| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 69,623 | G→C | D142E (GAC→GAG) | araB ← | L‑ribulokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 69,623 | 0 | G | C | 100.0% | 169.9 / NA | 48 | D142E (GAC→GAG) | araB | L‑ribulokinase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (24/24); total (24/24) | |||||||||||
CAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCA > NC_000913/69488‑69747 | cAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCa > 2:1509202/1‑139 (MQ=255) gCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACaa < 1:817114/139‑1 (MQ=255) gCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACaa < 1:1509202/139‑1 (MQ=255) aTCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACggg > 1:813768/1‑139 (MQ=255) gCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATctct > 2:1576296/1‑138 (MQ=255) gCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATctct < 1:1576296/138‑1 (MQ=255) gCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCtt > 1:245770/1‑139 (MQ=255) gCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCg < 2:245770/139‑1 (MQ=255) aTTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGcttc > 1:247048/1‑139 (MQ=255) ccACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAAc < 1:1439347/139‑1 (MQ=255) cTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAgtgt < 2:1612547/139‑1 (MQ=255) aGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCcac < 2:813768/139‑1 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCgg < 1:3877/79‑1 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCgg > 2:3877/1‑79 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGca < 1:1630536/88‑1 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGca < 1:17200/88‑1 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGca > 2:1630536/1‑88 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGca > 2:17200/1‑88 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTa < 1:530339/98‑1 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTa > 2:530339/1‑98 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCcac > 1:1453218/1‑137 (MQ=255) tCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCcac < 2:1453218/137‑1 (MQ=255) ttGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGtt > 2:1620918/1‑139 (MQ=255) cAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGt < 2:247048/139‑1 (MQ=255) aaCCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCa < 1:906524/45‑1 (MQ=255) aaCCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCa > 2:906524/1‑45 (MQ=255) ttCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCg < 2:1262667/92‑1 (MQ=255) ttCGCTGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCg > 1:1262667/1‑92 (MQ=255) tGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCt < 1:778107/98‑1 (MQ=255) tGGAATAAATACCACCAATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCt > 2:778107/1‑98 (MQ=255) caccaATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAgcgc > 2:1161051/1‑139 (MQ=255) ccaATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGcaca < 2:79795/43‑1 (MQ=255) ccaATGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGcaca > 1:79795/1‑43 (MQ=255) aTGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAAc > 2:55125/1‑68 (MQ=255) aTGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAAc < 1:55125/68‑1 (MQ=255) aTGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTcc < 1:999482/85‑1 (MQ=255) aTGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCa > 1:1117517/1‑139 (MQ=255) aTGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTATcc > 2:999482/1‑85 (MQ=255) tGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAgtgt > 1:89286/1‑75 (MQ=255) tGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAgtgt < 2:89286/75‑1 (MQ=255) tGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCt > 1:626273/1‑80 (MQ=255) tGTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCt < 2:626273/80‑1 (MQ=255) gTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCaa > 2:21794/1‑65 (MQ=255) gTAGCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCaa < 1:21794/65‑1 (MQ=255) gCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGct < 2:284533/55‑1 (MQ=255) gCGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGct > 1:284533/1‑55 (MQ=255) cGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGgcg > 1:1539151/1‑122 (MQ=255) cGGGAGTACTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGgcg < 2:1539151/122‑1 (MQ=255) agtactCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTc > 2:1279368/1‑95 (MQ=255) agtactCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTc < 1:1279368/95‑1 (MQ=255) | CAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCA > NC_000913/69488‑69747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |