| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 928,926 | G→A | R90R (CGC→CGT) | cydC ← | glutathione/cysteine ABC transporter export permease/ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 928,926 | 0 | G | A | 100.0% | 146.6 / NA | 45 | R90R (CGC→CGT) | cydC | glutathione/cysteine ABC transporter export permease/ATPase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (20/25); total (20/25) | |||||||||||
ATCGAGCGTATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACGCGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGTTGAAGCTGTACAGTCCGGCAACCCCCGCAACC > NC_000913/928803‑929055 | atCGAGCGTATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGAGGGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGcgtc < 2:1635608/139‑1 (MQ=255) tCGAGCGTATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGcgtcgt > 1:1109127/1‑139 (MQ=255) tCGAGCGTATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGcgtcgt > 2:281135/1‑139 (MQ=255) tCGAGCGTATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGcgtcgt > 1:1503155/1‑139 (MQ=255) tCGAGCGTATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGcgtcgt < 1:515624/139‑1 (MQ=255) gTATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTa > 2:290505/1‑139 (MQ=255) tATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGcgtcg < 2:310433/131‑1 (MQ=255) tATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGcgtcg > 1:310433/1‑131 (MQ=255) cAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg < 1:1622946/139‑1 (MQ=255) cAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCACCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg < 2:1544244/139‑1 (MQ=255) gCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGa < 2:937572/123‑1 (MQ=255) gCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGa > 1:937572/1‑123 (MQ=255) gCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCaa > 2:944932/1‑139 (MQ=255) cacGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg > 1:1053272/1‑126 (MQ=255) cacGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg < 2:1053272/126‑1 (MQ=255) tGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGc < 1:465088/139‑1 (MQ=255) tCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGccc > 2:1046279/1‑139 (MQ=255) ggCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCa < 1:237409/139‑1 (MQ=255) cAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGccc > 1:1271454/1‑100 (MQ=255) cAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGccc < 2:1271454/100‑1 (MQ=255) cAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGc < 1:1046279/139‑1 (MQ=255) cAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGc > 2:809110/1‑139 (MQ=255) cAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGc < 2:1503155/139‑1 (MQ=255) ggggAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCgg < 1:1554529/139‑1 (MQ=255) gggAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCggg < 1:809110/139‑1 (MQ=255) ggggCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTAAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCat < 1:944932/139‑1 (MQ=255) cagcaATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg < 2:1276586/69‑1 (MQ=255) cagcaATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg > 1:1276586/1‑69 (MQ=255) cagcaATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGccc > 2:114251/1‑87 (MQ=255) cagcaATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGccc < 1:114251/87‑1 (MQ=255) agcaATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGt < 1:281135/139‑1 (MQ=255) agcaATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGt < 1:871565/139‑1 (MQ=255) gcaATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg > 2:1389124/1‑67 (MQ=255) gcaATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg < 1:1389124/67‑1 (MQ=255) tttGCTGAAGGTGTAAATGCGCAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGTTGAAg < 1:427849/139‑1 (MQ=255) cgcAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGTTGAAGCTGTACAGTCCGGCAAccc > 2:544555/1‑139 (MQ=255) gcAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCa < 2:1582883/98‑1 (MQ=255) gcAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCa > 1:1582883/1‑98 (MQ=255) gcAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGTTGAAGCTGTACAGTCCGGCAAcccc > 2:516958/1‑139 (MQ=255) gcAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGTTGAAGCTGTACAGTCCGGCAAcccc < 1:544555/139‑1 (MQ=255) cAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCcacg > 2:364583/1‑87 (MQ=255) cAGATGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCcacg < 1:364583/87‑1 (MQ=255) aTGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg < 1:710804/39‑1 (MQ=255) aTGCTGCAACACACGGAAAGTCGCGTCGTGACTTACCAg > 2:710804/1‑39 (MQ=255) ctgcAACACACGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGTTGAAGCTGTACAGTCCGGCAACCCCCGCAAcc > 2:199748/1‑139 (MQ=255) | ATCGAGCGTATCAACATCCGCCACCACGCGATTGAGCAATTCGCCCTGACGATAGCGCGCCAGTCCGGCAGGGGAGA‑GGGGCAGCAATTTGCTGAAGGTGTAAATGCGCAGATGCTGCAACACGCGGAAAGTCGCGTCGTGACTTACCAGACGTTCAAAATAGCGCCCGGCAGTACGGGTGATTGCTGCGCCACGCACGCCCGCAGCGGGTAGCATATAGTTGAAGCTGTACAGTCCGGCAACCCCCGCAACC > NC_000913/928803‑929055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |