Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,682,677	T→C	I23M (ATA→ATG)	yphG ←	DUF4380 domain‑containing TPR repeat protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,682,677	0	T	C	100.0%	325.9 / NA	91	I23M (ATA→ATG)	yphG	DUF4380 domain‑containing TPR repeat protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (44/47);  total (44/47)

ATGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGT  >  NC_000913/2682543‑2682795                                                                                                                                       |                                                                                                                       aTGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCatat                                                                                                                    >  2:957744/1‑139 (MQ=255)     aGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTg                                                                                                                >  1:296042/1‑139 (MQ=255)       tCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCTCGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCg                                                                                                              >  2:852201/1‑139 (MQ=255)       tCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCg                                                                                                              >  2:1510280/1‑139 (MQ=255)          ttttCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGcc                                                                                                           <  2:296042/139‑1 (MQ=255)           tttCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGccc                                                                                                          >  2:456072/1‑139 (MQ=255)           tttCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGccc                                                                                                          >  1:488277/1‑139 (MQ=255)            ttCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGcc                                                                                                           >  2:172113/1‑137 (MQ=255)            ttCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGcc                                                                                                           <  1:172113/137‑1 (MQ=255)            ttCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCg                                                                                                         <  2:488277/139‑1 (MQ=255)                 gCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGcc                                                                                                           >  2:744681/1‑132 (MQ=255)                 gCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGcc                                                                                                           <  1:744681/132‑1 (MQ=255)                     cacCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAg                                                                                                >  1:908732/1‑139 (MQ=255)                     cacCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAg                                                                                                >  2:1589671/1‑139 (MQ=255)                       ccGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGt                                                                                              <  2:1057858/139‑1 (MQ=255)                          ccTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCgg                                                                                           >  2:1382186/1‑139 (MQ=255)                                    tttCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAAcg                                                                                 <  2:822706/139‑1 (MQ=255)                                       cAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACgcgc                                                                              <  1:1031778/139‑1 (MQ=255)                                       cAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACgcgc                                                                              >  2:652196/1‑139 (MQ=255)                                            ttttCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTg                                                                         >  1:1564867/1‑139 (MQ=255)                                             tttCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGct                                                                             >  1:157907/1‑134 (MQ=255)                                             tttCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGct                                                                             <  2:157907/134‑1 (MQ=255)                                             tttCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGc                                                                        <  1:21883/139‑1 (MQ=255)                                                  gctcgctcAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCacac                                                                   <  1:1510280/139‑1 (MQ=255)                                                  gctcgctcAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCacac                                                                   <  1:852201/139‑1 (MQ=255)                                                            cGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGa                                                         <  1:652196/139‑1 (MQ=255)                                                                tCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCa                                                     >  1:126873/1‑139 (MQ=255)                                                                tCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCa                                                     >  1:480661/1‑139 (MQ=255)                                                                    tCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGt                                                 <  2:1114597/139‑1 (MQ=255)                                                                    tCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGt                                                 >  1:1114597/1‑139 (MQ=255)                                                                      aCGCCGTAGGGATAAACCGCGCCGGAAGATCATTGATAAACGCGATTTTCCAGGAAAATGGCATACATATCCTCTGGCCCGGAATCTTAGGGCGCGGAATAAACGCGCTCTAGCAACAATTTTATTCAAGTCATgaagc                                               >  1:755826/1‑135 (MQ=255)                                                                        tccGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGTATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             <  2:755826/138‑1 (MQ=255)                                                                        gCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGTTTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             <  1:1335648/139‑1 (MQ=255)                                                                        gCCGTAGGGATAAACCGCGCCGAACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             <  1:645106/139‑1 (MQ=255)                                                                         ccGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGc                                                                                                            <  2:885899/75‑1 (MQ=255)                                                                         ccGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGc                                                                                                            >  1:885899/1‑75 (MQ=255)                                                                         ccGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCt                                            <  2:908732/139‑1 (MQ=255)                                                                         ccGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCt                                            >  2:1138083/1‑139 (MQ=255)                                                                             aGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACGCTTTTACTGGAGTCATGGTGCCCTCAat                                        <  1:110548/139‑1 (MQ=255)                                                                             aGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAat                                        <  1:1138083/139‑1 (MQ=255)                                                                                 aTAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTa                                    <  1:19016/139‑1 (MQ=255)                                                                                 aTAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTa                                    <  2:480661/139‑1 (MQ=255)                                                                                    aaCCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTAc                                                             >  1:310033/1‑111 (MQ=255)                                                                                    aaCCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTAc                                                             <  2:310033/111‑1 (MQ=255)                                                                                    aaCCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATg                                                   >  2:518346/1‑121 (MQ=255)                                                                                    aaCCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATg                                                   <  1:518346/121‑1 (MQ=255)                                                                                      ccGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGt                                                                                              >  1:661696/1‑76 (MQ=255)                                                                                      ccGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGt                                                                                              <  2:661696/76‑1 (MQ=255)                                                                                      ccGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAg                               <  1:957744/139‑1 (MQ=255)                                                                                      ccGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAg                               <  1:1382186/139‑1 (MQ=255)                                                                                         cgcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGAtc                                                                                       <  2:80002/80‑1 (MQ=255)                                                                                         cgcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACa                            >  1:1229107/1‑139 (MQ=255)                                                                                         cgcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATACTGCGGCCCGGTTTCATAGGTCGGGAtc                                                                                       >  1:80002/1‑80 (MQ=255)                                                                                          gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATTGGATGCATATCCTTCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGcc                                              >  1:357566/1‑120 (MQ=255)                                                                                          gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTa                                                              >  1:1187112/1‑104 (MQ=255)                                                                                          gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTa                                                              <  2:1187112/104‑1 (MQ=255)                                                                                          gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATg                                                   <  2:1512668/115‑1 (MQ=255)                                                                                          gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATg                                                   >  1:1512668/1‑115 (MQ=255)                                                                                          gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGcc                                              <  2:357566/120‑1 (MQ=255)                                                                                          gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACAt                           >  1:815952/1‑139 (MQ=255)                                                                                           ccGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATa                          <  2:1229107/139‑1 (MQ=255)                                                                                              gACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAat                                        <  1:416994/122‑1 (MQ=255)                                                                                              gACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAat                                        >  2:416994/1‑122 (MQ=255)                                                                                                       tGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTc                                                                                             >  1:1532560/1‑60 (MQ=255)                                                                                                       tGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTc                                                                                             <  2:1532560/60‑1 (MQ=255)                                                                                                         aTAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGAt            >  2:763551/1‑139 (MQ=255)                                                                                                            aaCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtg         <  1:456072/139‑1 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCca                                                                      <  2:1528222/77‑1 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCca                                                                      >  1:1528222/1‑77 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCAGACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtgt        >  1:1018770/1‑139 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTAc                                                             <  2:141571/86‑1 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTAc                                                             >  1:141571/1‑86 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             <  2:284912/102‑1 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             >  1:284912/1‑102 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAat                                        <  2:381323/107‑1 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAat                                        >  1:381323/1‑107 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGa                      >  1:5731/1‑125 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGa                      <  2:5731/125‑1 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtgt        >  1:448260/1‑139 (MQ=255)                                                                                                             aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtgt        >  1:768861/1‑139 (MQ=255)                                                                                                              cgcgATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             <  2:1103449/101‑1 (MQ=255)                                                                                                              cgcgATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             >  1:1103449/1‑101 (MQ=255)                                                                                                              cgcgATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             <  1:1571988/101‑1 (MQ=255)                                                                                                              cgcgATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc                                             >  2:1571988/1‑101 (MQ=255)                                                                                                              cgcgATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtgtg       >  2:544316/1‑139 (MQ=255)                                                                                                                 gATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCa    <  2:1564867/139‑1 (MQ=255)                                                                                                                 gATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCa    <  2:448260/139‑1 (MQ=255)                                                                                                                   ttttCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAgt  <  2:745096/139‑1 (MQ=255)                                                                                                                   ttttCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAgt  <  2:1150679/139‑1 (MQ=255)                                                                                                                                tGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCt                                            <  2:343805/84‑1 (MQ=255)                                                                                                                                tGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCt                                            >  1:343805/1‑84 (MQ=255)                                                                                                                                       |                                                                                                                       ATGTAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGT  >  NC_000913/2682543‑2682795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑