| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,619,478 | Δ9 bp | coding (1250‑1258/1323 nt) | deoA → | thymidine phosphorylase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4619478 | 4619486 | 9 | 67 [0] | [0] 67 | deoA | thymidine phosphorylase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4619477 | 0 (0.000) | 64 (1.730) | 47/222 | 0.0 | 100% | coding (1249/1323 nt) | deoA | thymidine phosphorylase |
| ? | NC_000913 | 4619487 = | 0 (0.000) | coding (1259/1323 nt) | deoA | thymidine phosphorylase | |||||
CATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGCATTTATTAT > NC_000913/4619356‑4619622 | atctgacaccatcgattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTaaa < 1:94488‑M2/8‑1 (MQ=255) tctgacaccatcgattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAAc < 2:34712‑M2/9‑1 (MQ=255) cgattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATaaa > 1:368987‑M2/120‑139 (MQ=255) gattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAg > 2:171576‑M2/119‑139 (MQ=255) attacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGc > 2:216112‑M2/118‑139 (MQ=255) acagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCAcc > 1:598748‑M2/115‑139 (MQ=255) gcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGa > 2:708887‑M2/112‑139 (MQ=255) cgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGaa > 1:426772‑M2/111‑139 (MQ=255) cgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGaa > 2:413857‑M2/111‑139 (MQ=255) tcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAg > 1:221314‑M2/109‑139 (MQ=255) ggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCaa < 1:268413‑M2/3‑1 (MQ=255) ggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCaa > 2:268413‑M2/107‑109 (MQ=255) ggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGca > 2:723066‑M2/107‑139 (MQ=255) gctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGcac < 2:175059‑M2/34‑1 (MQ=255) actgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCaa < 1:786438‑M2/39‑1 (MQ=255) ctgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAAc < 2:617270‑M2/40‑1 (MQ=255) cgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCaa < 1:255780‑M2/39‑1 (MQ=255) cgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCaa > 2:255780‑M2/91‑129 (MQ=255) cgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCg > 1:87558‑M2/91‑139 (MQ=255) cgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGcc > 2:783113‑M2/89‑139 (MQ=255) tctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGACGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGt > 1:760937‑M2/87‑139 (MQ=255) ccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa < 1:626017‑M2/62‑1 (MQ=255) ccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 2:238649‑M2/78‑139 (MQ=255) caggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACCTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAAt < 1:480912‑M2/63‑1 (MQ=255) ggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa < 1:723066‑M2/65‑1 (MQ=255) ggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa < 2:760937‑M2/65‑1 (MQ=255) tagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg < 1:216112‑M2/67‑1 (MQ=255) tagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg < 2:614354‑M2/67‑1 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGta > 1:392715‑M2/70‑139 (MQ=255) gtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCaa > 2:756209‑M2/67‑105 (MQ=255) gtcagcgtccgctggcggtgatccacgcgaaagacgaaaacaactggcagtaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCaa < 1:756209‑M2/39‑1 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCa > 2:99151‑M2/65‑121 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCa < 1:99151‑M2/57‑1 (MQ=255) agcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa > 1:379317‑M2/64‑128 (MQ=255) agcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa < 2:379317‑M2/65‑1 (MQ=255) gcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATActgat < 2:294740‑M2/77‑1 (MQ=255) cgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATActgatc > 2:698885‑M2/62‑139 (MQ=255) ctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCa > 1:428551‑M2/56‑139 (MQ=255) ggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCAtt < 2:598748‑M2/86‑1 (MQ=255) cggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGGCGATAAAGCACCGGAAAGCACACCAACTGTCGATCGCCGTATCAGCGAATAACGGCATACTGATCTGATCATTTa > 1:520388‑M2/52‑139 (MQ=255) ggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTaa < 1:413857‑M2/89‑1 (MQ=255) cacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGaa < 2:684760‑M2/96‑1 (MQ=255) cgcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc < 2:392715‑M2/98‑1 (MQ=255) gcgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCa < 1:238649‑M2/99‑1 (MQ=255) cgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg > 1:221045‑M2/40‑106 (MQ=255) cgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg < 2:221045‑M2/67‑1 (MQ=255) cgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCAc < 2:368987‑M2/100‑1 (MQ=255) cgaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCAc < 2:87558‑M2/100‑1 (MQ=255) gaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 2:717212‑M2/39‑100 (MQ=255) gaaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa < 1:717212‑M2/62‑1 (MQ=255) aaagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTg < 1:649412‑M2/102‑1 (MQ=255) aagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGa < 1:165429‑M2/103‑1 (MQ=255) aagacgaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGa < 2:428551‑M2/103‑1 (MQ=255) gaaaacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACg < 2:524961‑M2/108‑1 (MQ=255) aacaactggcaggaagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag < 2:228329‑M2/111‑1 (MQ=255) aagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGca > 2:272637‑M2/16‑48 (MQ=255) aagcggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGca < 1:272637‑M2/33‑1 (MQ=255) cggcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGc < 2:426772‑M2/127‑1 (MQ=255) gcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa < 1:348944‑M2/62‑1 (MQ=255) gcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 2:348944‑M2/11‑72 (MQ=255) gcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag < 2:102908‑M2/111‑1 (MQ=255) gcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag > 1:102908‑M2/11‑121 (MQ=255) gcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGc > 2:426887‑M2/11‑137 (MQ=255) gcgaaagcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGc < 1:426887‑M2/127‑1 (MQ=255) agcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 2:581163‑M2/6‑67 (MQ=255) agcggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa < 1:581163‑M2/62‑1 (MQ=255) cggCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTTGATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACCGAGTACGGAGAACATATGAAACGTGCATTtattat < 2:242049‑M2/136‑1 (MQ=255) | CATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGCATTTATTAT > NC_000913/4619356‑4619622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |