| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,525,917 | Δ9 bp | intergenic (+26/+5) | yfeN → / ← yfeR | putative outer membrane protein/transcriptional regulator of yefH |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2525917 | 2525925 | 9 | 77 [0] | [0] 66 | yfeN/yfeR | putative outer membrane protein/transcriptional regulator of yefH |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2525916 | 0 (0.000) | 66 (0.950) | 43/218 | 0.4 | 100% | intergenic (+25/+14) | yfeN/yfeR | putative outer membrane protein/transcriptional regulator of yefH |
| ? | NC_000913 | 2525926 = | 0 (0.000) | intergenic (+35/+4) | yfeN/yfeR | putative outer membrane protein/transcriptional regulator of yefH | |||||
TGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCA > NC_000913/2525778‑2526045 | tggAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa < 1:1060107/139‑1 (MQ=255)tggAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa < 1:709305/139‑1 (MQ=255)tggAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa < 2:63962/139‑1 (MQ=255) tGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa < 1:274359/134‑1 (MQ=255) tGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa > 2:274359/1‑134 (MQ=255) gCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcacttt < 1:1234169‑M1/139‑7 (MQ=255) cAACATCACAGATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcacttt > 1:1072457‑M1/1‑133 (MQ=255) cAACATCACACATTAGTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcacttt < 2:1072457‑M1/139‑7 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcacttta > 2:505284‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcacttta > 2:107166‑M1/1‑132 (MQ=255) cacacaTTACTAC‑GGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctga < 2:639328‑M1/139‑15 (MQ=255) caTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatac < 1:1123064‑M1/139‑18 (MQ=255) caTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatac < 2:769061‑M1/139‑18 (MQ=255) tCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcc > 2:1535023‑M1/1‑107 (MQ=255) atatGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagcc > 1:566451‑M1/1‑98 (MQ=255) cGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattag > 2:278324‑M1/1‑93 (MQ=255) cGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattag > 1:352167‑M1/1‑93 (MQ=255) gATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcact < 2:1490366‑M1/95‑5 (MQ=255) gATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcact > 1:1490366‑M1/1‑91 (MQ=255) tGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgca < 1:278324‑M1/139‑51 (MQ=255) gACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa < 2:784815/88‑1 (MQ=255) gACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa > 1:784815/1‑88 (MQ=255) gACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcat > 2:404576‑M1/1‑88 (MQ=255) gACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcat > 1:644168‑M1/1‑88 (MQ=255) aCTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccc < 2:823701‑M1/139‑57 (MQ=255) aCTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccc < 1:107166‑M1/139‑57 (MQ=255) aCTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccc < 1:1535023‑M1/139‑57 (MQ=255) tGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctg < 2:21542‑M1/139‑59 (MQ=255) gggCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatat > 2:773522‑M1/1‑80 (MQ=255) gggCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatat < 1:773522‑M1/90‑11 (MQ=255) cGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagc > 1:634340‑M1/1‑57 (MQ=255) cGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctg < 1:911291‑M1/115‑59 (MQ=255) cGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctg > 2:911291‑M1/1‑57 (MQ=255) cGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatcc > 1:679982‑M1/1‑57 (MQ=255) cGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatcc < 2:679982‑M1/83‑27 (MQ=255) tCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccacccagccattagcgcattgccctggtctcg > 2:203720‑M1/1‑51 (MQ=255) tCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccacccagccattagcgcattgccctggtctcg < 1:203720‑M1/115‑65 (MQ=255) cTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttata < 1:1112982‑M1/59‑10 (MQ=255) cTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttata > 2:1112982‑M1/1‑50 (MQ=255) tACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcgg < 1:505284‑M1/139‑91 (MQ=255) cTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa < 1:193928/47‑1 (MQ=255) cTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa > 2:193928/1‑47 (MQ=255) cATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtg > 2:173823‑M1/1‑44 (MQ=255) cATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtg > 1:166339‑M1/1‑44 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa > 1:1196420/1‑42 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCa < 2:1196420/42‑1 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtgga > 2:1358837‑M1/1‑42 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtgga > 2:325300‑M1/1‑42 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtgga > 2:388806‑M1/1‑42 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtgga > 2:686724‑M1/1‑42 (MQ=255) tttAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtg < 1:325300‑M1/139‑103 (MQ=255) ttAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtga < 1:173823‑M1/139‑104 (MQ=255) ttAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtga < 1:1358837‑M1/139‑104 (MQ=255) aaCTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatc > 2:1517039‑M1/1‑34 (MQ=255) aaCTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatc < 1:1517039‑M1/45‑12 (MQ=255) aCTTCTGATTGATTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacg < 1:388806‑M1/139‑107 (MQ=255) tgattgatTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccc > 1:109027‑M1/1‑28 (MQ=255) tgattgatTACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccc < 2:109027‑M1/84‑57 (MQ=255) gattACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctg < 2:634340‑M1/139‑117 (MQ=255) ttACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcg > 2:1241514‑M1/1‑21 (MQ=255) ttACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggt < 2:991231‑M1/129‑109 (MQ=255) ttACTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggt > 1:991231‑M1/1‑21 (MQ=255) aCTGCCGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgca > 2:1164888‑M1/1‑19 (MQ=255) ccGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccat > 2:1168022‑M1/1‑15 (MQ=255) ccGGGGCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccat < 1:1168022‑M1/58‑44 (MQ=255) gggCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcaccagcat > 2:71942‑M1/1‑12 (MQ=255) gggCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgca < 2:821947‑M1/62‑51 (MQ=255) gggCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgca > 1:821947‑M1/1‑12 (MQ=255) gCTCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctagtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcaccagcatca > 2:1003789‑M1/1‑10 (MQ=255) tCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccc > 1:1456587‑M1/1‑8 (MQ=255) tCCCGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccc < 2:1456587‑M1/64‑57 (MQ=255) cccGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcag < 1:983780‑M1/94‑88 (MQ=255) cccGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcag > 2:983780‑M1/1‑7 (MQ=255) cccGGCAcactttatatctgatacaacggatccccttcccgccc > 1:121788‑M1/1‑7 (MQ=255) cccGGCAcactttatatctgatacaacggatccccttcccgccc < 2:121788‑M1/44‑38 (MQ=255) cGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaa > 2:644255‑M1/1‑5 (MQ=255) cGGCAcactttatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaa < 1:644255‑M1/109‑105 (MQ=255) | TGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCA‑GGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCA > NC_000913/2525778‑2526045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |