New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1050326 =	7 (0.100)	6 (0.090)	5/216	6.0	11.7%	noncoding (549/768 nt)	IS1	repeat region
	?	NC_000913	= 4519016	84 (1.220)					noncoding (545/768 nt)	IS1	repeat region
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATC‑‑‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1050464‑1050326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cATCTATACCACGACCTCAAAGGCCGACAGCAGGCTCAGAAGACGCTCCAGTGT  <  NC_000913/4519016‑4518964                                                                                                                                                                                                     GAACGACAGCGACTTCCGTCCCAGCCGTGTCAGGTGCTGCCTCAGATTCAGGTTATACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATC‑‑‑C                                                       <  1:795409/139‑1                              CCAGGTGCTGCCTCAGATTCAGGTTATACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATCCGTCATTTATACCACGACCTCAAAGGCCac                             >  1:1022211/1‑137                                   TGCTGCCTCAGATTCAGGTTATACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATCCGTCATTTATACCACGACCTCAAAGGCC‑ACAGCAG                       <  2:95734/139‑1                                           CAGATTCAGGTTATACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTCCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATCCGTCATTTATACCACGACCTCAAAGGCC‑ACAGCAGGCTCAGAA               <  1:1462049/139‑1                                                       ATACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATCCGTCATTTATACCACGACCTCAAAGGCC‑ACAGCAGGCTCAGAAGACGCTCCAGcg   <  2:1022211/139‑3                                                        TACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATCCGTCATTTATACCACGACCTCAAAGGCC‑ACAGCAGGCTCAGAAGACGCTCCAGCGT  >  2:1111593/1‑139                                                        TACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATCCGTCATTTATACCACGACCTCAAAGGCC‑ACAGCAGGCTCAGAAGACGCTCCAGCGT  <  2:464704/139‑1                                                                                     GCTGATTACGTGCAGCTTTCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATC‑‑‑C                                                       >  1:477834/1‑55                                                                                     GCTGATTACGTGCAGCTTTCCCTTCAGGCGTGATTCATACAGCGGCCAGCCATC‑‑‑C                                                       <  2:477834/55‑1                                                                                                                                                                                                     GAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATACCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATC‑‑‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1050464‑1050326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cATCTATACCACGACCTCAAAGGCCGACAGCAGGCTCAGAAGACGCTCCAGTGT  <  NC_000913/4519016‑4518964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.