New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 788831 =0 (0.000)71 (0.930) 42/216 0.5 94.7% coding (7/1041 nt)
coding (1149/1149 nt)
galM
galK
aldose 1‑epimerase, type‑1 mutarotase, galactose mutarotase
galactokinase
?NC_000913 3742633 = 8 (0.100)intergenic (‑101/‑100) yiaJ/yiaK transcriptional repressor for the yiaKLMNO‑lyxK‑sgbHUE operon/2,3‑diketo‑L‑gulonate reductase, NADH‑dependent

TCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAT  >  NC_000913/3742496‑3742771
                                                                                                                                         |                                                                                                                                          
tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCatcaatcct                                                                                                                                          >  2:941714/1‑137 (MQ=255)
tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCatcaatcct                                                                                                                                          >  2:1648259/1‑137 (MQ=255)
    gTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgttg                                                                                                                                      <  1:1343172/139‑7 (MQ=255)
       cgtcgcgctgatcccggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc                                                                                                                                    <  1:396850‑M2/9‑1 (MQ=255)
         ctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgttgacaat                                                                                                                                 <  1:941714/139‑12 (MQ=255)
               tgatcccggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTaaa                                                                                                                            <  2:948077‑M2/17‑1 (MQ=255)
               tgatcccggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTaaa                                                                                                                            <  1:348210‑M2/17‑1 (MQ=255)
                 atcccggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTaaaaa                                                                                                                          >  1:1501278‑M2/121‑139 (MQ=255)
                 atcccggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTaaaaa                                                                                                                          >  1:1598611‑M2/121‑139 (MQ=255)
                      ggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt                                                                                                                     <  2:12099‑M2/24‑1 (MQ=255)
                      ggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt                                                                                                                     <  2:1501278‑M2/24‑1 (MQ=255)
                           agctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGata                                                                                                                <  1:1234290‑M2/29‑1 (MQ=255)
                                  gcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGa                                                                                                         >  1:1162173‑M2/104‑139 (MQ=255)
                                                aagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCa                                                                                           <  2:14786‑M2/50‑1 (MQ=255)
                                                    tgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATAtt                                                                                       >  2:665098‑M2/86‑139 (MQ=255)
                                                         gcgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgtt                                                                                                                                       >  1:1464761/1‑80 (MQ=255)
                                                         gcgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgtt                                                                                                                                       <  2:1464761/85‑6 (MQ=255)
                                                         ctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAAt                                                                                  >  2:670894‑M2/81‑139 (MQ=255)
                                                          cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgtt                                                                                                                                       <  1:2851/84‑6 (MQ=255)
                                                          cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgtt                                                                                                                                       >  2:2851/1‑79 (MQ=255)
                                                                      agcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt                                                                                                                     >  2:223787‑M2/68‑91 (MQ=255)
                                                                      agcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt                                                                                                                     <  1:223787‑M2/24‑1 (MQ=255)
                                                                      agcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCaaaaa                                                                     <  1:665098‑M2/72‑1 (MQ=255)
                                                                              caggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCa                                                             <  1:1721464‑M2/80‑1 (MQ=255)
                                                                                           gactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGaa                                                >  1:1370948‑M2/47‑139 (MQ=255)
                                                                                           gactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGaa                                                >  2:6173‑M2/47‑139 (MQ=255)
                                                                                            actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc                                                                                                                                    <  1:319545‑M2/9‑1 (MQ=255)
                                                                                            actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc                                                                                                                                    >  2:319545‑M2/46‑54 (MQ=255)
                                                                                            actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg                                                   <  2:55014‑M2/90‑1 (MQ=255)
                                                                                            actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg                                                   >  1:55014‑M2/46‑135 (MQ=255)
                                                                                            actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAg                                               >  2:497077‑M2/46‑139 (MQ=255)
                                                                                              tttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc                                             >  1:1707954‑M2/44‑139 (MQ=255)
                                                                                               ttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCt                                            <  2:1162173‑M2/97‑1 (MQ=255)
                                                                                                tttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTg                                           >  2:907387‑M2/42‑139 (MQ=255)
                                                                                                  tacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTggg                                         <  1:6173‑M2/100‑1 (MQ=255)
                                                                                                     gtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATg                                      <  1:1738198‑M2/103‑1 (MQ=255)
                                                                                                       ttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc                                                                                                                                    >  2:916707‑M2/35‑43 (MQ=255)
                                                                                                       ttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc                                                                                                                                    <  1:916707‑M2/9‑1 (MQ=255)
                                                                                                        tgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTATTAAAAAGTGATCGATGTATTTGAAATCAAATTTCGCATATTGAAATTTTAAGCCAAAAAACCGATCTAAAAAACAAGGAAGCCTGGTATGaaa                                   >  1:1755071‑M2/34‑139 (MQ=255)
                                                                                                         gtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt                                                                                                                     <  1:491495‑M2/24‑1 (MQ=255)
                                                                                                         gtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt                                                                                                                     >  2:491495‑M2/33‑56 (MQ=255)
                                                                                                          taaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGt                                 <  2:1370948‑M2/108‑1 (MQ=255)
                                                                                                                 tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt                                                                                                                     <  1:1534041‑M2/24‑1 (MQ=255)
                                                                                                                 tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt                                                                                                                     >  2:1534041‑M2/25‑48 (MQ=255)
                                                                                                                 tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCg                                                                                                                   <  1:1625799‑M2/26‑1 (MQ=255)
                                                                                                                 tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCg                                                                                                                   >  2:1625799‑M2/25‑50 (MQ=255)
                                                                                                                 tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACAttt                          >  1:108448‑M2/25‑139 (MQ=255)
                                                                                                                 tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACAttt                          >  2:417099‑M2/25‑139 (MQ=255)
                                                                                                                  cacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTg                         >  2:1387075‑M2/24‑139 (MQ=255)
                                                                                                                    caaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAg                       <  1:497077‑M2/118‑1 (MQ=255)
                                                                                                                    caaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAg                       <  2:730641‑M2/118‑1 (MQ=255)
                                                                                                                    caaggagcaggacagtgctgaCAGATTGACTTGTTAAAAAGTGATCGATATAGTTGAACTGCAGTTTCGCATATTGAAATTTTAAGCCAAAAAAACGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAg                       <  1:1273229‑M2/118‑1 (MQ=255)
                                                                                                                           caggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa                                                            >  2:583859‑M2/15‑95 (MQ=255)
                                                                                                                           caggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa                                                            <  1:583859‑M2/81‑1 (MQ=255)
                                                                                                                           caggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTaa                >  1:8137‑M2/15‑139 (MQ=255)
                                                                                                                             ggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc                                             >  1:1261763‑M2/13‑108 (MQ=255)
                                                                                                                             ggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc                                             <  2:1261763‑M2/96‑1 (MQ=255)
                                                                                                                              gacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAag             <  1:1387075‑M2/128‑1 (MQ=255)
                                                                                                                              gacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAag             <  2:108448‑M2/128‑1 (MQ=255)
                                                                                                                                cagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGa                                                                                     <  1:48611‑M2/56‑1 (MQ=255)
                                                                                                                                cagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGa                                                                                     >  2:48611‑M2/10‑65 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc                                                                                                     <  1:333727‑M2/40‑1 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc                                                                                                     >  2:333727‑M2/7‑46 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaaaaaa                                                        >  2:436649‑M2/7‑91 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaaaaaa                                                        <  1:436649‑M2/85‑1 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGa                                                 <  1:48923‑M2/92‑1 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGa                                                 >  2:48923‑M2/7‑98 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGAt                                       <  2:1220359‑M2/102‑1 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGAt                                       >  1:1220359‑M2/7‑108 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAag             <  2:1029112‑M2/128‑1 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc        >  2:33354‑M2/7‑139 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc        >  1:637445‑M2/7‑139 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc        >  2:213283‑M2/7‑139 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc        >  1:261380‑M2/7‑139 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc        >  2:64046‑M2/7‑139 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc        >  2:1063874‑M2/7‑139 (MQ=255)
                                                                                                                                   tgctgaCAGATTGCCTTCTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGGCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAag             >  1:1029112‑M2/7‑134 (MQ=255)
                                                                                                                                        aCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGaaa                                                                                                       >  2:248079‑M2/2‑39 (MQ=255)
                                                                                                                                        aCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGaaa                                                                                                       <  1:248079‑M2/38‑1 (MQ=255)
                                                                                                                                         caGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAt  <  2:1065587/139‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                          
TCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAT  >  NC_000913/3742496‑3742771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.