| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 788831 = | 0 (0.000) | 48 (0.830) | 30/202 | 0.8 | 94.1% | coding (7/1041 nt) coding (1149/1149 nt) |
galM galK |
aldose 1‑epimerase, type‑1 mutarotase, galactose mutarotase galactokinase |
| ? | NC_000913 | 3742633 = | 6 (0.100) | intergenic (‑101/‑100) | yiaJ/yiaK | transcriptional repressor for the yiaKLMNO‑lyxK‑sgbHUE operon/2,3‑diketo‑L‑gulonate reductase, NADH‑dependent | |||||
TTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAT > NC_000913/3742501‑3742771 | ttCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgttga < 2:462892/139‑8 (MQ=255) cgtcgcgctgatcccggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcactaggagcaggacagtgctgaCAGATTGcc < 1:933633‑M2/9‑1 (MQ=255) tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatcctgttgacaatt > 1:524180/1‑127 (MQ=255) atcccggaagagctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCATTGTTaaaaa > 1:1043572‑M2/121‑139 (MQ=255) ccATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatc > 2:37899/1‑119 (MQ=255) ccATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatc < 1:37899/119‑1 (MQ=255) ggaagagctggtgcctgacgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGAt < 2:1043572‑M2/24‑1 (MQ=255) ctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGat < 2:291505‑M2/28‑1 (MQ=255) ctggtgcctgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGat > 1:291505‑M2/109‑136 (MQ=255) tgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAAt > 1:1053643‑M2/101‑139 (MQ=255) tgccgtacagcaagctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAAt > 2:332502‑M2/101‑139 (MQ=255) gctgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCata > 1:454208‑M2/88‑139 (MQ=255) tgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc > 2:1274211‑M2/86‑94 (MQ=255) tgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc < 1:1274211‑M2/9‑1 (MQ=255) tgtcgctgaacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATAtt > 1:1210309‑M2/86‑139 (MQ=255) cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTCatcaatc > 1:986137/1‑79 (MQ=255) cgcAAAGTGTGCCGTAATTCACGATCTCGACAGATAATTTATAA‑CAATTGATTTTTATGTCTTTTGAAATTTatcaatc < 2:986137/79‑1 (MQ=255) aacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc > 1:606150‑M2/78‑86 (MQ=255) aacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc < 2:606150‑M2/9‑1 (MQ=255) aacaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAAtttt > 2:537198‑M2/78‑139 (MQ=255) acaatatgaagcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTa < 2:1053643‑M2/63‑1 (MQ=255) agcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc < 1:1029489‑M2/40‑1 (MQ=255) agcaaaaacaggtattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc > 2:1029489‑M2/68‑107 (MQ=255) tattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc > 1:715853‑M2/56‑64 (MQ=255) tattaaagagactttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGcc < 2:715853‑M2/9‑1 (MQ=255) actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGata < 1:1010473‑M2/29‑1 (MQ=255) actttttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGata > 2:1010473‑M2/46‑74 (MQ=255) tttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa > 1:262928‑M2/42‑122 (MQ=255) tttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa < 2:262928‑M2/81‑1 (MQ=255) ttacgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTCAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTgg > 2:961886‑M2/41‑139 (MQ=255) cgtttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGAt < 2:1210309‑M2/102‑1 (MQ=255) ttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGat > 2:582422‑M2/35‑62 (MQ=255) ttgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGat < 1:582422‑M2/28‑1 (MQ=255) tgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc < 2:737577‑M2/40‑1 (MQ=255) tgtaaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc > 1:737577‑M2/34‑73 (MQ=255) taaaccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGt < 1:318258‑M2/108‑1 (MQ=255) ccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc < 1:971059‑M2/40‑1 (MQ=255) ccatcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc > 2:971059‑M2/28‑67 (MQ=255) tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGAt > 2:1460710‑M2/25‑126 (MQ=255) tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGAt < 1:1460710‑M2/102‑1 (MQ=255) tcacaaggagcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACAttt > 1:1248723‑M2/25‑139 (MQ=255) agcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCg < 2:671902‑M2/76‑1 (MQ=255) agcaggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCg > 1:671902‑M2/17‑92 (MQ=255) caggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc > 2:56804‑M2/15‑110 (MQ=255) caggacagtgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc < 1:56804‑M2/96‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGatatat < 2:803701‑M2/32‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGatatat > 1:803701‑M2/7‑38 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc < 1:1172604‑M2/40‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATc > 2:1172604‑M2/7‑46 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTa > 2:339497‑M2/7‑69 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTa < 1:339497‑M2/63‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCg > 2:168111‑M2/7‑82 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCg < 1:168111‑M2/76‑1 (MQ=255) tgctgaCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc > 1:1093034‑M2/7‑139 (MQ=255) caGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAt < 2:1248723/139‑1 (MQ=255) | TTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAT > NC_000913/3742501‑3742771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |