| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,328,103 | A→C | intergenic (+20/+136) | yhbY → / ← greA | RNA binding protein associated with pre‑50S ribosomal subunits/transcript cleavage factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,328,103 | 0 | A | C | 100.0% | 164.4 / NA | 46 | intergenic (+20/+136) | yhbY/greA | RNA binding protein associated with pre‑50S ribosomal subunits/transcript cleavage factor |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (20/26); total (20/26) | |||||||||||
CCTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACACATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGG > NC_000913/3327968‑3328232 | ccTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCAt < 2:744686/139‑1 (MQ=255)ccTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCAt < 1:787057/139‑1 (MQ=255) tCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTGATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCtg < 2:1280470/139‑1 (MQ=255) tGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTg > 1:741433/1‑133 (MQ=255) tGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTg < 2:741433/133‑1 (MQ=255) tGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGt < 1:239145/139‑1 (MQ=255) gAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTcc < 1:1396703/139‑1 (MQ=255) tGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCaaa < 2:333229/139‑1 (MQ=255) cAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGc > 2:710757/1‑96 (MQ=255) cAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGc < 1:710757/96‑1 (MQ=255) aGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGcc > 2:1427122/1‑139 (MQ=255) gTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCAc > 2:1373849/1‑139 (MQ=255) gTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCAc > 1:93344/1‑139 (MQ=255) tCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTCAAGAACGTAAAATCTCGCTGCCACGCTTAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACg < 1:909463/139‑1 (MQ=255) aTCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGct < 1:831709/139‑1 (MQ=255) aaaCGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCg > 2:1191669/1‑139 (MQ=255) tGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATa > 2:600721/1‑139 (MQ=255) ggTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATaa < 1:1427122/139‑1 (MQ=255) gTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATaaa < 2:93344/139‑1 (MQ=255) cAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCg < 1:600721/139‑1 (MQ=255) cGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCaaa < 1:518640/90‑1 (MQ=255) cGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCaaa > 2:518640/1‑90 (MQ=255) tAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGtttt < 1:1411923/69‑1 (MQ=255) tAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGtttt > 2:1411923/1‑69 (MQ=255) tAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCcttt < 1:1191669/139‑1 (MQ=255) cGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGt > 1:297769/1‑94 (MQ=255) cGCTGCCACGCTAAGATTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGt < 2:297769/94‑1 (MQ=255) aTTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCa < 1:166378/71‑1 (MQ=255) aTTATCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCa > 2:166378/1‑71 (MQ=255) tCCTAAAGTTACACCCATTTGCTGTGTAAAACGAg < 1:65693/35‑1 (MQ=38) tCCTAAAGTTACACCCATTTGCTGTGTAAAACGAg > 2:65693/1‑35 (MQ=38) tCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCGAAATGcc < 2:331693/66‑1 (MQ=255) tCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGcc > 1:661606/1‑66 (MQ=255) tCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGcc < 2:661606/66‑1 (MQ=255) tCCTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGcc > 1:331693/1‑66 (MQ=255) ccTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCgcagg > 1:1297117/1‑48 (MQ=255) ccTAAAGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCgcagg < 2:1297117/48‑1 (MQ=255) aaaGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATa < 1:185408/118‑1 (MQ=255) aaaGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATa > 2:185408/1‑118 (MQ=255) aaaGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTgg < 1:1373849/139‑1 (MQ=255) aaGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTggg > 2:859044/1‑139 (MQ=255) aaGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTggg > 1:658167/1‑139 (MQ=255) aGTTACTCCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGga < 1:927440/48‑1 (MQ=255) aGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGga > 2:927440/1‑48 (MQ=255) aGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGctc > 2:204359/1‑66 (MQ=255) aGTTACACCCATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGctc < 1:204359/66‑1 (MQ=255) | CCTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAAGATTATCCTAAAGTTACACACATTTGCTGTGTAAAACGAGGGGTTTTCCGCAGGCAGGAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATAGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGG > NC_000913/3327968‑3328232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |