| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,733,703 | G→A | *1539* (TAG→TAA) | lhr → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,733,703 | 0 | G | A | 100.0% | 141.4 / NA | 44 | *1539* (TAG→TAA) | lhr | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (24/20); total (24/20) | |||||||||||
CGTCGCGAACCACGGCTGCGCTTTACGCTAACAGA‑AGTGAATGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACG > NC_000913/1733575‑1733825 | gcgtccgAAACACGGCCTCGGTTTTAGCTAA‑AGAGAGGGAAAGGTCTACCGGTCCGGCAAAACCCGAATGTTTCCCCGGCT‑CGGGAGGCGGGGATTTTAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACt < 2:238822/134‑1 (MQ=255) cgcTTTACGCTAACAGA‑AGTGAATGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCg < 2:1606550/137‑1 (MQ=255) cgcTTTACGCTAACAGA‑AGTGAATGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCa > 1:202444/1‑139 (MQ=255) cgcTTTACGCTAACAGA‑AGTGAATGATCTACCGGTCCGGCAAACGCCG‑ATGCTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCg > 1:1606550/1‑137 (MQ=255) tACGCTAACAGA‑AGTGAATGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGt < 1:172079/139‑1 (MQ=255) cAGA‑AGTGAATGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCg < 2:1419123/124‑1 (MQ=255) cAGA‑AGTGAATGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCg > 1:1419123/1‑124 (MQ=255) aaTGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAg < 1:1094625/126‑1 (MQ=255) aaTGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAg > 2:1094625/1‑126 (MQ=255) aTGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGa > 2:424566/1‑139 (MQ=255) tCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCGGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGattat > 2:985853/1‑139 (MQ=255) aCCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTcc > 2:1546831/1‑139 (MQ=255) ggTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCcgcg < 1:424566/139‑1 (MQ=255) ccGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCa < 1:296835/104‑1 (MQ=255) ccGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCa > 2:296835/1‑104 (MQ=255) cGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAaaga > 2:803336/1‑78 (MQ=255) cGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAaaga < 1:803336/78‑1 (MQ=255) cGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGt < 1:96558/98‑1 (MQ=255) cGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGt > 2:96558/1‑98 (MQ=255) cGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCa > 2:508769/1‑118 (MQ=255) cGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCa < 1:508769/118‑1 (MQ=255) cGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCg > 1:659555/1‑139 (MQ=255) cGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCg > 1:1238551/1‑139 (MQ=255) gCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGc > 1:1288681/1‑139 (MQ=255) tttACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGt > 2:1181864/1‑139 (MQ=255) gctgcGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCg > 2:186135/1‑139 (MQ=255) ctgcGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCgg > 2:311636/1‑139 (MQ=255) ctgaGTGAGGCGGGATTTTCAAGTTCGACACAAGAGCTGACTTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATGCGTCAGTATTGCATGACGGATTATTCCTCGTCCGGCTCTTCAGTCTTGTATGTAGTgg > 2:1489271/1‑139 (MQ=255) cGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGGAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAg < 2:334521/139‑1 (MQ=255) ggCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCt > 2:827472/1‑139 (MQ=255) gATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGGCTTGTATTTAGCGGCAGTTTCTTTGAt > 1:1153781/1‑139 (MQ=255) tttCAAGTTCGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAg < 1:1178236/139‑1 (MQ=255) ttCGCCACTAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGCATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCtgctgc < 1:985853/139‑1 (MQ=255) cGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGttt > 1:509011/1‑120 (MQ=255) cGCCACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGttt < 2:509011/120‑1 (MQ=255) ccACAAGGGCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGtt < 2:202444/139‑1 (MQ=255) ggCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGGCTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACg < 2:1153781/139‑1 (MQ=255) ggCTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACg < 2:1238551/139‑1 (MQ=255) cTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCgg > 2:133643/1‑80 (MQ=255) cTGGATTGGGGATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCgg < 1:133643/80‑1 (MQ=255) gggATAAAGAAAGGACTGACGGATGCCCGTTCGCa < 1:1453983/35‑1 (MQ=255) gggATAAAGAAAGGACTGACGGATGCCCGTTCGCa > 2:1453983/1‑35 (MQ=255) gggATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAg < 1:1544245/43‑1 (MQ=255) gggATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAg > 2:1544245/1‑43 (MQ=255) gggATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCa > 1:577187/1‑50 (MQ=255) gggATAAAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCa < 2:577187/50‑1 (MQ=255) | CGTCGCGAACCACGGCTGCGCTTTACGCTAACAGA‑AGTGAATGATCTACCGGTCCGGCAAACGCCG‑ATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAGAGAAAGGACTGACGGATGCCCGTTCGCATCCGTCAGTATTGCAGGACGGATTATTCCGCGTCCGGCTCTTCAGACTTGTATTTAGCGGCAGTTTCTTTGATCAGCTGCTGCAGTTCGCCACG > NC_000913/1733575‑1733825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |