| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 380,022 | (G)10→11 | intergenic (‑141/+47) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,012 | 1 | . | G | 77.0% | 163.8 / 41.4 | 61 | intergenic (‑131/+57) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (7/7); new base G (31/16); total (38/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAC > NC_000913/379874‑380135 | cTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGa‑a‑a > 2:161007/1‑139 (MQ=255) tgcatgcaATATACTATGGGGGGGTATTCTATATGTCAATGAATACCCCCCTATAGTATATAACACTGGAGAAAAAAATTTATCCGGGGAATGTGGTCGGAAAACAAAGA‑GGA‑AGG‑‑‑GGGGGGGGGG‑‑CTAATCGGCAggg < 1:161007/139‑1 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAgg > 1:673618/1‑139 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGgc > 1:1296477/1‑139 (MQ=255) acagataCTATAGGGGGGTTTTCTATATGTCAAAGCATACCCCCCTATAGTATAAAACACTGGGGAATAAAATTTATCCGGTGAAGGTGGTCGGAAAACAAAGG‑GGA‑AGG‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGgcc < 1:26462/135‑1 (MQ=255) tataCTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGgccgcc > 1:1342099/1‑139 (MQ=255) aGGGGGGTATTTTATATGTCAAAGCATACCCCCCTATAGTAAATAACACTGGAGAATAAAAGTTATCCGGGGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAg < 2:1342099/139‑1 (MQ=255) acaggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACTCTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcg < 1:398805/136‑1 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CAAATCGGAAGGGAAGGCCGCCCCGGATAgctgt > 2:26462/1‑136 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑ggggggg > 2:827891/1‑101 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑ggggggg < 1:827891/101‑1 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑ggggg > 2:31316/1‑99 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAAAAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑ggggg < 1:31316/99‑1 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 1:734154/1‑139 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGC‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CGAATTGGCGGGGAAGGCGGCCCCGGATAGGGGGGGGCAGAAgctgt > 2:398805/1‑135 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAAGGGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGaa > 2:1400157/1‑139 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CAAATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCAGAAGGACTAAGaa > 2:382619/1‑139 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 2:1421041/1‑139 (MQ=255) aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑gggggg < 2:105430/77‑1 (MQ=255) aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑gggggg > 1:105430/1‑77 (MQ=255) ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCa > 2:310211/1‑139 (MQ=255) ccTATAGTATATAACACTGGGGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGa‑a‑a < 2:945764/66‑1 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGa‑a‑a > 1:945764/1‑66 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCCCCCCGGAAAGCGGGCGGCAGAAGGAATCAAAATTTCCAGGTc > 1:1027897/1‑139 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AGGGGGGGGGGGGG‑‑CTAATCGGCGGGGAAGGCCCCCCCGGATAGGGGGCGGCAAAAGGAAACAGAATTTCCAGGTAAGACg > 2:787722/1‑139 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 1:192871/1‑139 (MQ=255) tttaACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAgg < 1:1564855/83‑1 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAgg > 2:1564855/1‑85 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGTTAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 2:375825/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt < 1:310211/139‑1 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 1:81921/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTAAGACGGGCt > 2:960325/1‑139 (MQ=255) ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 2:1574222/139‑1 (MQ=255) taACACTGGAGAATAAAATTTATCCGGTGAATGTGGGCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 2:81921/139‑1 (MQ=255) taACACAGGAGAATAAAATTTATCCGGGGAATGTGGGCGGAAAATAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 2:673618/139‑1 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CAAATGGGCGGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAGGGAATAAGAATTTCCAGGTCAGCCGGGCTGCa > 1:1653936/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAgg < 2:1232134/80‑1 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAgg > 1:1232134/1‑80 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAg > 2:167073/1‑139 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACgg < 2:950343/128‑1 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATAAGAATTTCCGGGTCAGACgg > 1:950343/1‑128 (MQ=255) gggaAAAAAATTTATCCGGGCAATGTGTTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 1:382619/137‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AGG‑GGGGGGGGGG‑‑CTAATGGGCAGGGAAGgccgcc > 2:1617006/1‑81 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGCATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:1090478/1‑139 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa > 2:1532982/1‑109 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:821723/1‑139 (MQ=255) gagaATAAAATTTATCCGGGGAATGTGGTGGGAAAACAAAGA‑GGAGA‑G‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa < 1:1532982/109‑1 (MQ=255) gagaAAAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AGG‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGgccgcc < 1:1617006/81‑1 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑gggggggggggcta > 1:995952/1‑52 (MQ=255) tAAAATTTATCCGGTGAATGTGGGCGGAAAACAAAGA‑GGG‑A‑A‑‑‑gggggggggggcta < 2:995952/56‑5 (MQ=255) aaaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGtt > 1:1249698/1‑139 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa < 2:388687/110‑1 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa > 1:388687/1‑110 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 2:1475752/1‑118 (MQ=255) aTCCGGTGAAAGTGGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 1:1475752/118‑1 (MQ=255) tCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatcat < 2:1296477/139‑1 (MQ=255) tGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGGGCCTAAACGGCAGGGAAGGCCGCCCCGGA‑AGCGGGCGGCAGAAGGAATCAAAATTTTCAGGTCCAGCGGGCTGCAAGTTGCCGACCGTTAGAataatcagc > 2:233141/1‑136 (MQ=255) aTGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 2:1249698/139‑1 (MQ=255) tgtgGTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg > 1:50219/1‑139 (MQ=255) ggTCGGAAAACAAAGG‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa < 2:907948/97‑1 (MQ=255) ggTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa > 1:907948/1‑97 (MQ=255) ggcGGAAAACAAAGAGGGA‑A‑G‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAgg < 1:204386/46‑1 (MQ=37) gTCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAgg > 2:204386/1‑48 (MQ=255) tCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:1213944/1‑65 (MQ=255) tCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc < 2:1213944/65‑1 (MQ=255) tCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTc > 1:549874/1‑139 (MQ=255) tCGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTc > 2:1545121/1‑139 (MQ=255) tCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGGC‑CAAATCGGCAGGGAGGGCCGCCCAGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGCCGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTc > 2:1565061/1‑139 (MQ=255) cGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa < 2:649735/80‑1 (MQ=255) cGGAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa > 1:649735/1‑80 (MQ=255) gAAAACAAAGA‑GGA‑A‑AG‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTa < 2:50219/139‑1 (MQ=255) gAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGC‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATGGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCGGCCGGGCTGCAAGTTGCAGCCGGTTAAATTAATCGGTTGGGGTGCCGTAc > 2:1476710/1‑139 (MQ=255) aaaGA‑GGA‑A‑AGG‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 2:908486/95‑1 (MQ=255) aaaGA‑GGA‑A‑AGG‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCCCCCCGGATAGGGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 1:908486/1‑95 (MQ=255) | CTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGA‑GGA‑A‑A‑‑‑GGGGGGGGGG‑‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAC > NC_000913/379874‑380135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |