| Read alignment evidence... | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | A | a | var freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,622,250 | 0 | A | A | G | 38.6% | 501.9 / 127.3 | 277 | E161G (GAG→GGG) | yjjJ | putative protein kinase |
| Reads supporting (aligned to +/- strand): major Allele A (15/155); minor allele G (106/1); total (121/156) | ||||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | ||||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | ||||||||||||
Only 100 of 297 total aligned reads displayed.
CGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCAAACCGCGGTCAGCCAACGTTGGGGTGACCTGCTAATTGC > NC_000913/4622006‑4622499 | gTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAAt < 2:3486060/250‑1 (MQ=255) cTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAg < 2:2076594/250‑1 (MQ=255) gggAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTa < 1:4630123/237‑1 (MQ=255) ttGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGcac < 2:5399310/251‑1 (MQ=255) tCTGGTAACGGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCGGGTATGTGACAGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCacaac < 1:2545885/251‑1 (MQ=255) ggCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGGGGGGGATTATCAGCGAAGGGTTACTGCacaaa > 1:1465501/1‑240 (MQ=255) gCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTGTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCctct < 1:4181357/250‑1 (MQ=255) ggTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTTGGTT‑GG‑CGGGGGGGGGGAATATTAGCGGAGGATTAATGcaccaaac > 1:711559/1‑208 (MQ=255) ttGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTTGTT‑GGTCGGGGGGGGGGGGTATCAACGAAGGGTTACTGGacaaaaa > 1:4218549/1‑207 (MQ=255) gCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTTGGGTGGGGGGGGGGAATT‑TCAGCGTTGTATTACTGccc > 1:4970709/1‑201 (MQ=255) gCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGc < 2:2289852/188‑1 (MQ=255) cccTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑TGTCGGGGGGGGGAGTTATTAGCGATGGGTTaa > 2:1698000/1‑196 (MQ=255) cccTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTAc < 1:1698305/197‑1 (MQ=255) cccTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACa < 2:2830680/251‑1 (MQ=255) gTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTTGGGGGGGGGGAATATTAGGGAGGGGTTAATgg > 2:3257562/1‑194 (MQ=255) gTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGc < 1:3258079/195‑1 (MQ=255) gTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGGGGGGGGGGGGGAATATTAGCGATGGAGTACTGCCCAAAAACCTGC‑GGGAAATTCTCTGGGTCAAAAAACTAACCATTACCAACaacgtg > 2:5315525/1‑246 (MQ=255) gTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGGGGGGGGGGGGAAATATCAGGGATGGGTTAATGGACAAAACCCTGC‑GGGAAATCCTCTGGAGCAAAAAAACACCCATTAAGaaaaacggg > 1:1837869/1‑244 (MQ=255) ttGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAg < 2:1115232/251‑1 (MQ=255) aCCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGGT‑TGGCGGGGGGGGGGATTATTAACGAAGGATTAATGCACAAAAACCCGC‑GGGAAATTCTCTGGGTAAAAAAAAAACCCCTTACGAAAAACAGGCaaaggg > 1:2263051/1‑247 (MQ=255) aTCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCGACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGa < 1:1343494/247‑1 (MQ=255) tctcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAc < 2:3729658/251‑1 (MQ=255) gCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAacac < 2:4715336/176‑1 (MQ=255) gCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAAc < 2:839345/219‑1 (MQ=255) cgcgTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAacac < 2:3309029/163‑1 (MQ=255) gggCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTa < 2:4424545/132‑1 (MQ=255) gggCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAacac < 1:2056179/157‑1 (MQ=255) ggCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGa < 2:4216552/164‑1 (MQ=255) ggCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGGCGGGGGGGGGAATTATCAGCGGTGGAt > 2:4528554/1‑143 (MQ=255) ggCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGGT‑GGGCGGGGGGGGGGAATATTAGCGATGGGTTACTGCACAACACCCCGC‑GGGAATTCCTCTGGATCAAAAAATCACCCATTACAAACAGCTGGCAAGTGAAGCAC‑TGGCAGGGGGAAATTTGGGGttttttt > 1:4933820/1‑242 (MQ=255) gAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTTGTT‑GGTCGGGGGGGGGGAATATTAGCGAGGGGGTATTGGCCAAAACCCCGC‑GGGAAATTCTCTTGGTCAAAAAATCACCCCCTACGAAAAACAGGGCAATGAAGGAA‑TGGGA‑GGAGGAAATGTTGGTtgttcttgtggtttttttt > 2:3428929/1‑238 (MQ=255) gAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGGGGGGGATTATTAGCGATGGGTTACTGcac > 1:552572/1‑146 (MQ=255) gAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGcac < 2:552462/146‑1 (MQ=255) cAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGc < 2:680898/118‑1 (MQ=255) aCTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGGGGGAAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCa < 1:2082804/202‑1 (MQ=255) gAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATc < 1:1292271/110‑1 (MQ=255) gAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCacaac < 1:3908253/131‑1 (MQ=255) gAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAacac < 2:3356296/133‑1 (MQ=255) gAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGGGGGGGGGGGGGATTATCAGCGATGGGTTTTTGCacaac > 2:3907600/1‑131 (MQ=255) ctgaTGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTAAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑gg < 2:2977492/132‑1 (MQ=255) gatgatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGa < 2:4666959/179‑1 (MQ=255) atgatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTTGTT‑GGTTGGGGGGGGGGAATATCAGCGATTGGGTTCTTCCCAAACCCCCGCGGGAAATTCCCCGGGTTCAAAAA‑TTACCCACTATGAAAAACCGGCAAGTGATGCAC‑TTGCC‑GGAGAAAATGTGGGGTCTTTTTCGGGGGGCGCGCCA‑CCC‑AAAATTATCCACCCTGCACaaaaa > 1:4670055/1‑249 (MQ=255) atgatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTTGTT‑GGTCGGGGGGGGGGAATATTAGCGCTGGATTACTGCACAACACCCCGC‑GGGAATTTCTCTGGGTCAAAAAATCACCCATTACGAACAGCCGGCCAGAGATGCCCGTCGC‑‑GGGGAAAATGTGGGGGCTTTTGCTGGCGGCGAGCAGCCCA‑AAATTTAccaaaattgacaaaaa > 1:2017160/1‑237 (MQ=255) atgatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGcac < 2:4845669/246‑1 (MQ=255) atgatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACg < 2:1837532/251‑1 (MQ=255) agatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCATATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACAccc < 1:3625785/122‑1 (MQ=255) gatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGGT‑GGGCGGGGGGGGGGAATATTAGGGATGGAGTTCTGCACCAAAACCTGC‑GGGAAATcc > 1:2773541/1‑134 (MQ=255) atatACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTTGGT‑GGTCGGGGGGGGGGATTATCAGCGATGGGTTACTGCacaacaa > 1:3318536/1‑118 (MQ=255) atatACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑TGTCGGGGGGGGGAATTTTCAGCGATGGATTACTGCACAaaac > 1:293419/1‑119 (MQ=255) atatACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAacac < 1:373243/119‑1 (MQ=255) ataCGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTc < 2:1401727/251‑1 (MQ=255) gTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCgggga < 1:385021/79‑1 (MQ=255) gTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGcac < 1:937820/108‑1 (MQ=255) gTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑GTTGGT‑GGTCGGGGGGGGGGATTATTAGCGATGGAGTTATGCACAACAccc > 2:1207291/1‑115 (MQ=255) ggAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAacac < 2:5772885/103‑1 (MQ=255) ggAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGa < 1:5334412/159‑1 (MQ=255) ggAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATaa < 2:5911651/246‑1 (MQ=255) gaagaaGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAg < 1:5246866/147‑1 (MQ=255) gaagaaGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAAc < 1:4579047/247‑1 (MQ=255) gaagaaGATGTGCTCTACGCCCTGAACGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATaaa < 1:1153971/246‑1 (MQ=255) aagaagATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTa < 1:5308887/76‑1 (MQ=255) aagaagATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAacac < 2:4618574/101‑1 (MQ=255) aagaagATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAAc < 1:3960066/129‑1 (MQ=255) aagaagATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAg < 1:235486/146‑1 (MQ=255) gaTGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGGGGGGAAATATCAGCGGTGGGTTACTGCACAACACCCCGC‑GGGAATTTCCCTGGATCAAAAAATCACCCATTACGAACAGCTGGCAAg > 1:83263/1‑149 (MQ=255) gaTGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑GTGGGT‑GGGCGGGGGGGGGGAATATTAGCGATGGATTACTGcac > 2:3190405/1‑91 (MQ=255) gCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTTGGT‑GGCCGGGGGGGGGGATTATTATCGATGGGTTACTg > 1:3116189/1‑83 (MQ=255) gCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCacaac < 1:4754345/89‑1 (MQ=255) gCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCa < 2:5111892/142‑1 (MQ=255) gCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGaaa < 1:439739/164‑1 (MQ=255) gCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTgcgg < 2:4986976/182‑1 (MQ=255) gCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGGCTGGGGGGGGGAATATTAGAGGTGGGGTTCCGCACAACACCCCCC‑GGGAAATCCCCTGGGTCAAAAAATCCCCCCCTACCAACAACCGGGAAGGCCTCCAC‑CGTCA‑GGGGAAATTTTTGGGTTTTCTCCGGGCGGCGCGCCG‑CCACAAATTTACC‑CCTACTCACCAACGCCGGCAGGCCAaaaaaaattgctgtcatctt > 1:1609579/1‑235 (MQ=255) gCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGGT‑GGGCGGGGGGGGGGATTATTAACGGTGGGTTACTGCAAAACACCCCGC‑GGGAAATCCCCTGGGTCAAAAAATCACCCATTACGGAAAGCTggga > 1:5112764/1‑140 (MQ=255) ctctACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGa < 1:223682/146‑1 (MQ=255) cGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑Ggaga < 2:3788188/156‑1 (MQ=255) cGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGGCGGGGGGGGGGAATATTAGCGATGGGTTACTGCACAACACCCCGC‑GGGAATTTCTCTGGGTCAAAAAATCACCCCTTACGAACAACTGGCAAGGGATGGAC‑TGGGA‑GGAGAAAATTTGGGGTCTTCTGCGGGGGGGGGGCAG‑CCC‑AAAATTAACTACTATTGACAAAAGCCGGCAGGGAATAAACAAGGGTTTGTGGAAATTAcc > 1:609275/1‑250 (MQ=255) cccTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGc < 2:2747091/76‑1 (MQ=255) cccTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGcac < 2:5294062/207‑1 (MQ=255) gACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑TGGCGGGGGGGGGGAATATCAGCGATGGATTACTGCACAAAACCCCGC‑GGGAATTCCTCTGGATCAAAAAATCACCCCTTACGAACAACTGGCa > 1:5214305/1‑130 (MQ=255) gACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCa < 2:5213413/130‑1 (MQ=255) gTATTTAACGGTGAATATACTGGCGG‑TTTGTT‑TGGCGGGGGGGGGGATTTTTAAGGAAGGACTAATGCCCAAAACCCTGC‑GGGAATTTCTTTTGGTCAAAAACACACCCCCTACCAACAACTGGCAAGCGAATCAC‑CCGCA‑CGAGAAAATCTGGGTTCTTCTCCGGGGGGCCAGCAG‑CCA‑CAAATTACCCACTACTCACACACACCGTCAGCCAATAAAAATATGTTTGTGAAATTTTCCCTACCacaaca > 2:2662775/1‑251 (MQ=255) gTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACctac < 2:717014/192‑1 (MQ=255) tATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCaa < 2:4065449/251‑1 (MQ=255) aTTTAACGGTGAATATACTGGCGG‑TTGGGT‑GGGTGGGGGGGGGGATTATCAGCGATGGGTTATTg > 2:254396/1‑65 (MQ=255) tttAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCAAAc < 1:4496228/251‑1 (MQ=255) cGGTGAATATACTGGCGG‑TTGGGT‑GGTCGGGGGGGGGAAATATTAGCGAGGGATTAATGCCCAACAACCCGC‑GGGAATTTCTCTGGATCAAAAACTCACCCACTACGAACAACTGGGCAGGGATGCAC‑TGGCA‑GGGGAAATTGTGGGTTTTTTTgcgg > 2:2706204/1‑158 (MQ=255) gTGAATATACTGGCGG‑TTGGTT‑GGTGGGGGGGGGGGAATATTAGCGATGGATTACTGCACAAAACCCCGC‑GGGAATTCCTCTGGGTCAAAAAATCACCCATTACGAACAGCCGGCAAg > 2:5657720/1‑118 (MQ=255) gTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACCCCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAg < 1:5658660/118‑1 (MQ=255) gAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGttcttc < 1:866155/149‑1 (MQ=255) taCTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGt < 1:3473261/139‑1 (MQ=255) tGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCAAACCGCGGTCAGCCAACGtt < 1:1052031/251‑1 (MQ=255) ggCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAAc < 2:2187548/97‑1 (MQ=255) ggCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACATGTGTTGGTg < 2:2053542/210‑1 (MQ=255) ggtt‑ggtCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTc < 2:1324314/60‑1 (MQ=255) ggtCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGc < 2:2596348/181‑1 (MQ=255) ggtCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGGACCACAGCAAACCGCGGTCAGCCAACGTTGGGGTGAc > 1:5741457/1‑247 (MQ=255) ggtCGGGGAGGGGAATTATCAGCGATGGATTAATGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTTGGTTCTTCTGCGGGCGGCGAGAAG‑CCA‑AAATTAAACTACTATGCACAAAAGCCGTCCGGc > 1:2596779/1‑181 (MQ=255) ggggaggggaATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGcac > 2:890446/1‑163 (MQ=255) gggaggggaATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACAtg > 1:2719753/1‑186 (MQ=255) gaggggaATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAAtt < 1:3369950/146‑1 (MQ=255) | CGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGG‑TTGGTT‑GGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGC‑GGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCAC‑TGGCA‑GGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAG‑CCA‑AAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCAAACCGCGGTCAGCCAACGTTGGGGTGACCTGCTAATTGC > NC_000913/4622006‑4622499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |