctcgggaagacgttgcagagatggcaaatttacctcttgctgagattgataaggtaattaaccttatttaagttacctgtgttatgac  <  1:304455‑M1/151‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CGGAAGTCAGTTAGTTGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAAGTTAC  >  NC_000913/147579‑147875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: