| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,549,054 | T→C | S83P (TCG→CCG) | fimH → | minor component of type 1 fimbriae |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,549,054 | 0 | T | C | 97.6% | 287.1 / ‑3.0 | 84 | S83P (TCG→CCG) | fimH | minor component of type 1 fimbriae |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (38/44); total (39/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.48e-01 | |||||||||||
GTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGG > NC_000913/4548928‑4549186 | gTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATggcg < 1:56646/139‑1 (MQ=255) ttATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATggcggc < 2:623121/139‑1 (MQ=255) ttATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATggcggc < 1:144120/139‑1 (MQ=255) tGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCgtg < 2:572433/139‑1 (MQ=255) aaCCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTAt > 2:1492944/1‑139 (MQ=255) ccTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCt > 2:1695094/1‑139 (MQ=255) tGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAAt > 2:464004/1‑139 (MQ=255) tGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAAt > 2:1421177/1‑139 (MQ=255) gcgcCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAAtt > 2:1059946/1‑139 (MQ=255) cgcCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAAttt > 1:1639790/1‑139 (MQ=255) tcgtGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCgg < 1:1791068/139‑1 (MQ=255) tcgtGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCgg < 2:1183133/139‑1 (MQ=255) tcgtGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCgg < 2:1345187/139‑1 (MQ=255) gtGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 2:1006874/139‑1 (MQ=255) gtGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 1:1607369/139‑1 (MQ=255) gtGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 2:214931/139‑1 (MQ=255) aaTGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCg < 2:620436/139‑1 (MQ=255) tgtgGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTa < 1:255608/139‑1 (MQ=255) ggggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTaaaa > 1:213460/1‑139 (MQ=255) gggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTa > 1:1535861/1‑101 (MQ=255) gggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTa < 2:1535861/101‑1 (MQ=255) gggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAat > 1:758149/1‑139 (MQ=255) gggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAat > 1:466880/1‑139 (MQ=255) gggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAat > 2:797434/1‑139 (MQ=255) gggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAat > 1:1375331/1‑139 (MQ=255) gggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAat > 2:652857/1‑139 (MQ=255) cAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAAtata < 1:464004/139‑1 (MQ=255) ccTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGc < 2:758149/139‑1 (MQ=255) cGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGc < 1:444963/139‑1 (MQ=255) gATTTTTCGACCCAAATTTTTTTGCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATc < 1:105531/139‑1 (MQ=255) ttCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 2:42306/107‑1 (MQ=255) ttCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa > 1:42306/1‑107 (MQ=255) cGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTac > 1:235389/1‑139 (MQ=255) gCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCTTGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTacc > 1:35389/1‑139 (MQ=255) aaaTCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTaccac < 1:797434/139‑1 (MQ=255) aaaTCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTaccac < 1:1695094/139‑1 (MQ=255) aaTCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa > 1:491405/1‑98 (MQ=255) aaTCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 2:491405/98‑1 (MQ=255) ttGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGaa > 2:1600277/1‑139 (MQ=255) aaCGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGTTTATGGCGGCGTGTTATCTATTTTTTCCGGGACCGTAAAATATCGTGTCAGTAGCTATCCATTTCCTACCACCAGCGAAAcgccgc < 1:1708120/139‑1 (MQ=255) aaCGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 1:486623/85‑1 (MQ=255) aaCGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa > 2:486623/1‑85 (MQ=255) cGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCTTGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgc < 2:35389/139‑1 (MQ=255) cGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgc < 1:1492944/139‑1 (MQ=255) gATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgcg < 1:1059946/139‑1 (MQ=255) gATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgcg < 2:466880/139‑1 (MQ=255) gATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgcg < 2:418805/139‑1 (MQ=255) gATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgcg < 2:1375331/139‑1 (MQ=255) aaaCCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 1:1649524/72‑1 (MQ=255) aaaCCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa > 2:1649524/1‑72 (MQ=255) aaaCCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAAtata > 1:1391243/1‑84 (MQ=255) aaaCCATTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAAtata < 2:1391243/84‑1 (MQ=255) gttACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTacc < 2:1151360/104‑1 (MQ=255) aTTACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTacc > 1:1151360/1‑105 (MQ=255) tACAGACTATGTCACACTGCAACGATGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCgttgtt > 2:113510/1‑127 (MQ=255) tACAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCgttgtt < 1:113510/127‑1 (MQ=255) aCAGACTATGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGaa < 1:1421177/139‑1 (MQ=255) tGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCgg < 1:1365043/54‑1 (MQ=255) tGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCgg > 2:1365043/1‑54 (MQ=255) tGTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAg > 2:257063/1‑139 (MQ=255) gTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 1:1025207/55‑1 (MQ=255) gTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa < 1:1333287/55‑1 (MQ=255) gTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa > 2:1333287/1‑55 (MQ=255) gTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGa > 2:1025207/1‑55 (MQ=255) gTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAg > 2:341770/1‑77 (MQ=255) gTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAg < 1:341770/77‑1 (MQ=255) gTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTacc < 1:617473/93‑1 (MQ=255) gTCACACTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTacc > 2:617473/1‑93 (MQ=255) acTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCa > 1:1586351/1‑79 (MQ=255) acTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCa < 2:1586351/79‑1 (MQ=255) acTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgcg < 1:660659/107‑1 (MQ=255) acTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgcg > 2:660659/1‑107 (MQ=255) acTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGaa < 2:1294874/125‑1 (MQ=255) acTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGaa > 1:1294874/1‑125 (MQ=255) acTGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTgg > 2:1526578/1‑139 (MQ=255) tGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGaa > 2:793870/1‑123 (MQ=255) tGCAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGaa < 1:793870/123‑1 (MQ=255) cAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCa > 1:1337704/1‑75 (MQ=255) cAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCa < 2:1337704/75‑1 (MQ=255) cAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCgg > 1:61730/1‑139 (MQ=255) cAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCgg > 2:1262586/1‑139 (MQ=255) cAACGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCgg > 2:1329037/1‑139 (MQ=255) cGAGGCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTgg > 2:403555/1‑139 (MQ=255) ggCCCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAg < 1:855552/62‑1 (MQ=255) | GTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGG > NC_000913/4548928‑4549186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |