| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2225875 | 98 (1.190) | 3 (0.040) | 3/202 | 7.6 | 3.2% | coding (75/579 nt) | yohD | DedA family inner membrane protein |
| ? | NC_000913 | = 2225908 | 84 (1.040) | coding (108/579 nt) | yohD | DedA family inner membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2225836‑2225875‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCTGATGCGCCGCAACGCCTCCCAGCAAAGTCACGGTTTCACCTTCCGCCAGGCTACCGATCACCAGCGCGGCATAACCATATTGTGAGATAAGTGTATTGAGATCCATAGGCCAGTCTGTCTCCCTTTGGTTGCCAGT < NC_000913/2225908‑2225771 TGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCCTGATGCGCCGCAACACCTCCCAGCAAAGTCA > 1:1526940/1‑72TGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCCTGATGCGCCGCAACACCTCCCAGCAAAGTCA < 2:1526940/72‑1 ACCCTGATGCGCCGCAACACCTCCCAGCAAAGTCACGGTTTCACCTTCCGCCAGGCTACCGATCACCAGCGCGGCATAACCATATTGTGAGATAAGTGTATTGAGATCCATAGGCCAGTCTGTCTCCCTTTGGTTGCCA > 1:1285542/1‑139 CCCTGATGCGCCGCAACACCTCCCAGCAAAGTCACGGTTTCACCTTCCGCCAGGCTACCGATCACCAGCGCGGCATAACCATATTGTGAGATAAGTGTATTGAGATCCATAGGCCAGTCTGTCTCCCTTTGGTTGCC < 1:2048508/137‑1 CCCTGATGCGCCGCAACACCTCCCAGCAAAGTCACGGTTTCACCTTCCGCCAGGCTACCGATCACCAGCGCGGCATAACCATATTGTGAGATAAGTGTATTGAGATCCATAGGCCAGTCTGTCTCCCTTTGGTTGCC > 2:2048508/1‑137 CCTGATGCGCCGCAACACCTCCCAGCAAAGTCACGGTTTCACCTTCCGCCAGGCTACCGATCACCAGCGCGGCATAACCATATTGTGAGATAAGTGTATTGAGATCCATAGGCCAGTCTGTCTCCCTTTGGTTGCCAGT > 1:21539/1‑139 CCTGATGCGCCGCAACACCTCCCAGCAAAGTCACGGTTTCACCTTCCGCCAGGCTACCGATCACCAGCGCGGCATAACCATATTGTGAGATAAGTGTATTGAGATCCATAGGCCAGTCTGTCTCCCTTTGGTTGCCAGT > 1:471308/1‑139 TGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2225836‑2225875‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCTGATGCGCCGCAACGCCTCCCAGCAAAGTCACGGTTTCACCTTCCGCCAGGCTACCGATCACCAGCGCGGCATAACCATATTGTGAGATAAGTGTATTGAGATCCATAGGCCAGTCTGTCTCCCTTTGGTTGCCAGT < NC_000913/2225908‑2225771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |