| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 788831 = | 0 (0.000) | 47 (0.730) | 28/202 | 1.2 | 95.9% | coding (7/1041 nt) coding (1149/1149 nt) |
galM galK |
aldose 1‑epimerase, type‑1 mutarotase, galactose mutarotase galactokinase |
| ? | NC_000913 | 3742633 = | 4 (0.060) | intergenic (‑101/‑100) | yiaJ/yiaK | transcriptional repressor for the yiaKLMNO‑lyxK‑sgbHUE operon/2,3‑diketo‑L‑gulonate reductase, NADH‑dependent | |||||
CATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC > NC_000913/3742494‑3742765 | cATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatc < 1:193085/139‑1 (MQ=255) cGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgtt < 2:451610/139‑6 (MQ=255) ggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt < 2:447607‑M2/24‑1 (MQ=255) ctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGa > 2:239244‑M2/109‑112 (MQ=255) ctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGa < 1:239244‑M2/4‑1 (MQ=255) aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgttg < 2:625968/108‑7 (MQ=255) aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgttg > 1:625968/1‑102 (MQ=255) agctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTg > 2:1621858‑M2/89‑123 (MQ=255) agctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTg < 1:1621858‑M2/35‑1 (MQ=255) tgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc > 1:643666‑M2/86‑94 (MQ=255) tgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc < 2:643666‑M2/9‑1 (MQ=255) agcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCaaaaa > 2:1148554‑M2/68‑139 (MQ=255) aaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc > 1:692147‑M2/63‑102 (MQ=255) aaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc < 2:692147‑M2/40‑1 (MQ=255) aaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTa < 1:181343‑M2/63‑1 (MQ=255) aaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTa > 2:181343‑M2/63‑125 (MQ=255) agagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg < 1:1148554‑M2/90‑1 (MQ=255) actttttacgtttgtaaatcatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg > 2:938820‑M2/46‑135 (MQ=255) actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTaaaaa > 1:692240‑M2/46‑64 (MQ=255) actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTaaaaa < 2:692240‑M2/19‑1 (MQ=255) actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTa > 1:1323846‑M2/46‑108 (MQ=255) actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTa < 2:1323846‑M2/63‑1 (MQ=255) actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg < 1:938820‑M2/90‑1 (MQ=255) actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAg > 2:474378‑M2/46‑139 (MQ=255) tgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGaaa > 2:137898‑M2/34‑139 (MQ=255) catcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGa < 2:714844‑M2/92‑1 (MQ=255) catcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGa > 1:714844‑M2/27‑118 (MQ=255) catcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc < 1:1523077‑M2/96‑1 (MQ=255) catcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc > 2:1523077‑M2/27‑122 (MQ=255) tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt > 1:1451691‑M2/25‑48 (MQ=255) tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt > 1:1356844‑M2/25‑48 (MQ=255) tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt < 2:1356844‑M2/24‑1 (MQ=255) tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt < 2:1451691‑M2/24‑1 (MQ=255) cacaaggagcaggacagtgctgaCAGATTGCCTTGtt > 1:969426‑M2/24‑37 (MQ=255) cacaaggagcaggacagtgatgaCAGATTGCCTTGtt < 2:969426‑M2/14‑1 (MQ=255) caggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTATGCCAAAAAAGTGATCAAAAAAACAAGCAAGGCTGGTATGAAAGTGACATTTGAGCAGTTaa > 2:1076184‑M2/15‑139 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc > 2:549145‑M2/7‑46 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc < 1:549145‑M2/40‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTg < 2:1165749‑M2/55‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTg > 1:1165749‑M2/7‑61 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCa > 2:1211627‑M2/7‑74 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCa < 1:1211627‑M2/68‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa < 2:1649213‑M2/81‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa < 2:611457‑M2/81‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa > 1:611457‑M2/7‑87 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa > 1:1649213‑M2/7‑87 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGt < 2:116765‑M2/108‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGt > 1:116765‑M2/7‑114 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAg > 1:917054‑M2/7‑124 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAg < 2:917054‑M2/118‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc > 1:927695‑M2/7‑139 (MQ=255) | CATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCC > NC_000913/3742494‑3742765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |