Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,442,007 T→C E57G (GAG→GGG)  msrA ← methionine sulfoxide reductase A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,442,0070TC100.0% 298.9 / NA 82E57G (GAG→GGG) msrAmethionine sulfoxide reductase A
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/43);  total (39/43)

TCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC  >  NC_000913/4441872‑4442140
                                                                                                                                       |                                                                                                                                     
tCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCca                                                                                                                                    <  2:1238016/139‑1 (MQ=255)
tCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCca                                                                                                                                    <  2:238965/139‑1 (MQ=255)
tCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCca                                                                                                                                    <  2:443897/139‑1 (MQ=255)
          tGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGaa                                                                                                                          >  1:869651/1‑139 (MQ=255)
          tGCGTACCGCTTCGGCATCACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGaa                                                                                                                          >  2:941377/1‑139 (MQ=255)
            cGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACAcccc                                                                                                                              >  2:408413/1‑133 (MQ=255)
            cGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACAcccc                                                                                                                              <  1:408413/133‑1 (MQ=255)
               aCCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAaacaac                                                                                                                     >  2:338678/1‑139 (MQ=255)
                     tCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCg                                                                                                               >  1:952706/1‑139 (MQ=255)
                      cGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGc                                                                                                              >  2:1626638/1‑139 (MQ=255)
                              cccGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATgg                                                                                                      >  1:1200005/1‑139 (MQ=255)
                               ccGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGc                                                                                                     <  2:952706/139‑1 (MQ=255)
                               ccGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGc                                                                                                     <  2:1049935/139‑1 (MQ=255)
                                  tATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAAt                                                                                                  >  1:175314/1‑139 (MQ=255)
                                       ccGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCa                                                                                             <  2:869651/139‑1 (MQ=255)
                                        cGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCAt                                                                                            >  1:1269135/1‑139 (MQ=255)
                                        cGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCAt                                                                                            >  1:65827/1‑139 (MQ=255)
                                          gAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCca                                                                                                                                    >  1:1283153/1‑97 (MQ=255)
                                          gAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCca                                                                                                                                    <  2:1283153/97‑1 (MQ=255)
                                             cacaCTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGt                                                                                       >  2:1545917/1‑139 (MQ=255)
                                             cacaCTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGt                                                                                       <  1:1349600/139‑1 (MQ=255)
                                             cacaCTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGt                                                                                       <  1:1545917/139‑1 (MQ=255)
                                                  ttCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGt                                                                                  >  1:919915/1‑139 (MQ=255)
                                                      cGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACAt                                                                              <  2:175314/139‑1 (MQ=255)
                                                          aaGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACATCCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGt                                                                          <  2:1200005/139‑1 (MQ=255)
                                                          aaGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGt                                                                          <  2:1299060/139‑1 (MQ=255)
                                                            gTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGTGGTGCAGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATAGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCa                                                                        >  1:1131628/1‑139 (MQ=255)
                                                            gTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCa                                                                        >  2:1533631/1‑139 (MQ=255)
                                                            gTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCa                                                                        >  1:32010/1‑139 (MQ=255)
                                                            gTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGCCa                                                                        >  1:763580/1‑139 (MQ=255)
                                                              cGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCAtt                                                                      >  1:229177/1‑139 (MQ=255)
                                                              cGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGAGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACAcccc                                                                                                                              <  1:1684638/83‑1 (MQ=255)
                                                              cGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGAGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACAcccc                                                                                                                              >  2:1684638/1‑83 (MQ=255)
                                                               ggATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTg                                                                     >  1:201493/1‑139 (MQ=255)
                                                                 aTTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAg                                                                   <  2:1131628/139‑1 (MQ=255)
                                                                      gCGTATAGCCGCCGGTGTAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGAcc                                                              >  1:1454777/1‑139 (MQ=255)
                                                                           taGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTcc                                                                                         >  1:249275/1‑107 (MQ=255)
                                                                           taGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTcc                                                                                         <  2:249275/107‑1 (MQ=255)
                                                                           taGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGa                                                         <  2:65827/139‑1 (MQ=255)
                                                                            aGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGAc                                                        <  1:1533631/139‑1 (MQ=255)
                                                                            aGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGAc                                                        <  1:1626638/139‑1 (MQ=255)
                                                                                gccgGTGTAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCa                                                    <  2:1454777/139‑1 (MQ=255)
                                                                                gccgGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGc                                                                                                     <  1:692297/90‑1 (MQ=255)
                                                                                gccgGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGc                                                                                                     >  2:692297/1‑90 (MQ=255)
                                                                                gccgGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCa                                                    <  2:567837/139‑1 (MQ=255)
                                                                                  cgGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATg                                                  <  2:1269135/139‑1 (MQ=255)
                                                                                      ataGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGCCATTGAGTGACCGTTGACCGCATGCAGc                                              <  2:763580/139‑1 (MQ=255)
                                                                                              cggcggTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAAcc                                                                                                                    <  2:1072997/61‑1 (MQ=255)
                                                                                              cggcggTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAAcc                                                                                                                    >  1:1072997/1‑61 (MQ=255)
                                                                                               ggcggTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGt                                                                          <  1:1379118/102‑1 (MQ=255)
                                                                                               ggcggTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGt                                                                          >  2:1379118/1‑102 (MQ=255)
                                                                                                   gTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACAccc                                                                                                                               >  1:1243018/1‑45 (MQ=255)
                                                                                                   gTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACAccc                                                                                                                               <  2:1243018/45‑1 (MQ=255)
                                                                                                   gTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGc                                                                                                     >  2:890984/1‑71 (MQ=255)
                                                                                                   gTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGc                                                                                                     <  1:890984/71‑1 (MQ=255)
                                                                                                   gTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCg                                                                                        >  1:482003/1‑84 (MQ=255)
                                                                                                   gTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCg                                                                                        <  2:482003/84‑1 (MQ=255)
                                                                                                   gTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACAt                                                                              >  1:1063973/1‑94 (MQ=255)
                                                                                                   gTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACAt                                                                              <  2:1063973/94‑1 (MQ=255)
                                                                                                    tGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCg                                             >  1:1488181/1‑126 (MQ=255)
                                                                                                    tGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCg                                             <  2:1488181/126‑1 (MQ=255)
                                                                                                        gTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGc                                                                                                     >  2:1691433/1‑66 (MQ=255)
                                                                                                        gTAAACGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGc                                                                                                     <  1:1691433/66‑1 (MQ=255)
                                                                                                            aCGCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGgtgt                        <  1:941377/139‑1 (MQ=255)
                                                                                                              gCCGGGTAACTGCCAGATCAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGc                                              <  2:1013023/115‑1 (MQ=255)
                                                                                                              gCCGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGc                                              >  1:1013023/1‑115 (MQ=255)
                                                                                                                cGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAAtc                                                                                                 <  2:901245/62‑1 (MQ=255)
                                                                                                                cGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAAtc                                                                                                 >  1:901245/1‑62 (MQ=255)
                                                                                                                cGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTAACCGCATGCAGCGTGGCTACGGGCATCggg                            >  1:717984/1‑131 (MQ=255)
                                                                                                                cGGGTAACTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTAACCGCATGCAGCGTGGCTACGGGCATCggg                            <  2:717984/131‑1 (MQ=255)
                                                                                                                   gTAACTGCCAGAACAGACGCCCCACACCCCAGaaa                                                                                                                         >  1:1342902/1‑35 (MQ=255)
                                                                                                                   gTAACTGCCAGAACAGACGCCCCACACCCCAGaaa                                                                                                                         <  2:1342902/35‑1 (MQ=255)
                                                                                                                   gTAACTGCCAGAACAGAAGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCATGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTcc                 >  2:969030/1‑139 (MQ=255)
                                                                                                                      aCTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCcagg              <  1:969030/139‑1 (MQ=255)
                                                                                                                      aCTGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCcagg              <  2:201493/139‑1 (MQ=255)
                                                                                                                        tGCCAGAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCcaggca            <  2:229177/139‑1 (MQ=255)
                                                                                                                             gAACAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCa       >  1:1070531/1‑139 (MQ=255)
                                                                                                                              aaCAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCAt      <  1:338678/139‑1 (MQ=255)
                                                                                                                                cAGACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATcg    <  2:1070531/139‑1 (MQ=255)
                                                                                                                                  gACGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATcggc  >  2:328151/1‑139 (MQ=255)
                                                                                                                                    cGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGgtgt                        <  1:686977/115‑1 (MQ=255)
                                                                                                                                    cGCCCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGgtgt                        >  2:686977/1‑115 (MQ=255)
                                                                                                                                       |                                                                                                                                     
TCGTAAACAATGCGTACCGCTTCGGCATGACCCGTATCACCGGAGCACACTTCCCGATAAGTCGGATTTGGCGTATAGCCGCCGGTATAGCCTGCGGCGGTGCTGTAAACGCCGGGTAACTGCCAGAACAGACGCTCCACACCCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC  >  NC_000913/4441872‑4442140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑