Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 675,601 Δ1 bp coding (947/978 nt) ybeQ ← Sel1 family TPR‑like repeat protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913675,6010T.100.0% 408.6 / NA 99coding (947/978 nt)ybeQSel1 family TPR‑like repeat protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (50/49);  total (50/49)

Only 100 of 103 total aligned reads displayed.

TGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCGTCATT  >  NC_000913/675467‑675728
                                                                                                                                      |                                                                                                                               
tGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTccgactg                                                                                                                            >  2:1483086/1‑139 (MQ=255)
tGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTccgactg                                                                                                                            >  2:84516/1‑139 (MQ=255)
      gTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATACAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACAtct                                                                                                                      <  1:1199762/139‑1 (MQ=255)
      gTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACAtct                                                                                                                      <  2:55443/139‑1 (MQ=255)
       ttCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACAtctc                                                                                                                     >  1:1030776/1‑139 (MQ=255)
          cAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTgg                                                                                                                  <  1:981360/139‑1 (MQ=255)
           agagACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGt                                                                                                                 >  2:725661/1‑139 (MQ=255)
                 gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGa                                                                                                           >  1:942054/1‑139 (MQ=255)
                 gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGa                                                                                                           >  1:258183/1‑139 (MQ=255)
                      tttGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACt                                                                                                      >  1:668288/1‑139 (MQ=255)
                         gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                   <  2:1030776/139‑1 (MQ=255)
                         gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                   <  2:942054/139‑1 (MQ=255)
                         gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                   <  2:1326141/139‑1 (MQ=255)
                         gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                   <  1:1545177/139‑1 (MQ=255)
                           gCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACt                                                                                                 >  2:1565284/1‑139 (MQ=255)
                                    gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAc                                                                                        <  2:258183/139‑1 (MQ=255)
                                    gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAc                                                                                        <  1:1565284/139‑1 (MQ=255)
                                      cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCcgactgac                                                                                                                          <  2:379578/103‑1 (MQ=255)
                                      cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCcgactgac                                                                                                                          >  1:379578/1‑103 (MQ=255)
                                              taaggggcagaaaGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACCGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGagag                                                                              <  2:1119415/129‑1 (MQ=255)
                                               cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCg                                                                                                             <  2:404028/107‑1 (MQ=255)
                                               cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                                             >  2:1792682/1‑139 (MQ=255)
                                               cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                                             <  1:723579/139‑1 (MQ=255)
                                               cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                                             >  2:723579/1‑139 (MQ=255)
                                                   gCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGt                                                                         >  1:28763/1‑139 (MQ=255)
                                                            agaATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCg                                                                >  2:781480/1‑139 (MQ=255)
                                                              aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCTGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGCAGATCGAc                                                              >  2:1068950/1‑139 (MQ=255)
                                                              aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                                             >  1:1793863/1‑124 (MQ=255)
                                                              aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                                             <  2:1793863/124‑1 (MQ=255)
                                                              aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                                              >  1:1759729/1‑139 (MQ=255)
                                                              aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                                              >  2:1031581/1‑139 (MQ=255)
                                                              aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                                              >  2:20502/1‑139 (MQ=255)
                                                                 atGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAgg                                                           >  2:1605254/1‑139 (MQ=255)
                                                                 atGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAgg                                                           <  2:668288/139‑1 (MQ=255)
                                                                   gggCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGt                                                                         <  2:1295885/123‑1 (MQ=255)
                                                                   gggCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGt                                                                         >  1:1295885/1‑123 (MQ=255)
                                                                   gggCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTAAGTTTCACGAATTTCCGCCTGACATCTTTGTTTCCGGATGATTGAACTTTCCGATACAGGTCGAGGGCCTGTGGaagactgtctctta                                                         >  1:1119415/1‑129 (MQ=255)
                                                                         aaTGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                   >  2:1510804/1‑91 (MQ=255)
                                                                         aaTGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                   <  1:1510804/91‑1 (MQ=255)
                                                                         aaTGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                                                   <  2:28763/139‑1 (MQ=255)
                                                                         aaTGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                                                   <  1:869925/139‑1 (MQ=255)
                                                                         aaTGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                                                   >  2:392216/1‑139 (MQ=255)
                                                                         aaTGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                                                   <  1:1290826/139‑1 (MQ=255)
                                                                         aaTGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                                                   <  1:1792682/139‑1 (MQ=255)
                                                                              aaTTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                              <  1:1483086/139‑1 (MQ=255)
                                                                              aaTTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                              <  1:725661/139‑1 (MQ=255)
                                                                               aTTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAgg                                                           >  2:1480116/1‑125 (MQ=255)
                                                                               aTTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAgg                                                           <  1:1480116/125‑1 (MQ=255)
                                                                                 tCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAg                                           <  1:1605254/139‑1 (MQ=255)
                                                                                   cccGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                                            >  1:677790/1‑136 (MQ=255)
                                                                                   cccGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                                            <  2:677790/136‑1 (MQ=255)
                                                                                     cGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTgg                                                                                                                  <  1:396559/64‑1 (MQ=255)
                                                                                     cGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTgg                                                                                                                  >  2:396559/1‑64 (MQ=255)
                                                                                     cGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTgg                                                                                                                  <  1:1448579/64‑1 (MQ=255)
                                                                                     cGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTgg                                                                                                                  >  2:1448579/1‑64 (MQ=255)
                                                                                               ttttATCTTTACCGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACGGGTCGTCCTTCTCCGTAGTGATACATAATGGc                             <  1:1068950/139‑1 (MQ=255)
                                                                                               ttttATCTTTACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                             <  2:1759729/139‑1 (MQ=255)
                                                                                                       ttACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTct                                                        <  1:1428378/103‑1 (MQ=255)
                                                                                                       ttACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTct                                                        >  2:1428378/2‑104 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGa                                                                                           >  2:122563/1‑68 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGa                                                                                           <  1:122563/68‑1 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                              <  2:567909/113‑1 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                              >  1:567909/1‑113 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg                              <  1:30059/129‑1 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg                              >  2:30059/1‑129 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                             >  2:969912/1‑130 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                             <  1:969912/130‑1 (MQ=255)
                                                                                                        tACAGTAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTtata                    >  1:1463291/1‑139 (MQ=255)
                                                                                                             tAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAc                                                                                        >  2:461687/1‑66 (MQ=255)
                                                                                                             tAAATCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAc                                                                                        <  1:461687/66‑1 (MQ=255)
                                                                                                               aaTCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTtctc                                                <  1:1042517/104‑1 (MQ=255)
                                                                                                               aaTCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTtctc                                                >  2:1042517/1‑104 (MQ=255)
                                                                                                               aaTCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                             <  2:883072/123‑1 (MQ=255)
                                                                                                               aaTCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                             >  1:883072/1‑123 (MQ=255)
                                                                                                               aaTCTTCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCa             >  1:1293959/1‑139 (MQ=255)
                                                                                                                    tCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTtctc                                                >  2:1779366/1‑99 (MQ=255)
                                                                                                                    tCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTtctc                                                <  1:1779366/99‑1 (MQ=255)
                                                                                                                    tCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                              <  2:1083347/101‑1 (MQ=255)
                                                                                                                    tCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                              >  1:1083347/1‑101 (MQ=255)
                                                                                                                    tCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                              >  1:11860/1‑101 (MQ=255)
                                                                                                                    tCAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                              <  2:11860/101‑1 (MQ=255)
                                                                                                                     cAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg                              <  2:1423926/116‑1 (MQ=255)
                                                                                                                     cAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg                              >  1:1423926/1‑116 (MQ=255)
                                                                                                                     cAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTtata                    >  2:1093449/1‑126 (MQ=255)
                                                                                                                     cAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTtata                    <  1:1093449/126‑1 (MQ=255)
                                                                                                                     cAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGt           <  2:948999/135‑1 (MQ=255)
                                                                                                                     cAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGt           >  1:948999/1‑135 (MQ=255)
                                                                                                                     cAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCg       >  1:743179/1‑139 (MQ=255)
                                                                                                                     cAGTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCg       >  2:1676291/1‑139 (MQ=255)
                                                                                                                       gTCTCACGAATTTCCGACTGACATCTCTGGTTCCTGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                                             <  1:972563/83‑1 (MQ=255)
                                                                                                                       gTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACtt                                                                                                <  2:1724600/48‑1 (MQ=255)
                                                                                                                       gTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACtt                                                                                                >  1:1724600/1‑48 (MQ=255)
                                                                                                                       gTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                                             >  2:174244/1‑83 (MQ=255)
                                                                                                                       gTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                                             <  1:174244/83‑1 (MQ=255)
                                                                                                                       gTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                                                      >  1:1393173/1‑90 (MQ=255)
                                                                                                                       gTCTCACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                                                      <  2:1393173/90‑1 (MQ=255)
                                                                                                                          tcACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCGTCAtt  >  2:771879/1‑139 (MQ=255)
                                                                                                                          tcACGAATTTCCGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCGTCAtt  >  1:602485/1‑139 (MQ=255)
                                                                                                                             cGAATTTCCGACTGACATCTCTGGTTCCGGATGACTg                                                                                                     >  2:551250/1‑37 (MQ=255)
                                                                                                                             cGAATTTCCGACTGACATCTCTGGTTCCGGATGACTg                                                                                                     <  1:551250/37‑1 (MQ=255)
                                                                                                                                      |                                                                                                                               
TGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCGTCATT  >  NC_000913/675467‑675728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: