| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,443,277 | 0 | A | C | 45.1% | 126.0 / 50.5 | 91 | V274G (GTA→GGA) | secY | preprotein translocase membrane subunit |
| Reads supporting (aligned to +/- strand): ref base A (47/3); new base C (0/41); total (47/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.97e-23 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAATA > NC_000913/3443128‑3443424 | cAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTa > 1:157470/1‑150 (MQ=255) aCGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTAccc < 2:970741/150‑1 (MQ=255) cGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGCAGCGAAGATTGCCGGG‑ATTAcccc > 1:622861/1‑150 (MQ=255) aTAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGcc < 1:249438/151‑1 (MQ=255) gagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCata > 2:344317/1‑151 (MQ=255) gagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCata > 2:1037765/1‑151 (MQ=255) gagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCata > 1:526597/1‑151 (MQ=255) gagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCata > 2:733253/1‑151 (MQ=255) gagTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCata > 2:868902/1‑151 (MQ=255) gTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATAtt > 2:925395/1‑151 (MQ=255) cacaTAAAGGGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCa > 1:669480/1‑149 (MQ=255) cacaTAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCa > 2:145910/1‑149 (MQ=255) acaTAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACtt > 2:631791/1‑151 (MQ=255) caTAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACttt > 2:1206837/1‑151 (MQ=255) aaaaaggCGGTCCCCCGGGCTGAAAACACAG‑AAAATTGTTGTCCAGCCATTCCCAACCATCCCCCCCCCCGAA‑CC‑ATGCCGGGGTGGTCCCCGGAAAAAAAATAATTCGGGAAGAGAAGTTCGCGGTA‑ATCCCCCCCGCCATATTCACttt < 1:641501/145‑1 (MQ=255) ggTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTa > 1:1305433/1‑151 (MQ=255) gTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTaa > 1:442327/1‑151 (MQ=255) gTTCCCCAGGCTGAAAACACAGCAAATTTGTTGC‑CAGCAAGTCCCACCCAGTCCCGCCCCCGAC‑CC‑ATGCGGGGATGGTCGCCGGAAAAAAAATAATCCTGGAAGGGAATTTGGCGGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTa < 1:289804/150‑1 (MQ=255) ccagccagCAAATCCAGCGAATTTGTTGT‑CAGCCATTCCCAACCA‑ACCCCCCCCCAAA‑CCAATGCCGCGATGTTCGCCGGAAACAAAATAATACTGGAAGCAAATTTGGCCGGA‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAAtgtg < 1:1281094/151‑1 (MQ=255) cgaaaaaaACAGCAAAATTGTTGT‑CGGCCATTCCCACCCAGTCCCGCCCCCAAA‑CC‑AGGACGCGGTGGTCGCGGGGAACAAAATAATAGGGGAGGGGAAGTTGGCGGGG‑TTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGctc < 1:405138/147‑1 (MQ=255) cgaaaaaTACAGCGAATTTGTTGT‑CAGCCATTCCCAACCATCCCCCCCCCCGAA‑CC‑AGGACGCGGGGGTCGCCGGAAAAAAAATAAGACGGGAAGCGAAAATGGCGGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGctc < 2:346504/147‑1 (MQ=255) cTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGct > 2:396120/1‑150 (MQ=255) cTGAAAATACAGAAAAATTGTTGT‑CAGCCAGTCCCACCCAGTCCCCCCCCCGAA‑CC‑ATGACGCGAGGGTCGCGGGAAACAAAATAATACGGGAAGGAAAGTTTGCCGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGctc < 2:876885/151‑1 (MQ=255) gCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGct > 1:1247191/1‑148 (MQ=255) aaaaCAGCAAATTTGTTGT‑CAGCCATTCCCACCCAGTCCCCCCCCCAAC‑CC‑AGGCCGGGAGGGCCGCGGGAAAAAAAAAAATACTGGAAGCGAAGATTGCCGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgc < 2:526817/148‑1 (MQ=255) acggcaaatttgttgC‑CAGCCATTTCCACCCAGTCCCGCCCCCGAA‑CA‑ATGGCGCGATGGCCGCCGGAAAAAAAATAATCCGGGAAGCAAAGTTGGCGGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTgcagc < 2:391116/142‑1 (MQ=255) gaaatttgttgT‑CAGCCAGTCCCAACAAGCCCCCCCCCCGAA‑CC‑ATGACGGGAGGGCCGCCGGGAAAAAAAAAATACGGGAAGCGAATATTGCCGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCAt < 2:1132314/144‑1 (MQ=255) caaatttgttgC‑CAGCCAGCACCAACCAGTCCCGCCCCCAAC‑CA‑ATGACGCGATGGTCCCCGGAAACAAAATAATGTTGGAAGCGAATTTTGCGGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCAt < 1:147878/144‑1 (MQ=255) aaaatttgttgC‑CACCCAGTCCAACCCAGCCCCCCCCCCAAC‑CC‑AGGACGCGATGGCCGCGGGAAACAAAAAAATCGGGAAAGGAAATATGGCGGGG‑TTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCAt < 1:1693306/144‑1 (MQ=255) gaaattttttgccggCCAGTCCCACCCAGTCCCCCCCCCAAA‑CC‑ATGACGCGATGGCCGCCGGGAAAAAAAAAATCCGGGAAGCGAAGATGGCCGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCAt < 2:175539/135‑1 (MQ=255) ataTTGTTGG‑CGGCCAGTTCCACCAAGTCCCGCCCCGGAC‑CC‑GTGGCGCGGTGGTCCCCGGAAACAAAATAATAGTGGAAGCGAAGTTTGCGGGG‑TTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGac < 1:497010/149‑1 (MQ=255) aatttgttgT‑CAGCCAGTTCCACCCAGCCCCCCCCCCGAA‑CC‑ATGCCGCGTTGGTCGCGGGAAAAAAAAAAATACTGAAAGGAAAGATTGCGGGT‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGac < 2:115992/148‑1 (MQ=255) aaaTTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGa > 2:158615/1‑150 (MQ=255) aaaTTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGa > 1:797242/1‑150 (MQ=255) aaaTTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGa > 2:1334348/1‑150 (MQ=255) attttttgt‑CAGCCTGTCCCACCCAGTCCCCCCCCCGAA‑CC‑ATTACGCGATGTTCGCCGGGAACAAAATAATCCTGGAAGCAAAGATTGCCGGG‑TTCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGaca < 1:946868/146‑1 (MQ=255) atttgttgT‑CAGCCAGTCCCACCCACCCCCCCCCCCAAC‑CA‑AGGACGCGATGGTCGCCGAGAACAAAATAATACGGGAGGGAAATATGGCGGGG‑TTCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGaca < 1:370147/149‑1 (MQ=255) aaTTTTTTT‑CACCCAGTTCAACCCAG‑CCCCCCCCCGAACCC‑AGGACGGGATGGCCGCGGGAAACAAAATAATACGGGAAGGGAAGATTGCAGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGaca < 2:10596/151‑1 (MQ=255) ttgt‑CAGCAAGTCCAAACCAGTCCCGCCCCCAAA‑CC‑AGGAGGGGATGGTCGCCGGAAAAAAAAAAATACGGGAAGCAAAGATTGCCGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACacgac < 2:1190430/150‑1 (MQ=255) cAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGtt > 2:1153583/1‑151 (MQ=255) aaCCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGttt > 1:808438/1‑151 (MQ=255) aaCCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGttt > 2:1064204/1‑151 (MQ=255) gTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGt > 2:1688285/1‑151 (MQ=255) tcccGCCCCCAAC‑CC‑GGGACGCTAGGGTCGCCGGAAACAAAATAATTCTGGAAGCGAATATTGCCGGG‑ATCCCCCCCGCTATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGt < 1:1194235/148‑1 (MQ=255) ccccccGAC‑CC‑AGGGCGCGTTGTTCCCCGGAAACAAAAAAATTCTGGAAGCAAAGATTGCGGTG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGttt < 1:400085/150‑1 (MQ=255) cccccGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTa > 2:492227/1‑151 (MQ=255) cccccGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTa > 1:1399916/1‑151 (MQ=255) ccccGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTa > 1:1684442/1‑150 (MQ=255) caaa‑CC‑ATGACGGGGTGGCGGCGGGAAAAAAAATAATACTGGAAGCAAAGATTGCGGGG‑ATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACcac < 2:808893/149‑1 (MQ=255) caaa‑CC‑ATGACGCGATGGGCCCGGGGAAAAAAATAACCGGGGAAGAAAATGTTGCCGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACcac < 2:1719433/149‑1 (MQ=255) caaa‑CC‑AGGACGCGAGGGTCGCGGAGAAAAAAATAATGCTGGAAGAAAAGTTGGCCGGG‑ATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACcac < 1:563798/149‑1 (MQ=255) caacccatgcgggggtGGCCGCGGGAAAAAAAATAATACTGGAAGAAAATTTTGCGGGT‑ATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACcac < 1:241626/136‑1 (MQ=255) caaacgatggggtgATGGGCCCGGGGAACAAAAAAAGCCGGGAAGGGAAGATCGCGGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACcac < 2:481314/138‑1 (MQ=255) aa‑CC‑AGGACGGGATGGTCGCCGAAAAAAAAATAAGAGGGGAAGCGAAGAGTGCGGGG‑TTTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACaa < 2:1222528/151‑1 (MQ=255) a‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAAt > 1:382706/1‑151 (MQ=255) c‑ATGCCGGGAGGGTCGCCGGAAAAAAAATAATACGGGAAGGGAAGATTGCGGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATgc < 2:1158612/151‑1 (MQ=255) cgcgATGGTCGCGGGGAAAAAAATAATACGGGAAGCGAAGTTGTCCGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGt < 2:1684794/151‑1 (MQ=255) cgggaaaaaaaataatCTTGGAGGAGAAGTTTGCGGGG‑TTCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCt < 1:112198/140‑1 (MQ=255) gAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca > 2:1662579/1‑151 (MQ=255) gAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca > 2:1215207/1‑151 (MQ=255) gAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca > 1:652327/1‑151 (MQ=255) gAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca > 1:27455/1‑151 (MQ=255) aaaaagaaaaaagggggaagggaagGTTGCCGGG‑ATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTcaaca < 2:83180/136‑1 (MQ=255) cAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACGCGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAAt > 2:850233/1‑151 (MQ=255) aGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 2:275576/1‑151 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAGATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 1:1457831/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTTAACAAATa > 2:1065428/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 2:1722420/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 2:523244/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 1:1038937/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 2:151743/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 2:147702/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 1:1115284/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 1:54958/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATa > 2:1145485/1‑150 (MQ=255) gAATAATACTGGAAGCGAAGATCGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAAAGCGGCGTTGACCACGCTCAACAAATa > 1:369943/1‑150 (MQ=255) aaataatGCTGGAAGAGAAGTTGGGCGGG‑ATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATac < 1:1119975/150‑1 (MQ=255) aaataatATTGGAAGCGAAGTTTGCGGTG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATac < 1:258176/150‑1 (MQ=255) aaataatACGGGAAGGAAATGTTGCGGGT‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATac < 1:1282133/150‑1 (MQ=255) aaaaaatcCTGGAGGCGAAGTTCGCGGGG‑ATCCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATac < 2:1587763/147‑1 (MQ=255) ataataCTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATacaa > 1:1577967/1‑151 (MQ=255) tgggAAGCGAAGAGTGACGGG‑TTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGa < 1:1516024/149‑1 (MQ=255) gacgctaattttGCGGGT‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAAc < 1:492040/140‑1 (MQ=255) caaagttGGCGGGAATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTc < 2:1351201/144‑1 (MQ=255) aaGATTGGCGGG‑TTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTg < 1:750190/151‑1 (MQ=255) ttgggggag‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCaa < 1:1623366/143‑1 (MQ=255) ccGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaata < 1:1273296/150‑1 (MQ=255) ccGGG‑ATTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaata < 1:331049/150‑1 (MQ=255) cGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCACTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaata > 2:1057737/1‑149 (MQ=255) ggg‑TTTCCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatact < 2:1272932/150‑1 (MQ=255) gg‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatactaa > 1:1605942/1‑151 (MQ=255) g‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatactaat > 2:960234/1‑151 (MQ=255) aCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatactaata > 2:1289543/1‑148 (MQ=255) aCCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAaatactaata > 1:579341/1‑148 (MQ=255) | CAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGT‑CAGCCAGTTCCAACCAGTACCGCCCCCGAA‑CC‑ATGACGCGATGGTCGCCGGGAACAGAATAATACTGGAAGCGAAGATTGCCGGG‑ATTACCCCCGCCATATTCACTTTCAGCGGTAAATGTGTGCTCTGTGCAGCATAGACACGACGACCTTGCTGACGTTTCGCGTAGTTTACCACAATGCGGCGTTGACCACGCTCAACAAATACAACAAAGAACGTCACTGCAAATACTAATA > NC_000913/3443128‑3443424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |