Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,788,238 G→A pseudogene (1842/2253 nt) ygaQ → uncharacterized protein, putative enzyme

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,788,2380GA100.0% 376.4 / NA 115pseudogene (1842/2253 nt)ygaQuncharacterized protein, putative enzyme
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (49/66);  total (49/66)

Only 100 of 115 total aligned reads displayed.

CAATGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAGCTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTCTGGCCTTTAGTCGTGGGG  >  NC_000913/2788114‑2788371
                                                                                                                             |                                                                                                                                     
cAATGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTg                                                                                                                         <  2:467692/139‑1 (MQ=255)
cAATGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTg                                                                                                                         <  2:143828/139‑1 (MQ=255)
cAATGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTg                                                                                                                         <  1:143452/139‑1 (MQ=255)
   tGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      <  2:609838/139‑1 (MQ=255)
   tGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      <  1:300599/139‑1 (MQ=255)
      cATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAG‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTAc                                                                                                                   <  2:1049907/139‑1 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAATTCAACGACTGAAATTAAAAATTATGATGGGTCCAAGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcagc                                                                                                           >  2:654336/1‑139 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTg                                                                                                                         <  1:435039/124‑1 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTg                                                                                                                         >  2:435039/1‑124 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGct                                                                                                                       <  2:289157/126‑1 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGct                                                                                                                       >  1:289157/1‑126 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcagca                                                                                                          <  1:1357322/139‑1 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcagca                                                                                                          >  1:119798/1‑139 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcagca                                                                                                          <  2:156708/139‑1 (MQ=255)
               ccGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcagc                                                                                                           <  2:679720/138‑1 (MQ=255)
                  ctctGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTTCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      <  1:1079627/124‑1 (MQ=255)
                  ctctGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGct                                                                                                       >  1:857917/1‑139 (MQ=255)
                  ctctGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAAATAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      >  2:1079627/1‑124 (MQ=255)
                            cagcagGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      >  2:568939/1‑114 (MQ=255)
                                 ggCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCa                                                                                        >  2:1067727/1‑139 (MQ=255)
                                 ggCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCa                                                                                        <  1:269747/139‑1 (MQ=255)
                                  gCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCCACGACTGGAGTTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  2:1009829/139‑1 (MQ=255)
                                  gCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       >  2:429828/1‑139 (MQ=255)
                                  gCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  1:1067727/139‑1 (MQ=255)
                                  gCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  1:429828/139‑1 (MQ=255)
                                  gCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGAGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  1:622155/139‑1 (MQ=255)
                                   ccTTTAGTTTACTGGGATGGCCAAGTATTAAAATTCAACGACTGAAATTAAAAATTATGATGGGTCCAAGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  1:654336/139‑1 (MQ=255)
                                   ccTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACg                                                                                      <  2:1028675/139‑1 (MQ=255)
                                    cTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGc                                                                                     >  1:759855/1‑139 (MQ=255)
                                      ttAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCAt                                                                                   <  1:1406467/139‑1 (MQ=255)
                                            tACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      <  2:839762/98‑1 (MQ=255)
                                            tACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGctct                                                                                                     >  2:1630491/1‑115 (MQ=255)
                                            tACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGctct                                                                                                     <  1:1630491/115‑1 (MQ=255)
                                            tACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       >  1:41000/1‑129 (MQ=255)
                                            tACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  2:1466333/129‑1 (MQ=255)
                                            tACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       >  1:1466333/1‑129 (MQ=255)
                                             aCTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATtatatat                                                                            >  2:228671/1‑139 (MQ=255)
                                                 ggATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTcc                                                                                         >  1:672289/1‑122 (MQ=255)
                                                 ggATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTcc                                                                                         <  2:672289/122‑1 (MQ=255)
                                                  gATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATa                                                                       <  2:857917/139‑1 (MQ=255)
                                                   aTGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAACGGTTGctc                                                                                                                      >  1:402496/1‑91 (MQ=255)
                                                   aTGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      <  2:402496/91‑1 (MQ=255)
                                                   aTGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATaa                                                                      <  2:448267/139‑1 (MQ=255)
                                                    tGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTtaat                                                                                                                                 <  1:2127/79‑1 (MQ=255)
                                                    tGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTtaat                                                                                                                                 >  2:2127/1‑79 (MQ=255)
                                                    tGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATaaa                                                                     >  1:755265/1‑139 (MQ=255)
                                                     ggtcAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAg                                                                    <  1:319051/136‑1 (MQ=255)
                                                     ggCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAg                                                                    <  2:755265/139‑1 (MQ=255)
                                                     ggCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAg                                                                    <  2:1231268/139‑1 (MQ=255)
                                                     ggCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAg                                                                    <  2:119798/139‑1 (MQ=255)
                                                                aaaa‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGct                                                                                                                       <  2:783059/77‑1 (MQ=255)
                                                                aaaa‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGct                                                                                                                       >  1:783059/1‑77 (MQ=255)
                                                                aaaa‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  2:40216/109‑1 (MQ=255)
                                                                aaaa‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       >  1:40216/1‑109 (MQ=255)
                                                                aaaa‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCAt                                                                                   <  1:61077/113‑1 (MQ=255)
                                                                aaaa‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCAt                                                                                   >  2:61077/1‑113 (MQ=255)
                                                                 aaa‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGa                                                        >  1:351237/1‑139 (MQ=255)
                                                                   a‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAgc                                                      <  2:759855/139‑1 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      >  1:1546915/1‑72 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGctc                                                                                                                      <  2:1546915/72‑1 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcag                                                                                                            >  2:662103/1‑82 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcag                                                                                                            <  1:662103/82‑1 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcag                                                                                                            >  2:836386/1‑82 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcag                                                                                                            <  1:836386/82‑1 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATtatat                                                                              >  2:1168452/1‑112 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATtatat                                                                              >  2:395683/1‑112 (MQ=255)
                                                                       aaCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATtatat                                                                              <  1:1168452/112‑1 (MQ=255)
                                                                        aCGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCa                                                                                    >  1:779412/1‑105 (MQ=255)
                                                                         cGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTg                                                                                                                         >  1:1549947/1‑67 (MQ=255)
                                                                               aaaTTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       >  2:36540/1‑95 (MQ=255)
                                                                               aaaTTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  1:36540/95‑1 (MQ=255)
                                                                                                gggTCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTaaaa                          <  1:791302/139‑1 (MQ=255)
                                                                                                   tCCACGTGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCa                                                                                        <  1:1031633/74‑1 (MQ=255)
                                                                                                   tCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCAt                                                                                   <  2:813952/79‑1 (MQ=255)
                                                                                                   tCCACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCAt                                                                                   >  1:813952/1‑79 (MQ=255)
                                                                                                   accACGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCa                                                                                        >  2:1031633/2‑74 (MQ=255)
                                                                                                      aCGCGTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTc                    <  1:528830/139‑1 (MQ=255)
                                                                                                       cgcgTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCa                                                                                    <  1:310421/74‑1 (MQ=255)
                                                                                                       cgcgTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCa                                                                                    >  2:1034248/1‑74 (MQ=255)
                                                                                                       cgcgTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCGACAATGAATTCCACGCa                                                                                    <  1:1034248/74‑1 (MQ=255)
                                                                                                        gcgTGTCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTCTg                  <  2:351237/139‑1 (MQ=255)
                                                                                                           tgtCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAAtt                                                                                           <  2:396022/63‑1 (MQ=255)
                                                                                                           tgtCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAAtt                                                                                           >  1:396022/1‑63 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcag                                                                                                            <  2:182074/44‑1 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATcag                                                                                                            >  1:182074/1‑44 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  2:884195/65‑1 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       <  1:1225901/65‑1 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       >  1:884195/1‑65 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCAc                                                                                       >  2:1225901/1‑65 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCa                                                                                    <  2:1175105/68‑1 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCa                                                                                    >  1:1175105/1‑68 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATaa                                                                      <  1:1634542/82‑1 (MQ=255)
                                                                                                             tCGGCGGTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATaa                                                                      >  2:1634542/1‑82 (MQ=255)
                                                                                                                 cggTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAg                                                                    <  2:125852/80‑1 (MQ=255)
                                                                                                                 cggTGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAg                                                                    >  1:125852/1‑80 (MQ=255)
                                                                                                                    tGAGGCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTCTGGCCTTTAGTCGt      >  1:1171426/1‑139 (MQ=255)
                                                                                                                        gCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTCTGGCCTTTAGTCGTgggg  <  2:1192002/139‑1 (MQ=255)
                                                                                                                        gCGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTCTGGCCTTTAGTCGTgggg  <  2:1504701/139‑1 (MQ=255)
                                                                                                                         cGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGtt                     >  2:674694/1‑119 (MQ=255)
                                                                                                                         cGTAACTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGtt                     <  1:674694/119‑1 (MQ=255)
                                                                                                                             |                                                                                                                                     
CAATGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAA‑TCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAGCTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTCTGGCCTTTAGTCGTGGGG  >  NC_000913/2788114‑2788371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑