New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	788831 =	0 (0.000)	89 (1.080)	44/206	0.5	94.2%	coding (7/1041 nt) coding (1149/1149 nt)	galM galK	aldose 1‑epimerase, type‑1 mutarotase, galactose mutarotase galactokinase
	?	NC_000913	3742633 =	11 (0.130)					intergenic (‑101/‑100)	yiaJ/yiaK	transcriptional repressor for the yiaKLMNO‑lyxK‑sgbHUE operon/2,3‑diketo‑L‑gulonate reductase, NADH‑dependent

CGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/788955‑788831 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC  >  NC_000913/3742633‑3742765                                                                                                                                                                                                                                                                    CGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTT                                                                                                                         >  1:1293308/1‑139                  CTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATA                                                                                                        >  1:1262206/1‑139                  CTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               >  1:1803899/1‑132                  CTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               <  2:1803899/132‑1                  CTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCT                                                                                                                             >  2:140597/1‑118                  CTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCT                                                                                                                             <  1:140597/118‑1                  CTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACA                                                                                                                                     >  2:1260446/1‑110                  CTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACA                                                                                                                                     <  1:1260446/110‑1                          TGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAAT                                                                                                >  2:734147/1‑139                            CCGTACAGCAAGCTGTCGCTGAACAATATGAGGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               <  1:1425693/122‑1                            CCGTACAGCAAGCTGTCGCTGAACAATATGAGGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               >  2:1425693/1‑122                                           TCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGA                                                                               <  2:1293308/139‑1                                                     ATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTA                                                                        <  2:1122951/136‑1                                                     ATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTA                                                                        >  1:1122951/1‑136                                                           AGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               >  2:274761/1‑91                                                           AGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               <  1:274761/91‑1                                                                AAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCta                                                          >  1:2019376/1‑137                                                                AAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGA                                                          >  2:1059910/1‑139                                                                    AGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAA                                                      <  1:1059910/139‑1                                                                    AGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAA                                                      <  1:1056238/139‑1                                                                         TTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCTATCAAAAAAA                                                 <  2:2019376/139‑1                                                                                GACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               >  2:209319/1‑70                                                                                GACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               <  1:209319/70‑1                                                                                 ACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGA                                                                               <  2:558078/101‑1                                                                                 ACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGA                                                                               >  1:558078/1‑101                                                                                 ACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGT                                                                                                                  <  1:833123/66‑1                                                                                 ACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGT                                                                                                                  >  2:833123/1‑66                                                                                     TTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAG                                         >  1:1991524/1‑135                                                                                     TTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAG                                         <  2:1991524/135‑1                                                                                        ACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGA                                  <  1:1936952/139‑1                                                                                               TAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTCAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGT                           <  2:1262206/139‑1                                                                                               TAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               >  1:291106/1‑55                                                                                               TAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               <  2:291106/55‑1                                                                                               TAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCC                                                                                                                              <  2:1541698/40‑1                                                                                               TAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCC                                                                                                                              >  1:1541698/1‑40                                                                                                    CATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTA                                                                        <  2:1675590/89‑1                                                                                                    CATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTA                                                                        >  1:1675590/1‑89                                                                                                    CATCACAAGGAGCAGGACAGTGCTGACAGATTGCC                                                                                                                              >  2:837114/1‑35                                                                                                    CATCACAAGGAGCAGGACAGTGCTGACAGATTGCC                                                                                                                              <  1:837114/35‑1                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCTAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTT                    >  1:690514/1‑139                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTT                    >  1:1148665/1‑139                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCG                                                                                       >  1:1715533/1‑72                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCG                                                                                       <  2:1715533/72‑1                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               <  1:1541947/48‑1                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               >  2:1745331/1‑48                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               <  1:1745331/48‑1                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               >  2:1541947/1‑48                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTG                                                                                                                 <  1:1259722/46‑1                                                                                                      TCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTG                                                                                                                 >  2:1259722/1‑46                                                                                                       CACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGTGATCAAAAAAACAAGGAAGCCTTGGATGAAAGTGACATTTG                   >  2:174404/1‑139                                                                                                       CACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACAATTG                   >  1:1843731/1‑139                                                                                                         CAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG                 <  2:291583/139‑1                                                                                                             GAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGT             <  1:734147/139‑1                                                                                                              AGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAA                                                      >  2:839004/1‑97                                                                                                              AGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAA                                                      <  1:839004/97‑1                                                                                                               GCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               <  1:1773199/39‑1                                                                                                               GCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGAT                                                                                                               >  2:1773199/1‑39                                                                                                                   GACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCTAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAG       <  2:690514/139‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGGTATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAA                                                                  <  2:1345678/75‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAGATTTTAAGCCAA                                                                  >  1:1345678/1‑75                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC  >  1:1165209/1‑139                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC  >  1:739196/1‑139                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC  >  1:1527924/1‑139                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC  >  2:1792265/1‑139                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC  >  2:1014050/1‑139                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAG       >  2:1984236/1‑134                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAG       <  1:1984236/134‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG                 <  1:1664272/124‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAG                 >  2:1664272/1‑124                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATG                                >  1:622428/1‑109                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATG                                <  2:622428/109‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCC                                       <  1:655800/102‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCC                                       >  2:655800/1‑102                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGC                                        >  1:1557318/1‑101                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGC                                        <  2:1557318/101‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAG                                         >  1:545785/1‑100                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAG                                         <  2:545785/100‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGG                                            >  2:1035328/1‑97                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGG                                            <  1:1035328/97‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAG                                                             >  1:646613/1‑80                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAG                                                             <  2:646613/80‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCA                                                                                     <  1:496323/56‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCA                                                                                     >  2:496323/1‑56                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATC                                                                                               <  2:443581/46‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATC                                                                                               >  1:443581/1‑46                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATCTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGC      <  1:226237/135‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATCTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGC      >  2:226237/1‑135                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATAT                                                                                                       <  1:1380375/38‑1                                                                                                                        TGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATAT                                                                                                       >  2:1380375/1‑38                                                                                                                                                                                                                                                                    CGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/788955‑788831 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC  >  NC_000913/3742633‑3742765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.