Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,208,517 C→T P129L (CCT→CTT) 
*201* (TAG→TAA
tfaP →
tfaE ←
e14 prophage, uncharacterized protein
e14 prophage, putative tail fiber assembly protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,208,5170CT100.0% 227.8 / NA 77P129L (CCT→CTT) 
*201* (TAG→TAA
tfaP
tfaE
e14 prophage, uncharacterized protein
e14 prophage, putative tail fiber assembly protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (38/39);  total (38/39)

ACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCT  >  NC_000913/1208389‑1208647
                                                                                                                                  |                                                                                                                                  
aCAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCg                                                                                                                          >  1:338729/1‑139 (MQ=255)
  aGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGc                                                                                                                        >  1:1264358/1‑139 (MQ=255)
  aGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGc                                                                                                                        >  1:83699/1‑139 (MQ=255)
      gCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGtt                                                                                                                    >  2:1394288/1‑139 (MQ=255)
       cAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGtta                                                                                                                   >  1:1393657/1‑138 (MQ=255)
        aGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGttag                                                                                                                  <  1:308242/139‑3 (MQ=255)
            tAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCa                                                                                                             >  1:1420914/1‑139 (MQ=255)
              aGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGa                                                                                                           >  2:22497/1‑139 (MQ=255)
                    cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGttaggc                                                                                                                <  2:1609552/131‑5 (MQ=25)
                    cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGttaggc                                                                                                                >  1:1609552/1‑127 (MQ=25)
                          gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               <  2:1264358/139‑1 (MQ=255)
                              aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGt                                                                                                                     >  2:1432815/1‑114 (MQ=255)
                              aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGt                                                                                                                     <  1:1432815/114‑1 (MQ=255)
                              aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               <  2:1621468/135‑1 (MQ=255)
                              aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               >  1:1621468/1‑135 (MQ=255)
                              aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGt                                                                                           <  1:1274829/139‑1 (MQ=255)
                              aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGt                                                                                           <  2:338729/139‑1 (MQ=255)
                                              cTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               <  2:1008981/119‑1 (MQ=255)
                                              cTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               >  1:1008981/1‑119 (MQ=255)
                                                   aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc                                                                      <  2:83699/139‑1 (MQ=255)
                                                      atatAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCACCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGa                                                                                                           <  1:988455/99‑1 (MQ=17)
                                                      atatAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCACCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGa                                                                                                           >  2:988455/1‑99 (MQ=17)
                                                             ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg                                                            <  2:1420914/139‑1 (MQ=255)
                                                              tgtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               >  1:240215/1‑103 (MQ=255)
                                                              tgtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               <  2:240215/103‑1 (MQ=255)
                                                               gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCg                                                                                                                          <  1:1553556/76‑1 (MQ=255)
                                                               gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCg                                                                                                                          >  2:1553556/1‑76 (MQ=255)
                                                                tgGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTaa                                                         <  1:22497/139‑1 (MQ=255)
                                                                 ggCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGttaggc                                                                                                                >  2:755044/1‑80 (MQ=255)
                                                                 ggCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGttaggc                                                                                                                <  1:755044/84‑5 (MQ=255)
                                                                  gCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGtta                                                                                                                   >  1:632197/1‑79 (MQ=255)
                                                                  gCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGtta                                                                                                                   <  2:632197/80‑2 (MQ=255)
                                                                       aTTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca                                                  <  2:1393657/139‑1 (MQ=255)
                                                                                aaGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTg                                                                                          >  1:53096/1‑90 (MQ=17)
                                                                                aaGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTg                                                                                          <  2:53096/90‑1 (MQ=17)
                                                                                aaGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa                                         >  1:1596258/1‑139 (MQ=255)
                                                                                aaGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa                                         >  1:1199239/1‑139 (MQ=255)
                                                                                 aGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcgc                                                                                              >  2:815188/1‑85 (MQ=255)
                                                                                 aGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcgc                                                                                              <  1:815188/85‑1 (MQ=17)
                                                                                    aCTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCt                                     <  2:1199239/139‑1 (MQ=255)
                                                                                     cTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTa                                                                                                                                  <  1:539385/46‑1 (MQ=255)
                                                                                     cTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg                                    >  2:337065/1‑139 (MQ=255)
                                                                                     cTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg                                    >  1:34554/1‑139 (MQ=255)
                                                                                        gAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               <  1:1251705/77‑1 (MQ=17)
                                                                                        gAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               >  2:1251705/1‑77 (MQ=17)
                                                                                              gTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGt                                                                                     <  2:294927/81‑1 (MQ=14)
                                                                                              gTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGt                                                                                     >  1:294927/1‑81 (MQ=14)
                                                                                              gTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg                                                                  >  1:592526/1‑100 (MQ=255)
                                                                                              gTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg                                                                  <  2:592526/100‑1 (MQ=255)
                                                                                                tGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTg                                                                                       >  2:1590403/1‑77 (MQ=14)
                                                                                                tGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTg                                                                                       <  1:1590403/77‑1 (MQ=14)
                                                                                                 gAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcc                        <  1:273558/139‑1 (MQ=255)
                                                                                                  aT‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcct                       >  1:1289821/1‑139 (MQ=255)
                                                                                                   t‑‑ACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGGAGTTAGGCCGGATGACATCCGGCGCGGTGCTGGTATCTGTTGcc                                                                           >  2:1042360/1‑86 (MQ=14)
                                                                                                   t‑‑ACATCCAATGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGcc                                                                           <  1:1042360/86‑1 (MQ=14)
                                                                                                      aCATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcctgc                     <  1:1394288/139‑1 (MQ=255)
                                                                                                        aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                   <  2:34554/139‑1 (MQ=255)
                                                                                                        aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                   <  2:1289821/139‑1 (MQ=255)
                                                                                                        aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                   >  2:311326/1‑139 (MQ=255)
                                                                                                        aTCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                   <  1:311326/139‑1 (MQ=255)
                                                                                                          ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGt                                                                               >  2:655905/1‑77 (MQ=11)
                                                                                                          ccAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGt                                                                               <  1:655905/77‑1 (MQ=11)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGAt                                                                                                          >  1:651175/1‑46 (MQ=14)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGAt                                                                                                          <  2:651175/46‑1 (MQ=14)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               <  1:102277/57‑1 (MQ=11)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGgcg                                                                                               >  2:102277/1‑57 (MQ=11)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc                                                                      >  2:1272082/1‑82 (MQ=11)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc                                                                      <  1:1272082/82‑1 (MQ=255)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                   <  2:367398/133‑1 (MQ=255)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt                   >  1:367398/1‑133 (MQ=255)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt             >  2:358061/1‑139 (MQ=255)
                                                                                                              tGCGCCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGCCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt             >  2:1637558/1‑139 (MQ=255)
                                                                                                                cgcCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCg                    <  1:990101/130‑1 (MQ=255)
                                                                                                                cgcCAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCg                    >  2:990101/1‑130 (MQ=255)
                                                                                                                  ccAGATATTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGt         >  1:1687268/1‑139 (MQ=255)
                                                                                                                        atTGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGCCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGcc   <  1:1637558/139‑1 (MQ=255)
                                                                                                                         ttGAATGGCTTACGCCTCCGGCAGTTAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCt  <  1:337065/139‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                  
ACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGAT‑‑ACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCT  >  NC_000913/1208389‑1208647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: