| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,297,077 | C→T | A17T (GCC→ACC) | yjcO ← | Sel1 family TPR‑like repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,297,077 | 0 | C | T | 100.0% | 188.4 / NA | 58 | A17T (GCC→ACC) | yjcO | Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (28/30); total (28/30) | |||||||||||
CAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGTTCGAATGGATAAAAAAACAGCCTCCGAAAGGAGGC > NC_000913/4296956‑4297202 | cAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCa < 1:1826997/139‑1 (MQ=255) tatTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCaaaa > 2:654615/1‑139 (MQ=255) atTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCaaaaa < 1:449227/139‑1 (MQ=255) tGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGaa > 1:2044643/1‑121 (MQ=255) tGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGaa < 2:2044643/121‑1 (MQ=255) tGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCaa > 2:805217/1‑139 (MQ=255) ccGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCaaa < 1:1287843/117‑1 (MQ=255) ccGGAGCTAAACCAGCTCTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCaaa > 2:1287843/1‑117 (MQ=255) cGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGa < 2:1588978/108‑1 (MQ=255) cGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGa > 1:1588978/1‑108 (MQ=255) cGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAAtttt > 2:105021/1‑139 (MQ=255) gCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGata > 2:216054/1‑139 (MQ=255) cTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCGCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa < 2:1435153/139‑1 (MQ=255) gTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataata < 2:754236/139‑1 (MQ=255) gCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGAt < 1:105021/139‑1 (MQ=255) tgCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGa > 2:1280390/1‑135 (MQ=255) tgCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGa < 1:1280390/135‑1 (MQ=255) tgCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTaa < 1:654615/139‑1 (MQ=255) gcgcGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGa > 1:1716789/1‑97 (MQ=255) gcgcGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGa < 2:1716789/97‑1 (MQ=255) cgcgTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAaac > 2:1993981/1‑83 (MQ=255) cgcgTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAaac < 1:1993981/83‑1 (MQ=255) gcgTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCa > 2:184776/1‑139 (MQ=255) cgTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa > 1:1941241/1‑115 (MQ=255) cgTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa < 2:1941241/115‑1 (MQ=255) gTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCaaa > 2:699031/1‑77 (MQ=255) gTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCaaa < 1:699031/77‑1 (MQ=255) gTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAtt > 2:1559774/1‑107 (MQ=255) gTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAtt < 1:1559774/107‑1 (MQ=255) tCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAt > 1:156760/1‑101 (MQ=255) tCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAt < 2:156760/101‑1 (MQ=255) tCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa > 2:1321534/1‑109 (MQ=255) tCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa < 1:1321534/109‑1 (MQ=255) tCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATaaa > 2:1688230/1‑139 (MQ=255) ggCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAtttt < 2:1849615/99‑1 (MQ=255) ggCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAtttt > 1:1849615/1‑99 (MQ=255) ggCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGtt > 1:943157/1‑139 (MQ=255) ctctGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGTTCGa < 2:943157/139‑1 (MQ=255) tgctgcCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCa < 2:1053266/89‑1 (MQ=255) tgctgcCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCa > 1:1053266/1‑89 (MQ=255) tgctgcCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGTTCGAATg > 1:1387143/1‑139 (MQ=255) ccTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAtttt > 2:1706064/1‑88 (MQ=255) ccTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAtttt < 1:1706064/88‑1 (MQ=255) cTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa < 2:150921/92‑1 (MQ=255) cTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa > 1:150921/1‑92 (MQ=255) aCTGGCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGTTCGAATGGATAAAAAAACAGc < 1:1688230/139‑1 (MQ=255) ggCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGa > 2:1278150/1‑36 (MQ=255) ggCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGa < 1:1278150/36‑1 (MQ=255) ggCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCa < 1:1991827/42‑1 (MQ=255) ggCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCa > 2:1991827/1‑42 (MQ=255) ggCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa > 2:113195/1‑81 (MQ=255) ggCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa < 1:113195/81‑1 (MQ=255) gCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAATCAACATCAATGCGATAATTTTTTTCATTTTGataa > 1:1456116/1‑80 (MQ=255) gCTGCCAGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGataa < 2:1456116/80‑1 (MQ=255) aGGCTCGGAGTCGTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGTTCGAATGGATAAAAAAACAGCCTCCGAAagg < 2:255041/139‑1 (MQ=255) tCGGAGTCGTTGGTGTGGGGAAAGAATGTCAAAAACAACATCAATGCGAGAATGTTTTTCATCTTTATAATACGAATGGGTAGGGAGTAATCAGTATAAAGAGTTCGAAAGAATAAAAAAACAGCCACCGAAAGGAGGc < 1:575836/139‑1 (MQ=255) gTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGTTCGaa < 1:1510535/101‑1 (MQ=255) gTTGGTGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGTTCGaa > 2:1510535/1‑101 (MQ=255) | CAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGTAGGGAGTAACCAGTATAAAGAGTTCGAATGGATAAAAAAACAGCCTCCGAAAGGAGGC > NC_000913/4296956‑4297202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |