| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,682,677 | T→C | I23M (ATA→ATG) | yphG ← | DUF4380 domain‑containing TPR repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,682,677 | 0 | T | C | 100.0% | 105.3 / NA | 30 | I23M (ATA→ATG) | yphG | DUF4380 domain‑containing TPR repeat protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (11/19); total (11/19) | |||||||||||
TAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCA > NC_000913/2682546‑2682793 | tAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGCACATGGGATGCATATCCt < 2:427139/139‑1 (MQ=255) tCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCg > 1:10989/1‑139 (MQ=255) ccACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCa < 2:390477/139‑1 (MQ=255) cacaCCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCAt < 1:750019/139‑1 (MQ=255) acCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAgg > 1:176847/1‑139 (MQ=255) tGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGa > 1:76024/1‑139 (MQ=255) ccAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGAtc < 1:695588/139‑1 (MQ=255) gctcgctcAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCacac < 2:108131/139‑1 (MQ=255) tCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGt < 1:527098/139‑1 (MQ=255) tAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGAtc < 1:224240/87‑1 (MQ=255) tAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGAtc > 2:224240/1‑87 (MQ=255) ccGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCca < 2:727068/100‑1 (MQ=255) ccGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCca > 1:727068/1‑100 (MQ=255) ccGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAg < 2:400555/139‑1 (MQ=255) cgcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAat > 1:679635/1‑127 (MQ=255) cgcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAat < 2:679635/127‑1 (MQ=255) cgcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACa > 2:157909/1‑139 (MQ=255) gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCTGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACAt < 2:101776/139‑1 (MQ=255) gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACttt < 2:698475/102‑1 (MQ=255) gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACttt > 1:698475/1‑102 (MQ=255) aTAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAAt < 2:256991/131‑1 (MQ=255) aTAAACGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAAt > 1:256991/1‑131 (MQ=255) aaCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCTACGCGCTCGTGCCACGCTTTTACTGTAGTCATGGTGCCCTCAATTTTAGCAAGACATACGGAATTAAAAGATTtg < 2:176847/139‑1 (MQ=255) aaCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtg < 2:447467/139‑1 (MQ=255) aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTg > 2:275882/1‑88 (MQ=255) aCGCGATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTg < 1:275882/88‑1 (MQ=255) gcgATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTgg < 1:323036/139‑1 (MQ=255) gATTTTCCAGGAACATGGGATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCa < 2:10989/139‑1 (MQ=255) gggATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGctc < 1:621091/51‑1 (MQ=255) gggATGCATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGctc > 2:621091/1‑51 (MQ=255) | TAGTCGTTTTCCAGCCACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCA > NC_000913/2682546‑2682793 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |