| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,490,116 | Δ11 bp | intergenic (‑53/+15) | yjgR ← / ← idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4490116 | 4490126 | 11 | 65 [0] | [0] 67 | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4490115 | 0 (0.000) | 65 (1.130) | 47/202 | 0.1 | 100% | intergenic (‑52/+26) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding |
| ? | NC_000913 | 4490127 = | 0 (0.000) | intergenic (‑64/+14) | yjgR/idnR | DUF853 family protein with NTPase fold/transcriptional repressor, 5‑gluconate‑binding | |||||
TAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAATACGTGTAATGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATC > NC_000913/4489979‑4490251 | tAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAga < 1:344686‑M1/139‑3 (MQ=255) aGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGAGATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagaga < 2:992832‑M1/139‑8 (MQ=255) cccATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaa < 2:434124‑M1/139‑10 (MQ=255) aTGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaata > 1:1381188‑M1/1‑127 (MQ=255) aTTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgt > 2:254573‑M1/1‑114 (MQ=255) tCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttg > 2:634477‑M1/1‑112 (MQ=255) cccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc < 1:254573‑M1/139‑29 (MQ=255) cccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc < 1:1394519‑M1/139‑29 (MQ=255) tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacc > 1:555411‑M1/1‑93 (MQ=255) tgtgTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctga < 2:1510232‑M1/133‑43 (MQ=255) tgtgTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctga > 1:1510232‑M1/1‑91 (MQ=255) tgtCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGGTATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgag > 1:267521‑M1/1‑89 (MQ=255) tgtCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgag < 2:555411‑M1/139‑51 (MQ=255) tgtCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgag < 2:598231‑M1/139‑51 (MQ=255) cGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatac > 2:1489363‑M1/1‑82 (MQ=255) cGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatac < 1:1489363‑M1/127‑46 (MQ=255) ggggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatc > 1:1336673‑M1/1‑65 (MQ=255) ggggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaa > 2:223191‑M1/1‑65 (MQ=255) ggggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaa < 1:223191‑M1/102‑38 (MQ=255) ggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgt > 2:1243485‑M1/1‑63 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtta > 1:812489‑M1/1‑61 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat < 2:561378‑M1/95‑35 (MQ=255) ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat > 1:561378‑M1/1‑61 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc < 2:1288016‑M1/87‑29 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc > 1:1288016‑M1/1‑59 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtg < 2:118814‑M1/83‑25 (MQ=255) cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtg > 1:118814‑M1/1‑59 (MQ=255) aTGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaa > 2:847946‑M1/1‑54 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctc > 1:811999‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa > 2:1305536‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 1:1305536‑M1/101‑56 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat > 1:1084577‑M1/1‑46 (MQ=255) tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgat < 2:1084577‑M1/80‑35 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa > 1:394301‑M1/1‑44 (MQ=255) ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 2:394301‑M1/99‑56 (MQ=255) aGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaac < 2:1336673‑M1/139‑100 (MQ=255) tttCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacat > 1:1389303‑M1/1‑38 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc > 2:1235578‑M1/1‑33 (MQ=255) tgcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgc < 1:1235578‑M1/61‑29 (MQ=255) gcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaat > 2:1060640‑M1/1‑32 (MQ=255) gcctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaat < 1:1060640‑M1/43‑12 (MQ=255) cctgGAGTATAGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg < 2:1381188‑M1/139‑109 (MQ=255) taGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccga > 1:432848‑M1/1‑22 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgac < 2:267521‑M1/139‑119 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatc < 2:374518‑M1/135‑115 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatc > 1:374518‑M1/1‑21 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg < 1:1055419‑M1/129‑109 (MQ=255) aGGCAACGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg > 2:1055419‑M1/1‑21 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaata > 1:280092‑M1/1‑16 (MQ=255) aCGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaata > 2:615838‑M1/1‑16 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatat > 2:1019338‑M1/1‑15 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag > 2:1232258‑M1/1‑15 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag < 1:1232258‑M1/73‑59 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag > 2:27794‑M1/1‑15 (MQ=255) cGTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacag < 1:27794‑M1/73‑59 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa < 2:337074‑M1/69‑56 (MQ=255) gTCCGGCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaa > 1:337074‑M1/1‑14 (MQ=255) cGGCAAAGAGAgaagagaaaataacttaaagcgtgttg < 2:1486385‑M1/38‑28 (MQ=255) cGGCAAAGAGAgaagagaaaataacttaaagcgtgttg > 1:1486385‑M1/1‑11 (MQ=255) ggCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaaaa < 2:1389303‑M1/139‑130 (MQ=255) gCAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaaaac > 1:353942‑M1/1‑9 (MQ=255) cAAAGAGAgaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaaaacg < 1:1019338‑M1/139‑132 (MQ=255) agagaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatcaaaacggggag > 2:1105209‑M1/1‑3 (MQ=255) agaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtt > 1:1413251‑M1/1‑1 (MQ=255) agaagagaaaataacttaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgtt < 2:1413251‑M1/78‑78 (MQ=255) | TAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAATACGTGTAATGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATC > NC_000913/4489979‑4490251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |