Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,691,192	G→A	Q447Q (CAG→CAA)	ydgA →	DUF945 family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,691,192	0	G	A	100.0%	283.6 / NA	86	Q447Q (CAG→CAA)	ydgA	DUF945 family protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (41/45);  total (41/45)

CTGACCATTCCGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAGATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGC  >  NC_000913/1691067‑1691316                                                                                                                               |                                                                                                                             cTGACCATTCCGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGa                                                                                                                 <  1:575567/139‑1 (MQ=255)    aCCATTCCGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGacca                                                                                                              <  2:1556308/139‑1 (MQ=255)      cATTCCGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCt                                                                                                                   <  1:521310/132‑1 (MQ=255)      cATTCCGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATAAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCt                                                                                                                   >  2:521310/1‑132 (MQ=255)          ccGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGc                                                                                                        <  1:530266/139‑1 (MQ=255)                   atGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATa                                                                                               >  2:488702/1‑139 (MQ=255)                     ggCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAAt                                                                                                <  2:716815/136‑1 (MQ=255)                     ggCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAAt                                                                                                >  1:716815/1‑136 (MQ=255)                     ggCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATAcc                                                                                             <  1:488702/139‑1 (MQ=255)                     ggCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATAcc                                                                                             >  1:1111141/1‑139 (MQ=255)                       cAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCa                                                                                                       <  1:272024/127‑1 (MQ=255)                       cAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCa                                                                                                       >  2:272024/1‑127 (MQ=255)                       cAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGa                                                                                                    >  2:994807/1‑130 (MQ=255)                       cAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGa                                                                                                    <  1:994807/130‑1 (MQ=255)                       cAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCAt                                                                                           <  1:533714/139‑1 (MQ=255)                          cTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGacca                                                                                                              <  2:1281907/117‑1 (MQ=255)                          cTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGacca                                                                                                              >  2:919585/1‑117 (MQ=255)                          cTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGacca                                                                                                              <  1:919585/117‑1 (MQ=255)                          cTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGacca                                                                                                              >  1:1281907/1‑117 (MQ=255)                            gAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATcacca                                                                                      <  2:1044103/139‑1 (MQ=255)                                ttATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAg                                                                                  >  1:1682516/1‑139 (MQ=255)                                  aTGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGcc                                                                                <  2:1471551/139‑1 (MQ=255)                                         aGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGa                                                                                                                 >  1:1482997/1‑99 (MQ=255)                                         aGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGa                                                                                                                 <  2:1482997/99‑1 (MQ=255)                                         aGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAata                                                                         >  1:1044383/1‑139 (MQ=255)                                           gTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGt                                                                                                                          >  2:1097820/1‑88 (MQ=255)                                           gTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGt                                                                                                                          <  1:1097820/88‑1 (MQ=255)                                           gTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATg                                                                       >  1:1100939/1‑139 (MQ=255)                                             aGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCt                                                                     <  1:1012602/139‑1 (MQ=255)                                               cGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTaa                                                                   >  1:1583891/1‑139 (MQ=255)                                                 aaGCTGGAAGGTTATCAGGAAGATGAAGCGAAAAAACTGGTGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACa                                                                                                  >  1:1032492/1‑106 (MQ=255)                                                 aaGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTc                                                                                                                        >  2:240373/1‑84 (MQ=255)                                                 aaGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTc                                                                                                                        <  1:240373/84‑1 (MQ=255)                                                 aaGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACa                                                                                                  <  2:1032492/106‑1 (MQ=255)                                                   gCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGt                                                               <  2:1682516/139‑1 (MQ=255)                                                    cTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTc                                                              >  1:293779/1‑139 (MQ=255)                                                     tGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCa                                                             >  1:279830/1‑139 (MQ=255)                                                      ggAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAg                                                            >  2:531468/1‑139 (MQ=255)                                                       gAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCCAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGa                                                           <  2:1100939/139‑1 (MQ=255)                                                       gAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGa                                                           <  2:1583891/139‑1 (MQ=255)                                                        aaGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGAt                                                          <  1:494173/139‑1 (MQ=255)                                                              aTCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGtt                                                    >  2:384924/1‑139 (MQ=255)                                                              aTCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GAGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGtt                                                    >  1:1020085/1‑139 (MQ=255)                                                                  ggAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGc                                                                                 <  2:1193185/106‑1 (MQ=255)                                                                  ggAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGc                                                                                 >  1:1193185/1‑106 (MQ=255)                                                                     aGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAATGGGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATgg                                              >  2:1130532/1‑139 (MQ=255)                                                                     aGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GAGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATggg                                             <  2:1020085/139‑1 (MQ=255)                                                                      gATCTAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGc                                                                                 <  2:1013090/102‑1 (MQ=255)                                                                      gATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGc                                                                                 >  1:1013090/1‑102 (MQ=255)                                                                      gATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACgg                                                                >  1:651573/1‑119 (MQ=255)                                                                      gATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACgg                                                                <  2:651573/119‑1 (MQ=255)                                                                         cAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGa                                         >  1:1456150/1‑139 (MQ=255)                                                                          aaGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCAt                                                                                           <  2:1450654/88‑1 (MQ=255)                                                                          aaGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCAt                                                                                           >  1:1450654/1‑88 (MQ=255)                                                                           aGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGt                                                                                                                          >  2:467421/1‑56 (MQ=255)                                                                           aGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGt                                                                                                                          <  1:467421/56‑1 (MQ=255)                                                                           aGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGa                                                                                                    <  1:1297825/78‑1 (MQ=255)                                                                           aGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGa                                                                                                    >  2:1297825/1‑78 (MQ=255)                                                                           aGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAg                                                                                  >  2:1247229/1‑96 (MQ=255)                                                                           aGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAg                                                                                  <  1:1247229/96‑1 (MQ=255)                                                                             cGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGa                                                                                                    <  2:1607599/76‑1 (MQ=255)                                                                             cGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGa                                                                                                    >  1:1607599/1‑76 (MQ=255)                                                                             cGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTaa                                                  >  1:20838/1‑126 (MQ=255)                                                                             cGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTaa                                                  <  2:20838/126‑1 (MQ=255)                                                                              gAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATg                                    >  1:1469344/1‑139 (MQ=255)                                                                                 aaaaCTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGt                                                               >  2:603497/1‑109 (MQ=255)                                                                                 aaaaCTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGt                                                               <  1:603497/109‑1 (MQ=255)                                                                                 aaaaCTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCg                                 >  1:334785/1‑139 (MQ=255)                                                                                     cTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTag                             <  2:1469344/139‑1 (MQ=255)                                                                                       ggCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGac                                                                                                                <  2:150976/54‑1 (MQ=255)                                                                                       ggCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGac                                                                                                                >  1:150976/1‑54 (MQ=255)                                                                                         cGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTagaaga                         <  1:384924/139‑1 (MQ=255)                                                                                             aCAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATcacca                                                                                      <  2:1373884/74‑1 (MQ=255)                                                                                             aCAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATcacca                                                                                      >  1:1373884/1‑74 (MQ=255)                                                                                                  aaGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGc                                                                             >  1:478383/1‑78 (MQ=255)                                                                                                  aaGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGc                                                                             <  2:478383/78‑1 (MQ=255)                                                                                                  aaGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTgg                <  2:293779/139‑1 (MQ=255)                                                                                                  aaGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTgg                <  1:531468/139‑1 (MQ=255)                                                                                                   aGTTGAAGGTGCATCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTGGc               <  2:1456150/139‑1 (MQ=255)                                                                                                                tCAGCAAT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGc  <  2:279830/139‑1 (MQ=255)                                                                                                                      aT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACgg                                                                >  1:1177969/1‑71 (MQ=255)                                                                                                                      aT‑GGGGCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACgg                                                                <  2:1177969/71‑1 (MQ=255)                                                                                                                         ggggCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTg        >  2:1676608/1‑125 (MQ=255)                                                                                                                         ggggCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTg        <  1:1676608/125‑1 (MQ=255)                                                                                                                          gggCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCaa                                                                           >  2:868947/1‑57 (MQ=255)                                                                                                                          gggCAAATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCaa                                                                           <  1:868947/57‑1 (MQ=255)                                                                                                                               |                                                                                                                             CTGACCATTCCGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAAT‑GGGGCAGATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGC  >  NC_000913/1691067‑1691316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑