Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,335,862 | A→G | D11G (GAC→GGC) | acnA → | aconitate hydratase 1, aconitase A |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,335,862 | 0 | A | G | 100.0% | 234.3 / NA | 66 | D11G (GAC→GGC) | acnA | aconitate hydratase 1, aconitase A |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (39/27); total (39/27) |
TCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGATGGT > NC_000913/1335728‑1335995 | tCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACg > 1:1352815/1‑139 (MQ=255) aTTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTg < 2:106522/139‑1 (MQ=255) tttGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTGACCCTGTAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTCCGAGAAGCCAGTGAGGGCACGTTGc > 1:1261183/1‑139 (MQ=255) tttGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGc < 1:142432/139‑1 (MQ=255) aTCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGAt > 1:1069806/1‑139 (MQ=255) aaTCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATaaaa > 1:116523/1‑139 (MQ=255) aCGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCa < 2:1660508/139‑1 (MQ=255) aCGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCa < 1:1386930/139‑1 (MQ=255) aTCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCg > 2:1176805/1‑139 (MQ=255) aTCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCg > 2:607673/1‑139 (MQ=255) tAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTtgc < 1:607673/139‑1 (MQ=255) aaTATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTtgct > 2:414158/1‑139 (MQ=255) aaTATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTtgct > 1:943945/1‑139 (MQ=255) tCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTaa > 1:751329/1‑139 (MQ=255) aCCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAAt > 2:571571/1‑139 (MQ=255) aCCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAAt > 2:296180/1‑139 (MQ=255) ccTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTAcc < 1:1362663/107‑1 (MQ=255) ccTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTAcc > 2:1362663/1‑107 (MQ=255) agagAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGgca > 1:488283/1‑75 (MQ=255) agagAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGgca < 2:488283/75‑1 (MQ=255) aaTCAGGCCTTCGCAACCCTGTCAATAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGat > 1:1011996/1‑139 (MQ=255) aTCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTggg > 2:897427/1‑134 (MQ=255) aTCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTggg < 1:897427/134‑1 (MQ=255) aTCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGata > 1:1189615/1‑139 (MQ=255) aTCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGata > 1:963551/1‑139 (MQ=255) gggCTTCGCAACCCTGTCATTTAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTCGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATCTCAc < 2:963551/139‑1 (MQ=255) gggCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGc > 1:1259246/1‑104 (MQ=255) gggCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGc < 2:1259246/104‑1 (MQ=255) gggCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCAc > 1:344338/1‑139 (MQ=255) gggCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCAc > 2:1029/1‑139 (MQ=255) cTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCa < 2:987103/91‑1 (MQ=255) cTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCa > 1:987103/1‑91 (MQ=255) ttCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGt < 1:1029/139‑1 (MQ=255) ttCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGt < 2:344338/139‑1 (MQ=255) tCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTAcc > 1:125220/1‑88 (MQ=255) tCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTAcc < 2:125220/88‑1 (MQ=255) cTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAg < 1:571571/139‑1 (MQ=255) tCATTAAGGAGGAGCTATGTCGTCAACACTACAAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGGCTACCCAAGTCa > 2:986419/1‑139 (MQ=255) aaGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCTCTGGGCGATATCAccc < 1:646051/120‑1 (MQ=255) aaGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCAccc > 2:646051/1‑120 (MQ=255) ggagCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTtgctg < 1:693281/91‑1 (MQ=255) ggagCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTtgctg > 2:693281/1‑91 (MQ=255) ggagCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGttt > 1:899830/1‑139 (MQ=255) ggagCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGttt > 1:450959/1‑139 (MQ=255) ggagCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGttt > 1:1352624/1‑139 (MQ=255) agCTATGTCGTCAACCCTACGAGAAGCCAGAAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTg > 1:1565897/1‑139 (MQ=255) tcAACCCTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAAcc > 2:878513/1‑139 (MQ=255) ccTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTgg > 1:1011679/1‑86 (MQ=255) ccTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTgg < 2:1011679/86‑1 (MQ=255) ccTACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACctgctg > 2:1487046/1‑139 (MQ=255) tACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCtgctgc > 2:1635466/1‑138 (MQ=255) tACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCtgctgc < 1:1635466/138‑1 (MQ=255) tACGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTgcg > 2:1498587/1‑139 (MQ=255) aCGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTgcgc < 1:1487046/139‑1 (MQ=255) cGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACtt > 1:900049/1‑43 (MQ=255) cGAGAAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACtt < 2:900049/43‑1 (MQ=255) gagaAGCCAGTAAGGGCACGTTGCAGGCCAAAGATa < 2:182446/36‑1 (MQ=38) gagaAGCCAGTAAGGGCACGTTGCAGGCCAAAGATa > 1:182446/1‑36 (MQ=255) agaAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTgg < 2:1011996/139‑1 (MQ=255) gaAGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGc < 2:1189615/139‑1 (MQ=255) aGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAg > 2:28602/1‑139 (MQ=255) aGCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAg > 2:326249/1‑139 (MQ=255) gCCAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAgg > 2:127470/1‑139 (MQ=255) ccAGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGa < 1:28602/139‑1 (MQ=255) aGTAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGATg > 1:720719/1‑139 (MQ=255) tAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGATGGt < 2:899830/139‑1 (MQ=255) tAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGATGGt < 2:1352624/139‑1 (MQ=255) tAAGGGCACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGATGGt < 1:414158/139‑1 (MQ=255) | TCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGATGGT > NC_000913/1335728‑1335995 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |