BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,792,826	C→T	286 (TAG→TAA)	yibB ←	YibB family protein, function unknown

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,792,826	0	C	T	100.0%	371.5 / NA	113	286 (TAG→TAA)	yibB	YibB family protein, function unknown
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (58/55); total (58/55)

Only 100 of 113 total aligned reads displayed.

TACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACCTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGTTTGTAA  >  NC_000913/3792699‑3792958

tACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGa                                                                                                                            >  2:152283/1‑139 (MQ=255)

          gCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAAtt                                                                                                                  >  2:1022423/1‑139 (MQ=255)

               gCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAg                                                                                                             >  2:1406222/1‑139 (MQ=255)

                         gattgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCa                                                                                                              <  1:720490/128‑1 (MQ=255)

                         gattgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCa                                                                                                              >  2:720490/1‑128 (MQ=255)

                         gattgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtt                                                                                                   >  2:83314/1‑139 (MQ=255)

                          attgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAgg                                                                                                                        >  1:977444/1‑117 (MQ=255)

                          attgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAttt                                                                                                  >  1:716817/1‑139 (MQ=255)

                          attgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAttt                                                                                                  >  2:378194/1‑139 (MQ=255)

                           ttgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt                                                                                                 <  2:716817/139‑1 (MQ=255)

                             gattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg                                                                                               <  1:1022423/139‑1 (MQ=255)

                             gattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg                                                                                               <  2:817974/139‑1 (MQ=255)

                                   aCTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgc                                                                                                            >  1:1748519/1‑120 (MQ=255)

                                   aCTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgc                                                                                                            <  2:1748519/120‑1 (MQ=255)

                                    cTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTaa                                                                                       <  2:506873/139‑1 (MQ=255)

                                         ttGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt                                                                                  <  2:1298508/139‑1 (MQ=255)

                                         ttGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt                                                                                  >  1:1581522/1‑139 (MQ=255)

                                            atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGtt                                                                                 <  1:769554/137‑1 (MQ=255)

                                            atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGtt                                                                                 >  2:769554/1‑137 (MQ=255)

                                            atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGtt                                                                                 >  1:1561293/1‑137 (MQ=255)

                                            atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGtt                                                                                 <  2:1561293/137‑1 (MQ=255)

                                            atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTAc                                                                               >  2:645059/1‑139 (MQ=255)

                                                    aGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAag                                                                       >  2:227136/1‑139 (MQ=255)

                                                      aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgcg                                                                                                           <  2:430228/102‑1 (MQ=255)

                                                      aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgcg                                                                                                           >  1:430228/1‑102 (MQ=255)

                                                      aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca                                                                     >  1:327389/1‑139 (MQ=255)

                                                      aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca                                                                     >  1:81708/1‑139 (MQ=255)

                                                      aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca                                                                     >  2:1124792/1‑139 (MQ=255)

                                                      aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca                                                                     >  1:1252665/1‑139 (MQ=255)

                                                                    aaGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGaaa                                                               >  1:1342160/1‑131 (MQ=255)

                                                                    aaGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGaaa                                                               <  2:1342160/131‑1 (MQ=255)

                                                                            tttttCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGaa                                                                                                                      >  2:1384487/1‑69 (MQ=255)

                                                                                tCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCctc                                           <  1:152283/139‑1 (MQ=255)

                                                                                 ccTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg                                                                                               <  1:1605931/87‑1 (MQ=255)

                                                                                 ccTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg                                                                                               >  2:1605931/1‑87 (MQ=255)

                                                                                   tATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTcc                                        <  2:336976/139‑1 (MQ=255)

                                                                                   tATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTcc                                        <  1:1124792/139‑1 (MQ=255)

                                                                                    aTCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt                                                                                                 >  1:1237766/1‑82 (MQ=255)

                                                                                    aTCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt                                                                                                 <  2:1237766/82‑1 (MQ=255)

                                                                                    aTCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTcc                                             >  2:1063303/1‑133 (MQ=255)

                                                                                    aTCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTcc                                             <  1:1063303/133‑1 (MQ=255)

                                                                                     tctcAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt                                                                                  <  1:1494168/95‑1 (MQ=255)

                                                                                       tcAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAg                                    <  2:1252665/139‑1 (MQ=255)

                                                                                         aGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAg                                    <  1:508598/137‑1 (MQ=255)

                                                                                           ttGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAg                                >  2:176924/1‑139 (MQ=255)

                                                                                            tGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt                               <  1:227136/139‑1 (MQ=255)

                                                                                            tGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt                               <  2:1225146/139‑1 (MQ=255)

                                                                                              gTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGttt                             <  2:81708/139‑1 (MQ=255)

                                                                                               tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt                                                                                                 >  1:765630/1‑71 (MQ=255)

                                                                                               tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt                                                                                                 <  2:765630/71‑1 (MQ=255)

                                                                                               tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTa                                                                                        >  1:1101105/1‑79 (MQ=255)

                                                                                               tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTa                                                                                        <  2:1101105/79‑1 (MQ=255)

                                                                                               tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTcc                                             >  2:415784/1‑122 (MQ=255)

                                                                                               tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTcc                                             <  1:415784/122‑1 (MQ=255)

                                                                                               tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTa                            >  2:8642/1‑139 (MQ=255)

                                                                                               tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTa                            >  2:587021/1‑139 (MQ=255)

                                                                                                aTCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAg                           >  2:1148004/1‑139 (MQ=255)

                                                                                                     aaCGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt                                                                                  <  2:743114/79‑1 (MQ=255)

                                                                                                     aaCGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt                                                                                  >  1:743114/1‑79 (MQ=255)

                                                                                                     aaCGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt                               <  2:1288499/130‑1 (MQ=255)

                                                                                                     aaCGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGAGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATCGt                               >  1:1288499/1‑130 (MQ=255)

                                                                                                     aaCGCTA‑CCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGaa                     >  2:659637/1‑139 (MQ=255)

                                                                                                        gCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgcgc                                                                                                          <  2:628392/53‑1 (MQ=255)

                                                                                                        gCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgcgc                                                                                                          >  1:628392/1‑53 (MQ=255)

                                                                                                         cTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg                                                                                               >  2:11518/1‑63 (MQ=255)

                                                                                                         cTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTGCCCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAaga                   >  1:1455831/1‑139 (MQ=255)

                                                                                                         cTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAagag                  >  1:487725/1‑139 (MQ=255)

                                                                                                         cTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAagag                  >  1:1005097/1‑139 (MQ=255)

                                                                                                             ccACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCg              <  1:1311985/139‑1 (MQ=255)

                                                                                                               aCTAATGGAGGGAAACTTATTTTCTTTAAAGGAAAATACTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCggg            <  1:1145335/139‑1 (MQ=255)

                                                                                                               aCTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCggg            <  2:1005097/139‑1 (MQ=255)

                                                                                                               aCTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCggg            <  1:587021/139‑1 (MQ=255)

                                                                                                                    tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGc          <  2:1321199/136‑1 (MQ=255)

                                                                                                                    tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGc          >  1:1321199/1‑136 (MQ=255)

                                                                                                                    tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGtt       <  1:1148004/139‑1 (MQ=255)

                                                                                                                    tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGtt       <  1:204634/139‑1 (MQ=255)

                                                                                                                    tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGtt       <  1:733587/139‑1 (MQ=255)

                                                                                                                      gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt                                                                                  >  1:1382264/1‑62 (MQ=255)

                                                                                                                      gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt                                                                                  <  2:1382264/62‑1 (MQ=255)

                                                                                                                      gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca                                                                     <  1:1420456/75‑1 (MQ=255)

                                                                                                                      gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca                                                                     >  2:1420456/1‑75 (MQ=255)

                                                                                                                      gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt                               >  2:1237363/1‑113 (MQ=255)

                                                                                                                      gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt                               <  1:1237363/113‑1 (MQ=255)

                                                                                                                      gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGTTTg     >  2:1402771/1‑139 (MQ=255)

                                                                                                                         ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtg                                                                                   <  2:170507/58‑1 (MQ=255)

                                                                                                                         ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAg                                                                                     >  1:383831/1‑56 (MQ=255)

                                                                                                                         ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAg                                                                                     <  2:383831/56‑1 (MQ=255)

                                                                                                                         ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACaaa                                                           >  2:359343/1‑82 (MQ=255)

                                                                                                                         ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACaaa                                                           <  1:359343/82‑1 (MQ=255)

                                                                                                                         ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCg                                                        >  1:21311/1‑85 (MQ=255)

                                                                                                                         ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCg                                                        <  2:21311/85‑1 (MQ=255)

                                                                                                                         ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCct                                            >  1:218627/1‑97 (MQ=255)

                                                                                                                          gAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGaa                                                      <  2:565777/86‑1 (MQ=255)

                                                                                                                          gAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGaa                                                      >  1:565777/1‑86 (MQ=255)

                                                                                                                          gAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAg                                    <  1:1104607/104‑1 (MQ=255)

                                                                                                                          gAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAg                                    >  2:1104607/1‑104 (MQ=255)

                                                                                                                           aaaCTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCg                                                        <  2:855936/83‑1 (MQ=255)

                                                                                                                           aaaCTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTc                                              >  1:1421128/1‑93 (MQ=255)

                                                                                                                           aaaCTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTc                                              <  2:1421128/93‑1 (MQ=255)

                                                                                                                           aaaCTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGtt       >  1:743812/1‑132 (MQ=255)

TACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACCTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGTTTGTAA  >  NC_000913/3792699‑3792958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`