Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,006,491 C→T V180V (GTC→GTT
*370* (TAG→TAA
zapC →
ycbX ←
FtsZ stabilizer
6‑N‑hydroxylaminopurine detoxification oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,006,4910CT100.0% 135.2 / NA 42V180V (GTC→GTT
*370* (TAG→TAA
zapC
ycbX
FtsZ stabilizer
6‑N‑hydroxylaminopurine detoxification oxidoreductase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (22/20);  total (22/20)

CACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGC  >  NC_000913/1006373‑1006624
                                                                                                                      |                                                                                                                                     
cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCa                                                                                                                  <  2:792527/139‑1 (MQ=255)
  caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGt                                                                                                                <  2:1263154/139‑1 (MQ=255)
               ttATTGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg                                                                                                   >  1:468421/1‑139 (MQ=255)
                  ttGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa                                                                                                <  2:40127/139‑1 (MQ=255)
                  ttGCGGGTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa                                                                                                <  2:1059367/139‑1 (MQ=255)
                       ggTCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa                                                                                           >  1:962978/1‑139 (MQ=255)
                         tCGCGCGATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa                                                                                         >  2:535316/1‑139 (MQ=255)
                          cgcgcgATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGc                                                                                                                   <  1:914617/112‑1 (MQ=255)
                          cgcgcgATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGc                                                                                                                   >  2:914617/1‑112 (MQ=255)
                            cgcgATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa                                                                                                >  2:935233/1‑129 (MQ=255)
                            cgcgATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa                                                                                                <  1:935233/129‑1 (MQ=255)
                            cgcgATGCAGTTGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa                                                                                      >  1:829973/1‑139 (MQ=255)
                                            gACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGc                                                                                >  2:1014978/1‑130 (MQ=255)
                                            gACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGc                                                                                <  1:1014978/130‑1 (MQ=255)
                                            gACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatca                                                                           >  1:64930/1‑135 (MQ=255)
                                            gACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatca                                                                           <  2:64930/135‑1 (MQ=255)
                                            gACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc                                                                       >  1:298757/1‑139 (MQ=255)
                                                 cATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCt                                                                                                 >  1:330804/1‑108 (MQ=255)
                                                 cATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCt                                                                                                 <  2:330804/108‑1 (MQ=255)
                                                  aTTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTg                                                                 <  2:962978/139‑1 (MQ=255)
                                                           aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGcc                                                                                                                              >  2:1313714/1‑69 (MQ=255)
                                                           aTGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGcc                                                                                                                              <  1:1313714/69‑1 (MQ=255)
                                                                   cAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGt                                                                                                                     <  1:790857/70‑1 (MQ=255)
                                                                   cAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGt                                                                                                                     >  2:790857/1‑70 (MQ=255)
                                                                     ggCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGt                                              >  2:1149951/1‑139 (MQ=255)
                                                                     ggCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGt                                              >  1:48550/1‑139 (MQ=255)
                                                                             ccGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGc                                      <  2:468421/139‑1 (MQ=255)
                                                                                cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCtt                                   >  2:1042687/1‑139 (MQ=255)
                                                                                        tGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa                                                                                           >  2:1060586/1‑75 (MQ=255)
                                                                                        tGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa                                                                                           <  1:1060586/75‑1 (MQ=255)
                                                                                            gACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGaa                       <  1:535316/139‑1 (MQ=255)
                                                                                             aCAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTaa                                                                                                                       >  2:301186/1‑42 (MQ=255)
                                                                                             aCAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTaa                                                                                                                       <  1:301186/42‑1 (MQ=255)
                                                                                             aCAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGt                                                                                                                <  2:645452/49‑1 (MQ=255)
                                                                                             aCAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGt                                                                                                                >  1:645452/1‑49 (MQ=255)
                                                                                              cAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGa                                                                                       <  2:390219/73‑1 (MQ=255)
                                                                                              cAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGa                                                                                       >  1:390219/1‑73 (MQ=255)
                                                                                                  ttCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTa                                                                                                        >  1:847231/1‑52 (MQ=255)
                                                                                                  ttCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTa                                                                                                        <  2:847231/52‑1 (MQ=255)
                                                                                                            aaCAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTc                                                      >  2:1294965/1‑92 (MQ=255)
                                                                                                            aaCAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTc                                                      <  1:1294965/92‑1 (MQ=255)
                                                                                                                 gCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGc  >  1:733401/1‑139 (MQ=255)
                                                                                                                      |                                                                                                                                     
CACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGC  >  NC_000913/1006373‑1006624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: