| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,067,224 | C→T | intergenic (‑30/+16) | yihP ← / ← yihQ | putative 2,3‑dihydroxypropane‑1‑sulphonate exporter, membrane protein/putative sulpholipid alpha‑glucosidase, alpha‑glucosyl fluoride glucosidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,067,224 | 0 | C | T | 100.0% | 120.0 / NA | 39 | intergenic (‑30/+16) | yihP/yihQ | putative 2,3‑dihydroxypropane‑1‑sulphonate exporter, membrane protein/putative sulpholipid alpha‑glucosidase, alpha‑glucosyl fluoride glucosidase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (23/16); total (23/16) | |||||||||||
TATCCAGCAGGATGTTAGAGGCCAGGTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCCCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTC > NC_000913/4067092‑4067353 | tatCCAGCAGGATGTTAGAGGCCAGGTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACggg < 2:391552/139‑1 (MQ=255) tCCAGCAGGATGTTAGAGGCCAGGTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCg > 1:236965/1‑139 (MQ=255) ccAGCAGGATGTTAGAGGCCAGGTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCgg < 1:182625/139‑1 (MQ=255) agcagGATGTTAGAGGCCAGGTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGAt < 2:53002/139‑1 (MQ=255) ttAGAGGCCAGGTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGCGCGGATGTGATTAGa < 2:515236/139‑1 (MQ=255) gCCAGGTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCttt > 2:165093/1‑139 (MQ=255) ggTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTCGATGCTTTTTaa > 2:614051/1‑139 (MQ=255) ggTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTaa > 2:266823/1‑139 (MQ=255) ggTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTaa > 1:564207/1‑139 (MQ=255) gTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGTTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAac < 1:581312/139‑1 (MQ=255) gTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAac < 2:236965/139‑1 (MQ=255) cGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAg > 2:484041/1‑139 (MQ=255) cagTTTCGCTTTAAAGGGCAGGCGTAAAGTCATTGGATTGGCCGTTGTGATGTGACTCATCGATGTTCACCCTTTGCCCATGAGTTTACTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTgccggc < 2:222159/138‑3 (MQ=255) actttCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATGTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGCGGTGATCAGATGCTTCTTAACGACGCGAACAGTCCTGccc > 2:681109/3‑139 (MQ=255) tttCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCAt > 2:8349/1‑139 (MQ=255) ttCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCAtt < 1:484041/139‑1 (MQ=255) gCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACggg > 2:674567/1‑65 (MQ=255) gCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACggg < 1:674567/65‑1 (MQ=255) ttCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTgc > 2:426691/1‑96 (MQ=255) ttCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTgc < 1:426691/96‑1 (MQ=255) cGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATg > 1:69388/1‑139 (MQ=255) tgatgtgaCTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACggg > 1:711097/1‑49 (MQ=255) tgatgtgaCTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACggg < 2:711097/49‑1 (MQ=255) atgtgaCTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCAt > 2:667930/1‑139 (MQ=255) tCATCGATGTTCTCCCTTTGCCCATGAGTTCCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGt < 1:266823/139‑1 (MQ=255) cATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACggg > 1:231636/1‑39 (MQ=255) cATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACggg < 2:231636/39‑1 (MQ=255) cATCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTa > 1:275281/1‑139 (MQ=255) tCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAAc > 2:356964/1‑139 (MQ=255) tCGATGTTCTCCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAAc > 1:655799/1‑139 (MQ=255) tctcCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTccccg > 1:760244/1‑139 (MQ=255) tcCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGaa > 2:51535/1‑61 (MQ=255) tcCCTTTGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGaa < 1:51535/61‑1 (MQ=255) ttGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTgccgc < 2:235626/65‑1 (MQ=255) ttGCCCATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTgccgc > 1:235626/1‑65 (MQ=255) cATGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCt > 2:87997/1‑139 (MQ=255) tGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCAtt > 2:561221/1‑109 (MQ=255) tGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCAtt < 1:561221/109‑1 (MQ=255) tGAGTTTCCTCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTc > 2:365443/1‑139 (MQ=255) | TATCCAGCAGGATGTTAGAGGCCAGGTCGCCAATACCGTAAGAGAGTTTCTCTTTAAAGGGCAGGCGTAAAGTTGCTGGATCTTCCGTTGTGATGTGACTCATCGATGTTCTCCCTTTGCCCATGAGTTTCCCCACGGGCGGATGTGATTAGATGCTTTTTAACGACGCGAACAGTGCCGCCCATTCGCTATCGGCGCGATAAAAGACCGGCGGCTTGCCGATGGGCGCATTAACGGTAACTTCCCCGCCCCGGAACGCTTC > NC_000913/4067092‑4067353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |