| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,585,322 | C→T | T480T (ACG→ACA) | hsdR ← | endonuclease R Type I restriction enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,585,322 | 0 | C | T | 100.0% | 90.0 / NA | 29 | T480T (ACG→ACA) | hsdR | endonuclease R Type I restriction enzyme |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (14/15); total (14/15) | |||||||||||
GTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCA > NC_000913/4585202‑4585443 | gTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTtaccggta < 2:297375/139‑1 (MQ=255) aaTACGCGTATCTTCAAACGCGCCCAGCGCCTGTTAGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTtaccggtaccg > 2:986383/1‑139 (MQ=255) cgcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGAt > 1:451716/1‑139 (MQ=255) gcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGAtc < 1:806611/139‑1 (MQ=255) cccAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCcagc < 2:887885/132‑1 (MQ=255) cccAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCcagc > 1:887885/1‑132 (MQ=255) agagAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGa < 1:986383/139‑1 (MQ=255) cggcggTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGAtc < 1:249723/114‑1 (MQ=255) cggcggTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGAtc > 2:249723/1‑114 (MQ=255) aaGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGa < 1:511757/139‑1 (MQ=255) gaATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGc < 1:881586/139‑1 (MQ=255) aaTGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCa > 2:488883/1‑139 (MQ=255) tGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATc < 1:488883/139‑1 (MQ=255) gCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCa < 1:458070/136‑1 (MQ=255) gCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCa > 2:458070/1‑136 (MQ=255) gCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCt > 2:178829/1‑139 (MQ=255) cGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttg < 1:914575/95‑1 (MQ=255) cGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttg > 2:914575/1‑95 (MQ=255) gTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTa < 1:905775/50‑1 (MQ=255) gTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTa > 2:905775/1‑50 (MQ=255) gTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTc > 2:427468/1‑139 (MQ=255) cTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAgg < 2:337440/139‑1 (MQ=255) ggCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCcagca < 1:94678/60‑1 (MQ=255) ggCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCcagca > 2:94678/1‑60 (MQ=255) ggCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttgtt < 2:669434/72‑1 (MQ=255) ggCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttgtt > 1:669434/1‑72 (MQ=255) ggCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctc > 1:436826/1‑139 (MQ=255) ggAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcgct < 1:427468/139‑1 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCCCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCa > 2:494742/1‑139 (MQ=255) | GTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCA > NC_000913/4585202‑4585443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |