| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,263,255 | A→G | R82R (CGT→CGC) | lolB ← | lipoprotein localization factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,263,255 | 0 | A | G | 100.0% | 110.8 / NA | 32 | R82R (CGT→CGC) | lolB | lipoprotein localization factor |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (16/16); total (16/16) | |||||||||||
GGTCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGACGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGATACTGATTAAGATTGCGCACGTCTTGCTGAT > NC_000913/1263123‑1263376 | ggTCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAg > 2:1025266/1‑139 (MQ=255)ggTCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAg > 1:463981/1‑139 (MQ=255) cATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTtgctg < 2:1021730/130‑1 (MQ=255) cATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTtgctg > 1:1021730/1‑130 (MQ=255) aTCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAg < 2:463981/139‑1 (MQ=255) gTATAACGCTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGt < 1:1020067/139‑1 (MQ=255) cTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACtttt > 1:1023091/1‑139 (MQ=255) tATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAg < 1:57912/86‑1 (MQ=255) tATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAg > 2:57912/1‑86 (MQ=255) gACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTttg > 1:1004334/1‑126 (MQ=255) gACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTttg < 2:1004334/126‑1 (MQ=255) cccGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGcgccgc < 1:1021003/139‑1 (MQ=255) cGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGa < 1:1025266/139‑1 (MQ=255) aGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGa < 1:249830/139‑1 (MQ=255) aGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGa > 2:249830/1‑139 (MQ=255) aGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGa < 2:1023091/139‑1 (MQ=255) cATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGaa < 1:79445/121‑1 (MQ=255) cATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGaa > 2:79445/1‑121 (MQ=255) cATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAG‑AGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCCCCGCGAGTCTGATAc > 2:518665/1‑139 (MQ=255) aGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTc < 1:100523/129‑1 (MQ=255) aGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTc > 2:100523/1‑129 (MQ=255) gTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAg > 1:889253/1‑36 (MQ=255) gTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAg < 2:889253/36‑1 (MQ=255) gTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAg > 2:1079558/1‑66 (MQ=255) gTGCTGCCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAg < 1:1079558/66‑1 (MQ=255) tgctgcCCAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGATACTGATTAAGATTGCGCAc > 2:366047/1‑139 (MQ=255) cccAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGt < 1:943333/82‑1 (MQ=255) cccAATGGGTTAGTGAGCAGCAGGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGt > 2:943333/1‑82 (MQ=255) cagcagGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGATACTGATTAAGATTGCGCACGTCTtgctgat < 2:344119/128‑1 (MQ=255) cagcagGCGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGATACTGATTAAGATTGCGCACGTCTtgctgat > 1:344119/1‑128 (MQ=255) gcagGCGGTAGCGATCCTGGCCGGGTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGACATATAAGCg < 1:767344/77‑1 (MQ=255) gcagGCGGTAGCGATCCTGGCCGGATTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCg > 2:767344/1‑77 (MQ=255) | GGTCAATTTGCCAATCATCTCTTCGGCGTCATCGGCGGTATAACGCTGACCTTTATTGTCGACTAACTGCACGTTACCCGGTTGAGCATTCAGCTCCAGTTCCGTGCTGCCCAATGGGTTAGTGAGCAGCAGACGGTAGCGATCCTGGCCGGTTTGCTGCCAGAAAAAGCGGGCGTACACTTTTTGTTGGTCAGAAATATAAGCGAACGCGCCGCGAGTCTGATACTGATTAAGATTGCGCACGTCTTGCTGAT > NC_000913/1263123‑1263376 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |