Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,696,452 (A)5→4 intergenic (‑381/+10) uidA ← / ← uidR beta‑D‑glucuronidase/transcriptional repressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,696,4480A.100.0% 297.1 / NA 72intergenic (‑377/+14)uidA/uidRbeta‑D‑glucuronidase/transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (37/35);  total (37/35)

GGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTA  >  NC_000913/1696317‑1696580
                                                                                                                                   |                                                                                                                                    
ggAACGATAAGCTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAAGTACGATATGAAACGCGGGCACAGTTATCACCAGACCGCCGaaaagaga                                                                                                                               <  2:2039176/139‑5 (MQ=255)
    cGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCCCAGAGAAATTACGATCTGAAACGCGGGCACACTTATCACCAGCCAGCCGAAAAgagaaaga                                                                                                                          >  1:2039176/1‑139 (MQ=255)
      aTAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAAt                                                                                                                        <  1:320257/139‑1 (MQ=255)
      aTAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAAt                                                                                                                        <  2:632286/139‑1 (MQ=255)
       tAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATc                                                                                                                       >  2:1138342/1‑139 (MQ=255)
           ctctCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGa                                                                                                                   <  1:1598081/139‑1 (MQ=255)
               cATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCg                                                                                                               >  1:1307869/1‑139 (MQ=255)
                   aCATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTa                                                                                                           >  1:1384942/1‑139 (MQ=255)
                     atatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGaaaagaga                                                                                                                               <  1:1107143/118‑5 (MQ=255)
                     atatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGaaaagaga                                                                                                                               >  2:1107143/1‑114 (MQ=255)
                        tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATa                                                                                                      <  1:1138342/139‑1 (MQ=255)
                               aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa                                                                                               >  2:767764/1‑139 (MQ=255)
                               aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa                                                                                               <  2:11459/139‑1 (MQ=255)
                               aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa                                                                                               >  1:11459/1‑139 (MQ=255)
                                   aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat                                                                                           <  2:1995252/139‑1 (MQ=255)
                                   aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat                                                                                           >  1:895688/1‑139 (MQ=255)
                                           ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa                                                                                   >  1:1632334/1‑139 (MQ=255)
                                           ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa                                                                                   >  1:1915059/1‑139 (MQ=255)
                                           ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa                                                                                   >  2:1007533/1‑139 (MQ=255)
                                             ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt                                                                                 >  2:322224/1‑139 (MQ=255)
                                             ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt                                                                                 >  1:419272/1‑139 (MQ=255)
                                                           aGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGa                                                                                                        >  2:560014/1‑102 (MQ=255)
                                                           aGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGa                                                                                                        <  1:560014/102‑1 (MQ=255)
                                                                ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt                                                              >  1:1738717/1‑139 (MQ=255)
                                                                  aaGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa                                                            <  2:1384942/139‑1 (MQ=255)
                                                                  aaGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa                                                            <  2:895688/139‑1 (MQ=255)
                                                                        aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGcc                                                      <  1:322224/139‑1 (MQ=255)
                                                                               gCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCtt                                               >  1:1774322/1‑139 (MQ=255)
                                                                                cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc                                              <  2:1738717/139‑1 (MQ=255)
                                                                                   agagAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTcc                                             <  1:1942819/137‑1 (MQ=255)
                                                                                   agagAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTcc                                             >  2:1942819/1‑137 (MQ=255)
                                                                                     agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGAt                                                                                                                  >  1:461421/1‑66 (MQ=255)
                                                                                     agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGAt                                                                                                                  <  2:461421/66‑1 (MQ=255)
                                                                                     agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgac                                                                  >  1:596745/1‑114 (MQ=255)
                                                                                     agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgac                                                                  <  2:596745/114‑1 (MQ=255)
                                                                                          ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata                                    <  2:1307869/139‑1 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt                                                                                    >  1:896874/1‑86 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt                                                                                    <  2:896874/86‑1 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATcc                                                                               <  2:1701361/91‑1 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATcc                                                                               >  1:1701361/1‑91 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               <  2:1710052/139‑1 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               <  2:1632334/139‑1 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               <  2:1774322/139‑1 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               <  1:657907/139‑1 (MQ=255)
                                                                                               atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               <  2:419272/139‑1 (MQ=255)
                                                                                                 atGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATa                                                                                                      <  1:1584835/66‑1 (MQ=255)
                                                                                                 atGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATa                                                                                                      >  2:1584835/1‑66 (MQ=255)
                                                                                                    aaaCGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa                          <  2:1915059/139‑1 (MQ=255)
                                                                                                     aaCGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGAt                                                                                                                  <  2:1974001/50‑1 (MQ=255)
                                                                                                     aaCGCGGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGAt                                                                                                                  >  1:1974001/1‑50 (MQ=255)
                                                                                                       cgcgGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTacac                       >  1:996616/1‑139 (MQ=255)
                                                                                                       cgcgGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa                          >  2:1156867/1‑136 (MQ=255)
                                                                                                       cgcgGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa                          <  1:1156867/136‑1 (MQ=255)
                                                                                                        gcgGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAGCGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACAcc                      <  1:767764/139‑1 (MQ=255)
                                                                                                         cgGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGa                                                                                                                   >  2:939637/1‑45 (MQ=255)
                                                                                                         cgGGCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGa                                                                                                                   <  1:939637/45‑1 (MQ=255)
                                                                                                          gggCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGt                    >  2:1751129/1‑139 (MQ=255)
                                                                                                            gCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata                                    >  2:1058031/1‑121 (MQ=255)
                                                                                                            gCACAGTTATCACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata                                    <  1:1058031/121‑1 (MQ=255)
                                                                                                                      cACCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCca        >  1:1870916/1‑139 (MQ=255)
                                                                                                                       aCCAGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcag       >  2:646158/1‑139 (MQ=255)
                                                                                                                          aGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg                                                                                         >  2:1617238/1‑54 (MQ=255)
                                                                                                                          aGCCCGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg                                                                                         <  1:1617238/54‑1 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc                                  <  2:1300516/107‑1 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc                                  >  1:1300516/1‑107 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               <  1:1997524/110‑1 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               >  2:558167/1‑110 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               <  1:1777684/110‑1 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               >  2:1997524/1‑110 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               <  1:558167/110‑1 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc                               >  2:1777684/1‑110 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGa            >  1:127880/1‑129 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGa            <  2:127880/129‑1 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa  >  1:274514/1‑139 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa  >  1:1674609/1‑139 (MQ=255)
                                                                                                                            cccGCCGAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa  >  1:364413/1‑139 (MQ=255)
                                                                                                                                   |                                                                                                                                    
GGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAAAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTA  >  NC_000913/1696317‑1696580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: