| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 75,447 | A→G | C12R (TGC→CGC) | thiB ← | thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 75,447 | 0 | A | G | 100.0% | 155.8 / NA | 43 | C12R (TGC→CGC) | thiB | thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (22/21); total (22/21) | |||||||||||
CGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGC > NC_000913/75313‑75579 | cgcCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCgcagc < 2:446336/139‑1 (MQ=255) aaGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCAcc < 2:891054/139‑1 (MQ=255) ggCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGcgca > 2:246627/1‑76 (MQ=255) cAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCgcagcaacagc > 1:1105305/1‑78 (MQ=255) cAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCgcagcaacagc < 2:1105305/78‑1 (MQ=255) cAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCaaaaagagt < 1:236855/120‑5 (MQ=255) cAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCaaaaagagt > 2:236855/1‑116 (MQ=255) cAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCaaaa < 2:1011919/115‑1 (MQ=255) cAGTCGGCGACGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCaaaa > 1:1011919/1‑115 (MQ=255) cggcggCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCa > 2:1391214/1‑103 (MQ=255) cggcggCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCa < 1:1391214/103‑1 (MQ=255) ggcggcGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCgcag > 1:1140947/1‑66 (MQ=255) ggcggcGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCgcag < 2:1140947/66‑1 (MQ=255) ggcggcGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCaaaa > 1:174263/1‑110 (MQ=255) ggcggcGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCaaaa < 2:174263/110‑1 (MQ=255) ggcggcGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGcc > 2:922998/1‑139 (MQ=255) aTCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCaa < 1:456312/109‑1 (MQ=255) aTCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCaa > 2:456312/1‑109 (MQ=255) ggTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTaa > 2:756396/1‑75 (MQ=255) ggTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTaa < 1:756396/75‑1 (MQ=255) ataAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGtt > 2:765948/1‑139 (MQ=255) tCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAAcagcag < 1:756822/46‑1 (MQ=255) tCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAAcagcag > 2:756822/1‑46 (MQ=255) tCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCaa < 1:1384332/92‑1 (MQ=255) tCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCaa > 2:1384332/1‑92 (MQ=255) tCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGa > 1:1334319/1‑96 (MQ=255) tCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGa < 2:1334319/96‑1 (MQ=255) tCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGAt > 2:629448/1‑139 (MQ=255) aaCGGGTTTAGCGAAAACGGGCGCTGTGCgcagcaacagc > 2:955460/1‑40 (MQ=255) aaCGGGTTTAGCGAAAACGGGCGCTGTGCgcagcaacagc < 1:955460/40‑1 (MQ=38) aaCGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGc > 2:1469069/1‑120 (MQ=255) aaCGGGTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGc < 1:1469069/120‑1 (MQ=255) ggTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAagag > 2:1182257/1‑78 (MQ=255) ggTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAagag < 1:1182257/78‑1 (MQ=255) ggTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCaa > 1:878791/1‑84 (MQ=255) ggTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCaa < 2:878791/84‑1 (MQ=255) ggTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAgg > 2:26317/1‑87 (MQ=255) ggTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAgg < 1:26317/87‑1 (MQ=255) ggTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCg > 1:894616/1‑121 (MQ=255) ggTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCg < 2:894616/121‑1 (MQ=255) gTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACATTTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAgg < 2:56480/98‑1 (MQ=255) gTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACATTTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAgg > 1:56480/1‑98 (MQ=255) gTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGTACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGa > 2:1115797/1‑139 (MQ=255) gTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAgg > 2:69065/1‑86 (MQ=255) gTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAgg < 1:69065/86‑1 (MQ=255) gTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAAt > 1:1505090/1‑107 (MQ=255) gTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAAt < 2:1505090/107‑1 (MQ=255) gTTTAGCGAAAACGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGa < 1:629448/139‑1 (MQ=255) aaCGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAag < 2:879843/65‑1 (MQ=255) aaCGGGCGCTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAag > 1:879843/1‑65 (MQ=255) cTGTGCGCAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAgcgc < 1:765948/139‑1 (MQ=255) | CGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACA‑TTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGC > NC_000913/75313‑75579 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |