Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 4,075,454 | G→A | *262* (TAG→TAA) | yihW → | putative transcriptional regulator for sulphoquinovose utilization |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,075,454 | 0 | G | A | 100.0% | 254.2 / NA | 77 | *262* (TAG→TAA) | yihW | putative transcriptional regulator for sulphoquinovose utilization |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (38/39); total (38/39) |
ATGCTTCGGCGGCGGTTGAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAGATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGATTTAGGTAATGTGATTG > NC_000913/4075318‑4075586 | aTGCTTCGGCGGCGGTTGAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAAt > 1:13304/1‑139 (MQ=255) cggcggcggTTGAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTtgt < 2:1783849/139‑1 (MQ=255) cggcggcggTTGAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTtgt > 1:165129/1‑139 (MQ=255) gTTGAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGtt < 2:1454936/138‑1 (MQ=255) gTTGAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGtt > 1:1454936/1‑138 (MQ=255) gAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc < 1:492345/139‑1 (MQ=255) ggTAACGTGGCACAGGTCACTGCTCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCtt < 2:13304/139‑1 (MQ=255) tAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCa < 1:1899169/139‑1 (MQ=255) gTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATAcc > 2:1926780/1‑139 (MQ=255) acaGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGcc > 2:1818157/1‑139 (MQ=255) ggTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCcaca < 2:165129/139‑1 (MQ=255) gTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc < 2:930832/118‑1 (MQ=255) gTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc > 1:930832/1‑118 (MQ=255) gTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACAt > 2:1320226/1‑139 (MQ=255) aCTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGc > 2:1451010/1‑139 (MQ=255) gcgcTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCaa > 2:1916500/1‑139 (MQ=255) gcTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAAc < 2:74461/139‑1 (MQ=255) cgaGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCAGGGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTcc < 2:546861/139‑1 (MQ=255) aGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGc > 2:613413/1‑139 (MQ=255) aGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGc > 2:1245042/1‑139 (MQ=255) cTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTtgt < 2:582463/83‑1 (MQ=255) cTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTtgt > 1:582463/1‑83 (MQ=255) cTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTtgt > 1:1773949/1‑83 (MQ=255) cTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTtgt < 2:1773949/83‑1 (MQ=255) aCGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTa < 2:1162048/122‑1 (MQ=255) aCGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTa > 1:1162048/1‑122 (MQ=255) cTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCt < 1:759693/112‑1 (MQ=255) cTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCt > 2:759693/1‑112 (MQ=255) aCAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCaaaa < 1:1916500/139‑1 (MQ=255) cAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc < 1:303938/59‑1 (MQ=255) cAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc > 2:303938/1‑59 (MQ=255) cAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCaaaaa < 1:1926780/139‑1 (MQ=255) gCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc < 2:1659858/57‑1 (MQ=255) gCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc > 1:1659858/1‑57 (MQ=255) gCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc < 2:1348327/57‑1 (MQ=255) gCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc > 1:1348327/1‑57 (MQ=255) gCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAaggagg > 2:150061/1‑131 (MQ=255) gCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAaggagg < 1:150061/131‑1 (MQ=255) gCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATg > 2:217162/1‑139 (MQ=255) ccAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTtgt < 1:1037956/45‑1 (MQ=255) ccAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTtgt > 2:1037956/1‑45 (MQ=255) ccAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc > 1:1382491/1‑56 (MQ=255) ccAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAAcc < 2:1382491/56‑1 (MQ=255) ccAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCaa > 1:1598392/1‑133 (MQ=255) ccAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCaa < 2:1598392/133‑1 (MQ=255) ccAAATTGAAATCATTCTCCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATa < 2:344168/66‑1 (MQ=255) ccAAATTGAAATCATTCTCCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATa > 1:344168/1‑66 (MQ=255) cAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGct > 1:326647/1‑139 (MQ=255) cAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCACGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGct < 1:1451010/139‑1 (MQ=255) aaTCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCt < 1:1818157/139‑1 (MQ=255) aaTCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCt < 1:217162/139‑1 (MQ=255) aTCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCt < 1:1099280/138‑1 (MQ=255) aTCATTCTTCCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCt > 2:1099280/1‑138 (MQ=255) ttcttcCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGAt > 2:1749277/1‑139 (MQ=255) tcttcCCCA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGAtt < 1:613413/139‑1 (MQ=255) ccccA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCa < 1:219113/45‑1 (MQ=255) ccccA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCa > 2:219113/1‑45 (MQ=255) cccA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGATTTAGGt < 1:720463/139‑1 (MQ=255) cA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGc > 1:1275895/1‑58 (MQ=255) cA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGc < 2:1275895/58‑1 (MQ=255) cA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATc < 1:1381446/68‑1 (MQ=255) cA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATc > 2:1381446/1‑68 (MQ=255) cA‑GGAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGATTTAGGTaa > 2:1969043/1‑139 (MQ=255) ggAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCt < 2:62164/124‑1 (MQ=255) ggAAGACGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCt > 1:62164/1‑124 (MQ=255) aCGCGTAAATTTTTGTGACCGTTAACCTGGCTTCa < 1:459148/35‑1 (MQ=255) aCGCGTAAATTTTTGTGACCGTTAACCTGGCTTCa > 2:459148/1‑35 (MQ=255) aCGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTcc < 1:399987/67‑1 (MQ=255) aCGCGTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTcc > 2:399987/1‑67 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCAt > 1:1746782/1‑59 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCAt < 2:1746782/59‑1 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCg < 2:553751/68‑1 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCg > 1:553751/1‑68 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTa > 1:844039/1‑71 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTa < 2:844039/71‑1 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGAtt < 1:1002646/124‑1 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGAtt > 2:1002646/1‑124 (MQ=255) cgcgTAAATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGATTTAGGTAATGTGATTg > 2:1902513/1‑139 (MQ=255) | ATGCTTCGGCGGCGGTTGAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCA‑GGAAGACGCGTAGATTTTTGTGACCGTTAACCTGGCTTCATACCTTGCCACATAGCCAAACCCATCCTTTCCCGCTACAGTTAATTTCTTGTGGCGCGAAAGGAGGCAAAAATGCTCTATATCTTTGATTTAGGTAATGTGATTG > NC_000913/4075318‑4075586 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |