| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 883,665 | IS1 (–) +9 bp | [mdfA] | [mdfA] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 258675 | NA (NA) | 61 (1.300) | 48/210 | 0.0 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 883665 = | 0 (0.000) | intergenic (‑277/‑8) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux system protein | |||||
| * | ? | NC_000913 | = 883673 | 0 (0.000) | 46 (0.980) | 32/210 | 0.3 | 100% | coding (1/1233 nt) | mdfA | multidrug efflux system protein |
| ? | NC_000913 | = 1050545 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 104 total aligned reads displayed.
AAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAA > NC_000913/883537‑883810 | cggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATtgcatg < 1:207111‑M2/11‑1 (MQ=255) aaaCTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggt < 2:1124517‑M1/139‑4 (MQ=255) aaCTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggta > 1:675009‑M1/1‑135 (MQ=255) cTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaat < 1:700155‑M1/139‑7 (MQ=255) cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCaaaa < 2:646519‑M2/16‑1 (MQ=255) tgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAaaataaa < 2:188521‑M2/20‑1 (MQ=255) agaaagCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactc < 2:13254‑M1/139‑12 (MQ=255) aCTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagt < 2:648552‑M1/139‑27 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATtgcatg > 2:307897‑M2/102‑112 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATtgcatg < 1:307897‑M2/11‑1 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAaaataaa < 2:822410‑M2/20‑1 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAaaataaa > 1:822410‑M2/102‑121 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTc > 2:167684‑M2/102‑129 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTc < 1:167684‑M2/28‑1 (MQ=255) taataaTGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgtttt < 2:30571‑M1/139‑32 (MQ=255) cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCtt > 2:339520‑M2/99‑139 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTg < 2:431495‑M2/42‑1 (MQ=255) atGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgtt < 2:675009‑M1/139‑37 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTc > 2:8803‑M2/95‑122 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTc < 1:8803‑M2/28‑1 (MQ=255) tGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaat > 2:113490‑M1/1‑102 (MQ=255) tGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaat < 1:113490‑M1/108‑7 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTc > 2:72598‑M2/92‑139 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAg > 1:283655‑M2/90‑139 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAgg < 1:339520‑M2/51‑1 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGc < 2:283655‑M2/52‑1 (MQ=255) tgCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactcc < 2:1068319‑M1/104‑13 (MQ=255) tgCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactcc < 1:948783‑M1/104‑13 (MQ=255) tgCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactcc > 2:948783‑M1/1‑92 (MQ=255) tgCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactcc < 2:467893‑M1/104‑13 (MQ=255) tgCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactcc > 1:1068319‑M1/1‑92 (MQ=255) agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTa > 2:484594‑M2/84‑139 (MQ=255) aaCCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg > 1:1064917‑M1/1‑87 (MQ=255) aaCCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgat > 2:442298‑M1/1‑87 (MQ=255) aaCCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgat < 1:442298‑M1/110‑24 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATtgcatgca > 2:452605‑M2/78‑90 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATtgcatgca < 1:452605‑M2/13‑1 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTccc < 1:1131148‑M2/64‑1 (MQ=255) tGGTTTCAGTTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTA‑TGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccg > 1:761465‑M1/1‑81 (MQ=255) tGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTA‑TGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccg < 2:761465‑M1/130‑50 (MQ=255) tagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGc > 1:991860‑M2/72‑105 (MQ=255) gTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgata < 2:58724‑M1/104‑25 (MQ=255) gTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgata > 1:58724‑M1/1‑80 (MQ=255) ttCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 2:887370‑M1/139‑62 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacattaaatcagtcagttggcagcatcaccGAAATtgcatg > 2:1133528‑M2/67‑77 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATtgcatg < 1:1133528‑M2/11‑1 (MQ=255) aagccactggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTg > 2:897334‑M2/63‑139 (MQ=255) cAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc > 1:225852‑M1/1‑70 (MQ=255) ggagcacctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGa < 1:436073‑M2/85‑1 (MQ=255) cctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAAttt < 1:847887‑M2/89‑1 (MQ=255) cctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAAttt > 2:847887‑M2/49‑137 (MQ=255) cctcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTc > 1:307870‑M2/49‑139 (MQ=255) tcaaaaacaccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAACTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCaa < 2:75585‑M2/93‑1 (MQ=255) tGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc > 2:606030‑M1/1‑48 (MQ=255) tGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc > 2:1010693‑M1/1‑48 (MQ=255) cgcTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac < 1:217811‑M1/100‑55 (MQ=255) cgcTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac > 2:217811‑M1/1‑46 (MQ=255) ccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACg < 2:370797‑M2/46‑1 (MQ=255) ccatcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACg > 1:370797‑M2/38‑83 (MQ=255) tcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCa > 1:1068459‑M2/35‑139 (MQ=255) tcatacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCa < 2:307870‑M2/105‑1 (MQ=255) catacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCaa < 2:1068459‑M2/106‑1 (MQ=255) tacattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACg > 2:735911‑M2/32‑139 (MQ=255) acattaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGa < 1:214604‑M2/109‑1 (MQ=255) attaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCtt < 1:890963‑M2/80‑1 (MQ=255) attaaatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCtt > 2:890963‑M2/29‑108 (MQ=255) aatcagtaagttggcagcatcaccGAAATtgcatg < 2:170122‑M2/11‑1 (MQ=255) aatcagtaagttggcagcatcaccGAAATtgcatg > 1:170122‑M2/25‑35 (MQ=255) aatcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGAt > 1:859662‑M2/25‑139 (MQ=255) atcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGat > 1:381144‑M2/24‑133 (MQ=255) atcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGat < 2:381144‑M2/110‑1 (MQ=255) tcagtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTc > 2:861171‑M2/23‑139 (MQ=255) ctGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc > 1:498037‑M1/1‑31 (MQ=255) ctGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc < 2:498037‑M1/137‑107 (MQ=255) tGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt > 2:990788‑M1/1‑30 (MQ=255) tGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt > 1:971910‑M1/1‑30 (MQ=255) tGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga > 2:797033‑M1/1‑30 (MQ=255) tGCGCGATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga < 1:797033‑M1/83‑54 (MQ=255) agtaagttggccgcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCaa < 1:735911‑M2/119‑1 (MQ=255) gtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGAt < 2:78428‑M2/115‑1 (MQ=255) gtaagttggcagcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGAt > 1:78428‑M2/20‑134 (MQ=255) cgcgATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc > 2:569367‑M1/1‑28 (MQ=255) cgcgATTATTATTGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc > 2:541371‑M1/1‑28 (MQ=255) cgcgATTATTATTGGCGAAGAAATTGCAggtaatgactcc < 1:1026297‑M1/40‑13 (MQ=255) cgcgATTATTATTGGCGAAGAAATTGCAggtaatgactcc > 2:1026297‑M1/1‑28 (MQ=255) ttattattGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgtttta > 1:63910‑M1/1‑23 (MQ=255) ttattattGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgtttta < 2:63910‑M1/55‑33 (MQ=255) gcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTc > 1:97036‑M2/9‑56 (MQ=255) gcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTc < 2:97036‑M2/48‑1 (MQ=255) gcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCctct < 2:1088949‑M2/67‑1 (MQ=255) gcatcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCctct > 1:1088949‑M2/9‑75 (MQ=255) tGGCGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct < 1:606030‑M1/139‑124 (MQ=255) atcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGc < 1:72598‑M2/133‑1 (MQ=255) atcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGc < 1:861171‑M2/133‑1 (MQ=255) tcaccGAAATTGCATGCAAAATAAATTAGCTTCCGGTACCAGGCTTGGACGGCAGGCGAAAGTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCGACCTATATAGGCAACGATATGATTCAACCCGGTATGTTGGcc > 2:187802‑M2/6‑139 (MQ=255) cGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccg < 1:672814‑M1/62‑50 (MQ=255) cGAAGAAATTGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccg > 2:672814‑M1/1‑13 (MQ=255) cGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTgg < 1:897334‑M2/138‑1 (MQ=255) aaTTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGTTTTACTTTTTTTAAACGTATACCGCATACGATATGATTCAACCCGGTATGTTGGCCGtggtgg < 1:187802/139‑1 (MQ=255) cAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttat < 1:1052217‑M1/139‑138 (MQ=255) | AAAACTTAAAGAAAGCGTAGCTATACTCGTAATAATGTAAGAATGTGCTTAACCGTGGTTTCAGCTACAAAATTCGCTTTCTCGTTAGCTGCGCTTTTATTAAACTCTGCGCGATTATTATTGGCGAAGAAATTGCATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAA > NC_000913/883537‑883810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |